Search results for "Potential energy surface"

showing 2 items of 82 documents

Conformational equilibrium of chorismate. A QM/MM theoretical study combining statistical simulations and geometry optimisations in gas phase and in …

2003

We report a theoretical study on the conformational equilibrium of chorismate that precedes its rearrangement to prephenate, an important enzyme-catalyzed reaction. In first place we show that the usual classification of chorismate conformers based on the relative position of the hydroxyl and ether bridge, pseudo-diaxial and pseudo-diequatorial, is not the only relevant factor from the point of view of the a posteriori rearrangement. Here we also analyse another complementary geometrical classification based on the interatomic distance between the carbon atoms to be bounded. Using the umbrella sampling approach and this distance as distinguished internal reaction coordinate, the gas phase A…

education.field_of_studyChemistryPopulationThermodynamicsDihedral angleCondensed Matter PhysicsBiochemistryReaction coordinateFree energy perturbationQM/MMComputational chemistryPotential energy surfacePhysical and Theoretical ChemistryUmbrella samplingeducationConformational isomerismJournal of Molecular Structure: THEOCHEM
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Saddle index properties, singular topology, and its relation to thermodynamic singularities for aϕ4mean-field model

2004

We investigate the potential energy surface of a ${\ensuremath{\phi}}^{4}$ model with infinite range interactions. All stationary points can be uniquely characterized by three real numbers ${\ensuremath{\alpha}}_{+},{\ensuremath{\alpha}}_{0},{\ensuremath{\alpha}}_{\ensuremath{-}}$ with ${\ensuremath{\alpha}}_{+}+{\ensuremath{\alpha}}_{0}+{\ensuremath{\alpha}}_{\ensuremath{-}}=1$, provided that the interaction strength $\ensuremath{\mu}$ is smaller than a critical value. The saddle index ${n}_{s}$ is equal to ${\ensuremath{\alpha}}_{0}$ and its distribution function has a maximum at ${n}_{s}^{\mathrm{max}}=1∕3$. The density $p(e)$ of stationary points with energy per particle $e$, as well as…

symbols.namesakeDistribution functionMean field theoryEuler characteristicPotential energy surfaceZero (complex analysis)symbolsGround stateTopologyEnergy (signal processing)Real numberMathematicsPhysical Review E
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