Search results for "Plasmids"

showing 10 items of 209 documents

Role of Bacillus thuringiensis Cry1A toxins domains in the binding to the ABCC2 receptor from Spodoptera exigua

2018

Abstract Cry proteins from Bacillus thuringiensis (Bt) have been used to control insect pests either as formulated sprays or as in Bt-crops. However, field-evolved resistance to Bt proteins is threatening the long-term use of Bt products. The SeABCC2 locus has been genetically linked to resistance to a Bt bioinsecticide (Xentari™) in Spodoptera exigua (a mutation producing a truncated form of the transporter lacking an ATP binding domain was found in the resistant insects). Here, we investigated the role of SeABCC2 in the mode of action of Cry1Aa, Cry1Ab, Cry1Ac, Cry1Ca, and two Cry1A-1Ca hybrids by expressing the receptor in Sf21 and HEK293T cell lines. Cell toxicity assays showed that Sf2…

0106 biological sciences0301 basic medicineCell SurvivalBacillus thuringiensisGene ExpressionSpodopteraSpodopteraTransfection01 natural sciencesBiochemistryHemolysin ProteinsStructure-Activity Relationship03 medical and health sciencesBacterial ProteinsProtein DomainsBacillus thuringiensisExiguaSf9 CellsAnimalsHumansProtein IsoformsBinding siteReceptorMolecular BiologySf21Binding SitesBacillus thuringiensis Toxinsbiologyfungibiology.organism_classificationMultidrug Resistance-Associated Protein 2Recombinant ProteinsClone CellsEndotoxins010602 entomologyHEK293 Cells030104 developmental biologyBiochemistryCry1AcLarvaInsect ScienceMutationInsect ProteinsMultidrug Resistance-Associated ProteinsPlasmidsProtein BindingBinding domainInsect Biochemistry and Molecular Biology
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Conjugation is necessary for a bacterial plasmid to survive under protozoan predation

2016

Horizontal gene transfer by conjugative plasmids plays a critical role in the evolution of antibiotic resistance. Interactions between bacteria and other organisms can affect the persistence and spread of conjugative plasmids. Here we show that protozoan predation increased the persistence and spread of the antibiotic resistance plasmid RP4 in populations of the opportunist bacterial pathogenSerratia marcescens. A conjugation-defective mutant plasmid was unable to survive under predation, suggesting that conjugative transfer is required for plasmid persistence under the realistic condition of predation. These results indicate that multi-trophic interactions can affect the maintenance of con…

0106 biological sciences0301 basic medicineFood ChainMutant010603 evolutionary biology01 natural sciencesRP4 plasmidPredationMicrobiologyTetrahymena thermophila03 medical and health sciencesPlasmidAntibiotic resistanceevolution of antibiotic resistance/dk/atira/pure/subjectarea/asjc/1100PathogenSerratia marcescens/dk/atira/pure/subjectarea/asjc/1100/1101Evolutionary BiologybiologyAgricultural and Biological Sciences(all)Conjugationta1183ta1182biology.organism_classificationAgricultural and Biological Sciences (miscellaneous)Protozoan predation030104 developmental biologyprotozoan predationConjugation GeneticSerratia marcescensHorizontal gene transferta1181Evolution of antibiotic resistanceGeneral Agricultural and Biological SciencesBacteriaconjugationPlasmids
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Boolean computation in plants using post-translational genetic control and a visual output signal

2018

[EN] Due to autotrophic growing capacity and extremely rich secondary metabolism, plants should be preferred targets of synthetic biology. However, developments in plants usually run below those in other taxonomic groups. In this work we engineered genetic circuits capable of logic YES, OR and AND Boolean computation in plant tissues with a visual output signal. The circuits, which are deployed by means of Agrobacterium tumefaciens, perform with the conditional activity of the MYB transcription factor Roseal from Antirrhinum majus inducing the accumulation of anthocyanins, plant endogenous pigments that are directly visible to the naked eye or accurately quantifiable by spectrophotometric a…

0106 biological sciences0301 basic medicineProteasesmedicine.medical_treatmentRecombinant Fusion ProteinsPotyvirusBiomedical EngineeringAgrobacterium01 natural sciencesBiochemistry Genetics and Molecular Biology (miscellaneous)Anthocyanins03 medical and health sciencesViral ProteinsAntirrhinum majusAnthocyanins Biological computingmedicineAntirrhinumMYBSecondary metabolismTranscription factorSynthetic biologyPlant ProteinsProteasebiologyfungiPotyvirusfood and beveragesGeneral MedicineAgrobacterium tumefaciensbiology.organism_classificationPlants Genetically ModifiedCell biologyGENETICA030104 developmental biologySpectrophotometryGenetic circuitsPotyvirus proteaseSynthetic BiologyProtein Processing Post-Translational010606 plant biology & botanyPeptide HydrolasesPlasmidsTranscription Factors
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Symptom severity, infection progression and plant responses in solanum plants caused by three pospiviroids vary with the inoculation procedure

2021

This article belongs to the Section Molecular Plant Sciences.

0106 biological sciences0301 basic medicineViroidvirusesPospiviroidaeCEVd01 natural sciencesRibosome18S ribosomal RNAAgro-infiltrationSolanum lycopersicumBiology (General)Spectroscopyfood and beveragesGeneral MedicinePSTVdTranscriptRibosomeViroidsComputer Science Applications02.- Poner fin al hambre conseguir la seguridad alimentaria y una mejor nutrición y promover la agricultura sostenibleChemistryRNA ViralPlasmidsQH301-705.5PospiviroidaeBiologyEggplantStressArticleCatalysisTomatoMicrobiologyInorganic Chemistry03 medical and health sciencesBIOQUIMICA Y BIOLOGIA MOLECULARPhysical and Theoretical ChemistryQD1-999Molecular BiologyPotato spindle tuber viroidPlant DiseasesInoculationOrganic ChemistryfungiRibosomal RNAbiology.organism_classification030104 developmental biologyTCDVdSolanumRibosomes010606 plant biology & botany
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Chromosome-Encoded Hemolysin, Phospholipase, and Collagenase in Plasmidless Isolates of Photobacterium damselae subsp. damselae Contribute to Virulen…

2017

ABSTRACT Photobacterium damselae subsp. damselae is a pathogen of marine animals, including fish of importance in aquaculture. The virulence plasmid pPHDD1, characteristic of highly hemolytic isolates, encodes the hemolysins damselysin (Dly) and phobalysin (PhlyP). Strains lacking pPHDD1 constitute the vast majority of the isolates from fish outbreaks, but genetic studies to identify virulence factors in plasmidless strains are scarce. Here, we show that the chromosome I-encoded hemolysin PhlyC plays roles in virulence and cell toxicity in pPHDD1-negative isolates of this pathogen. By combining the analyses of whole genomes and of gene deletion mutants, we identified two hitherto uncharacte…

0301 basic medicine030106 microbiologyVirulenceGenetics and Molecular BiologyBiologyHemolysin ProteinsApplied Microbiology and BiotechnologyMicrobiology03 medical and health sciencesFish DiseasesHemolysin ProteinsPlasmidAnimalsCollagenasesPathogenEcologyVirulencePhotobacteriumHemolysinChromosomes BacterialPhotobacteriumbiology.organism_classification030104 developmental biologyPhotobacterium damselaePhospholipasesBassGram-Negative Bacterial InfectionsLecithinaseFood ScienceBiotechnologyPlasmidsApplied and environmental microbiology
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Large-scale identification of functional microRNA targeting reveals cooperative regulation of the hemostatic system.

2018

Essentials MicroRNAs (miRNAs) regulate the molecular networks controlling biological functions such as hemostasis. We utilized novel methods to analyze miRNA-mediated regulation of the hemostatic system. 52 specific miRNA interactions with 11 key hemostatic associated genes were identified. Functionality and drugability of miRNA-19b-3p against antithrombin were demonstrated in vivo. SUMMARY: Background microRNAs (miRNAs) confer robustness to complex molecular networks regulating biological functions. However, despite the involvement of miRNAs in almost all biological processes, and the importance of the hemostatic system for a multitude of actions in and beyond blood coagulation, the role o…

0301 basic medicineComputational biologyBiologyAntithrombinsHemostatics03 medical and health sciencesMiceCell Line TumormicroRNAGene silencingAnimalsHumansGene SilencingBiomarker discoveryGene3' Untranslated RegionsHemostasisThree prime untranslated regionRNARobustness (evolution)Computational BiologyHigh-Throughput Nucleotide SequencingThrombosisHematologyMice Inbred C57BLMicroRNAs030104 developmental biologyHemostasisBiomarkersPlasmidsJournal of thrombosis and haemostasis : JTH
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Expanding the toolbox for Synechocystis sp. PCC 6803 : validation of replicative vectors and characterization of a novel set of promoters

2018

Cyanobacteria are promising ‘low-cost’ cell factories since they have minimal nutritional requirements, high metabolic plasticity and can use sunlight and CO2 as energy and carbon sources. The unicellular Synechocystis sp. PCC 6803, already considered the ‘green’ Escherichia coli, is the best studied cyanobacterium but to be used as an efficient and robust photoautotrophic chassis it requires a customized and well-characterized toolbox. In this context, we evaluated the possibility of using three self-replicative vectors from the Standard European Vector Architecture (SEVA) repository to transform Synechocystis. Our results demonstrated that the presence of the plasmid does not lead to an e…

0301 basic medicineCyanobacteriapSEVA plasmids030106 microbiologyBiomedical EngineeringHeterologouspromotersBioengineeringContext (language use)Computational biologymedicine.disease_causecyanobacteriaBiomaterials03 medical and health sciencesPlasmidmedicineEscherichia coliGeneQH426synthetic toolboxbiologyChemistrySynechocystisSynechocystisPromoterbiology.organism_classificationAgricultural and Biological Sciences (miscellaneous)3. Good health030104 developmental biologyBiotechnologyResearch Article
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Extraintestinal pathogenic Escherichia coli sequence type 131 H30-R and H30-Rx subclones in retail chicken meat, Italy

2016

Extraintestinal pathogenic Escherichia coli sequence type 131 (ST131), typically fluoroquinolone-resistant (FQ-R) and/or extended-spectrum β-lactamase (ESBL)-producing, has emerged globally. Among clinical isolates, ST131, primarily its H30-R and H30-Rx subclones, accounts for most antimicrobial-resistant E. coli and is the dominant E. coli strain worldwide. We assessed its prevalence and characteristics among raw chicken meat samples on sale in Palermo, Italy. A collection of 237 fluoroquinolone resistant and ESBL/AmpC producing E. coli isolates, which had been isolated from processed retail chicken meat in the period May 2013-April 2015, was analyzed. Established polymerase chain reaction…

0301 basic medicineFimH30MeatAFLPST131Settore MED/17 - Malattie InfettiveAnimal foodExtraintestinal Pathogenic Escherichia colichicken030106 microbiologyBiologySettore MED/42 - Igiene Generale E ApplicataMicrobiologyH30-RxMicrobiologylaw.invention03 medical and health sciencesColi strainQuinolone resistanceChicken meatlawDrug Resistance BacterialAnimalsEscherichia coli sequence type 131Amplified Fragment Length Polymorphism AnalysisSafety Risk Reliability and QualityhumansPolymerase chain reactionPhylogenyExPECExtraintestinal Pathogenic Escherichia coliPhylogenetic treeGenetic heterogeneityE. coliGeneral Medicineβ-lactamaseItalyESBLFood MicrobiologyAFLP; Chicken meat; E. coli; ESBL; ExPEC; FimH30; H30-R; H30-Rx; ST131; Food Science; Microbiology; Safety Risk Reliability and QualityE.coliAmplified fragment length polymorphismChickensH30-RFluoroquinolonesPlasmidsFood Science
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Conjugative ESBL plasmids differ in their potential to rescue susceptible bacteria via horizontal gene transfer in lethal antibiotic concentrations.

2017

Conjugative ESBL plasmids differ in their potential to rescue susceptible bacteria via horizontal gene transfer in lethal antibiotic concentrations

0301 basic medicineGene Transfer Horizontalmedicine.drug_classAntiparasitic030106 microbiologyAntibioticsGene transferDrug resistanceBiologybeta-LactamasesMicrobiology03 medical and health sciencesplasmiditPlasmidDrug DiscoveryDrug Resistance Bacterialpolycyclic compoundsmedicineEscherichia coliHumansantimicrobial resistanceEscherichia coli InfectionsPharmacologyta1182biochemical phenomena metabolism and nutritionbacterial infections and mycosesbiology.organism_classificationGlycopeptide3. Good healthAnti-Bacterial Agentsbacterial conjugationHorizontal gene transferhorizontal gene transferhorisontaalinen geeninsiirtoBacteriaPlasmidsThe Journal of antibiotics
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New ΦBT1 site-specific integrative vectors with neutral phenotype in Streptomyces.

2016

Integrative plasmids are one of the best options to introduce genes in low copy and in a stable form into bacteria. The ΦC31-derived plasmids constitute the most common integrative vectors used in Streptomyces. They integrate at different positions (attB and pseudo-attB sites) generating different mutations. The less common ΦBT1-derived vectors integrate at the unique attB site localized in the SCO4848 gene (S. coelicolor genome) or their orthologues in other streptomycetes. This work demonstrates that disruption of SCO4848 generates a delay in spore germination. SCO4848 is co-transcribed with SCO4849, and the spore germination phenotype is complemented by SCO4849. Plasmids pNG1-4 were crea…

0301 basic medicineGenetics Microbial030106 microbiologyGenetic VectorsSettore BIO/19 - Microbiologia GeneraleGenomeStreptomycesApplied Microbiology and Biotechnology03 medical and health sciencesPlasmidAmp resistanceSpore germinationEscherichia coliNeutral phenotypeBacteriophagesVector (molecular biology)GeneMolecular BiologyGeneticsRecombination GeneticbiologyfungiGeneral Medicinebiology.organism_classificationPhenotypeΦBT1 integrative vectorStreptomyces030104 developmental biologyPhenotypeStreptomyceHeterologous expression; Neutral phenotype; Streptomyces; ΦBT1 integrative vector; Biotechnology; Applied Microbiology and BiotechnologyHeterologous expressionBiotechnologyPlasmidsApplied microbiology and biotechnology
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