Search results for "Plant Roots"

showing 10 items of 229 documents

Sub-cellular proteomic analysis of a Medicago truncatula root microsomal fraction

2004

Since the last decade, Medicago truncatula has emerged as one of the model plants particularly investigated in the field of plant-microbe interactions. Several genetic and molecular approaches including proteomics have been developed to increase knowledge about this plant species. To complement the proteomic data, which have mainly focused on the total root proteins from M. truncatula, we carried out a sub-cellular approach to gain access to the total membrane-associated proteins. Following the setting up of the purification process, microsomal proteins were separated on 2-DE. Ninety-six out of the 440 well-resolved proteins were identified by MALDI-TOF peptide mass fingerprinting. A high p…

Proteomics0106 biological sciencesPlant ScienceFractionationHorticultureBiologyProteomicsPeptide MappingPlant Roots01 natural sciencesBiochemistry03 medical and health sciencesSymbiosisPeptide mass fingerprintingBotanyMedicagoElectrophoresis Gel Two-DimensionalSymbiosisMolecular Biology[SDV.BV.PEP] Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyComputingMilieux_MISCELLANEOUSPlant Proteins030304 developmental biology2. Zero hunger0303 health sciencesfungifood and beveragesGeneral Medicinebiology.organism_classificationMedicago truncatula[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyBiochemistryMicrosomePlant speciesProtein identification010606 plant biology & botanyPhytochemistry
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A proteomic approach to studying plant response to crenate broomrape (Orobanche crenata) in pea (Pisum sativum)

2004

Abstract Crenate broomrape ( Orobanche crenata ) is a parasitic plant that threatens legume production in Mediterranean areas. Pea ( Pisum sativum ) is severely affected, and only moderate levels of genetic resistance have so far been identified. In the present work we selected the most resistant accession available (Ps 624) and compared it with a susceptible (Messire) cultivar. Experiments were performed by using pot and Petri dish bioassays, showing little differences in the percentage of broomrape seed germination induced by both genotypes, but a significant hamper in the number of successfully installed tubercles and their developmental stage in the Ps 624 compared to Messire. The prote…

Proteomics0106 biological sciencesSilver StainingGenotypeParasitic plantNitrogen assimilationGene ExpressionPlant ScienceHorticultureOrobanche crenataPeptide MappingPlant Roots01 natural sciencesBiochemistryFructokinasePisum03 medical and health sciencesSativumGlutamine synthetaseElectrophoresis Gel Two-DimensionalDatabases ProteinMolecular Biology[SDV.BV.PEP] Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyComputingMilieux_MISCELLANEOUSPlant Proteins030304 developmental biologyPathogenesis-related protein2. Zero hunger0303 health sciencesbiologyOrobanchePeasGeneral Medicinebiology.organism_classification[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacyBiochemistrySpectrometry Mass Matrix-Assisted Laser Desorption-IonizationElectrophoresis Polyacrylamide Gel010606 plant biology & botany
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Identification of Trans-Golgi Network Proteins in Arabidopsis thaliana Root Tissue

2014

Knowledge of protein subcellular localization assists in the elucidation of protein function and understanding of different biological mechanisms that occur at discrete subcellular niches. Organelle-centric proteomics enables localization of thousands of proteins simultaneously. Although such techniques have successfully allowed organelle protein catalogues to be achieved, they rely on the purification or significant enrichment of the organelle of interest, which is not achievable for many organelles. Incomplete separation of organelles leads to false discoveries, with erroneous assignments. Proteomics methods that measure the distribution patterns of specific organelle markers along densit…

ProteomicsArabidopsis thalianaArabidopsisorganelle proteomicsProteomicsPlant RootsBiochemistryArticlesymbols.namesakeArtificial IntelligenceTandem Mass SpectrometryArabidopsisOrganelleArabidopsis thalianaChromatography Reverse-PhaseimmunoisolationbiologyArabidopsis Proteinstrans-Golgi networkGeneral ChemistryGolgi apparatusbiology.organism_classificationSubcellular localizationLOPITCell biologyIsobaric labelingphenoDiscomachine learningsymbolsIdentification (biology)Journal of Proteome Research
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Mutations in DMI3 and SUNN modify the appressorium-responsive root proteome in arbuscular mycorrhiza.

2006

Modification of the Medicago truncatula root proteome during the early stage of arbuscular mycorrhizal symbiosis was investigated by comparing, using two-dimensional electrophoresis, the protein patterns obtained from non-inoculated roots and roots synchronized for Glomus intraradices appressorium formation. This approach was conducted in wild-type (J5), mycorrhiza-defective (TRV25, dmi3), and autoregulation-defective (TR122, sunn) M. truncatula genotypes. The groups of proteins that responded to appressorium formation were further compared between wild-type and mutant genotypes; few overlaps and major differences were recorded, demonstrating that mutations in DMI3 and SUNN modified the ap…

ProteomicsTime FactorsProteomePhysiologyMutantGenes PlantPlant RootsMass SpectrometryMycorrhizaeBotanyMedicago truncatulaPlant defense against herbivoryElectrophoresis Gel Two-DimensionalMycorrhizaSymbiosisCyclophilinPlant ProteinsAppressoriumbiologyfungiGeneral Medicinebiology.organism_classificationMedicago truncatulaCell biologyArbuscular mycorrhizaProteomeMutationAgronomy and Crop ScienceMolecular plant-microbe interactions : MPMI
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Chemical composition and antibacterial activity of essential oil of Pulicaria odora L.

2004

The chemical composition of the volatile oil constituent from Pulicaria odora L. roots has been analyzed by GC/MS. Twenty-seven components were identified, being thymol (47.83%) and its derivative isobutyrate (30.05%) the main constituents in the oil. Furthermore, the oil was tested against seven bacteria at different concentrations. Results showed that the oil exhibited a significant antibacterial activity.

Pulicaria odoraMicrobial Sensitivity TestsPharmacognosyAsteraceaeGram-Positive BacteriaPlant RootsGas Chromatography-Mass Spectrometrylaw.inventionchemistry.chemical_compoundlawDrug DiscoveryBotanyGram-Negative BacteriaOils VolatilePlant OilsFood scienceThymolChemical compositionEssential oilAntibacterial agentPharmacologyPlants Medicinalbiologybiology.organism_classificationThymolAnti-Bacterial AgentschemistryAntibacterial activityBacteriaJournal of ethnopharmacology
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Symbiotic N2 fixation activity in relation to C economy of Pisum sativum L. as a function of plant phenology

2003

The relationships between symbiotic nitrogen fixation (SNF) activity and C fluxes were investigated in pea plants (Pisum sativum L. cv. Baccara) using simultaneous 13 C and 15 N labelling. Analysis of the dynamics of labelled CO 2 efflux from the nodulated roots allowed the different components associated with SNF activity to be calculated, together with root and nodule synthetic and maintenance processes. The carbon costs for the synthesis of roots and nodules were similar and decreased with time. Carbon lost by turnover, associated with maintenance processes, decreased with time for nodules while it increased in the roots. Nodule turnover remained higher than root turnover until flowering…

RhizobiaceaeTime FactorsPhysiologyPlant ScienceBiologymedicine.disease_causePlant RootsRhizobium leguminosarumPisum[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/BotanicsSativumOxygen ConsumptionSymbiosisNitrogen FixationBotanymedicineSymbiosisComputingMilieux_MISCELLANEOUSRhizobium leguminosarumfungiPeasfood and beverages[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanicsbiology.organism_classificationIsotopes of nitrogenKineticsNitrogen fixationSpecific activitySeasons
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Influence of arbuscular mycorrhizal colonisation on cadmium induced Medicago truncatula root isoflavonoid accumulation.

2012

Cadmium is a serious environmental pollution threats to the planet. Its accumulation in plants affects many cellular functions, resulting in growth and development inhibition, whose mechanisms are not fully understood. However, some fungi forming arbuscular mycorrhizal symbiosis with the majority of plant species have the capacity to buffer the deleterious effect of this heavy metal. In the present work we investigated the capacity of Rhizophagus irregularis (syn. Glomus irregularis) to alleviate cadmium stress in Medicago truncatula. In spite of a reduction in all mycorrhizal parameters, plants colonized for 21 days by R. irregularis and treated by 2 mg kg(-1) cadmium displayed less growth…

Rhizophagus irregularisCoumestrolPterocarpansPhysiology[SDV]Life Sciences [q-bio]chemistry.chemical_elementmycorrhizaDown-RegulationEnvironmental pollutionPlant SciencePlant Rootschemistry.chemical_compoundSoilIsoflavonoidGlucosidesGene Expression Regulation PlantMycorrhizaeBotanyMedicago truncatulaGeneticsMedicarpinBiomassMycorrhizaheavy metalsGlomeromycotaSymbiosisGlomusPlant ProteinsCadmiumbiologyfungifood and beveragesbiology.organism_classificationisoflavonoidsIsoflavonesMedicago truncatulaAlcohol Oxidoreductaseschemistry[SDE]Environmental Sciencesleguminous plantsPlant ShootsCadmiumPlant physiology and biochemistry : PPB
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Variations in the concentrations of macro- and trace elements in two grasses and in the rhizosphere soil during a day

2019

The aim of the research was to study short-term variations in concentrations of 17 elements in two widely distributed natural plant species (couch grass and plantain) and in the rhizosphere soil of the plants. The plant and soil samples were collected in a field from a small site over a daytime. In the course of the day, the variations of the total amounts of C, N, and H in the rhizosphere soil were rather marked and different for the soils taken from roots of plantain and couch grass. The concentrations of some other elements in the rhizosphere soil of the plants varied in a similar way. The short-term variations of element concentrations in roots and leaves of the plants were also rather …

Rhizosphere010504 meteorology & atmospheric sciencesSoil testHealth Toxicology and Mutagenesisfungifood and beveragesGeneral Medicine010501 environmental sciencesBiologyPoaceaeToxicologyPlant Roots01 natural sciencesPollutionTrace ElementsSoilHorticultureNutrientRhizosphereSoil waterPlant speciesSoil Pollutants0105 earth and related environmental sciencesEnvironmental Pollution
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ITS region of the rDNA of Pythium rhizosaccharum sp. nov. isolated from sugarcane roots: taxonomy and comparison with related species.

2003

Pythium rhizosaccharum (F-1244) was isolated from soil samples taken in the rhizosphere of sugarcane (Saccharum officinarum) in the north-eastern India. This species is characterized by its smooth-walled, spherical sporangia and rarely formed sexual structures. When formed, the antheridial branches wrap around the oogonia and soon disappear after fertilization. The internal transcribed spacer (ITS) region of its rDNA is comprised of 904 bases. The taxonomical description of this new species and its comparison with related species are given here, together with the nucleotide sequences of the ITS1 and ITS2, and the 5.8S gene of its ribosomal nuclear DNA.

RhizospherebiologyBase SequenceSporangiumMolecular Sequence DataPythiumRibosomal RNAbiology.organism_classificationMicrobiologyDNA RibosomalPlant RootsSaccharumSaccharum officinarumSequence Homology Nucleic AcidBotanyDNA Ribosomal SpacerGeneticsTaxonomy (biology)PythiumInternal transcribed spacerDNA FungalMolecular BiologyRibosomal DNASoil MicrobiologyFEMS microbiology letters
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Bradyrhizobium sp. nodulating the Mediterranean shrub Spanish broom (Spartium junceum L.)

2002

Aims: The molecular diversity of 25 strains of rhizobia, isolated in Sicily from root nodules of the Mediterranean shrubby legume Spanish broom (Spartium junceum L.), is presented in relation to the known rhizobial reference strains. Methods and Results: Our approach to the study of the S. junceum rhizobial diversity combined the information given by the 16S and the intergenic spacer (IGS) 16S–23S rDNA polymorphic region by obtaining them in a single polymerase chain reaction (PCR) step. The PCR fragment size of the S. junceum isolates was 2400–2500 bp and that of the reference strains varied from 2400 in Bradyrhizobium strains to 2800 in Sinorhizobium strains. Inter- and intrageneric lengt…

Root noduleMolecular Sequence DataSpartiummedicine.disease_causePlant RootsPolymerase Chain ReactionApplied Microbiology and BiotechnologyBradyrhizobiumRhizobium leguminosarumRhizobiaRNA Ribosomal 16SBotanymedicineBradyrhizobiumRibosomal DNAPhylogenyGeneticsbiologyfood and beveragesFabaceaeSequence Analysis DNAGeneral Medicinebiochemical phenomena metabolism and nutritionbiology.organism_classificationSinorhizobiumDNA IntergenicRestriction fragment length polymorphismPolymorphism Restriction Fragment LengthBiotechnology
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