Search results for "QPCR"

showing 10 items of 65 documents

Do shifts in life strategies explain microbial community responses to increasing nitrogen in tundra soil?

2016

Subarctic tundra soils store large quantities of the global organic carbon (C) pool as the decomposition of plant litter and soil organic matter is limited by low temperatures and limiting nutrients. Mechanisms that drive organic matter decomposition are still poorly understood due to our limited knowledge of microbial communities and their responses to changing conditions. In subarctic tundra large grazers, in particular reindeer, exert a strong effect on vegetation and nutrient availability causing drastic nutrient pulses in the soils located along the migratory routes. Here we studied the effect of increased nitrogen (N) availability on microbial community structure and activities by lab…

0301 basic medicinetundraSoil ScienceBiologyMicrobiologynitrogen03 medical and health sciencestyppiNutrientOrganic matternext generation sequencing2. Zero hungerchemistry.chemical_classificationBiomass (ecology)EcologySoil organic matterta118304 agricultural and veterinary sciences15. Life on landPlant litterbacterial communitiesTundraqPCR030104 developmental biologyenzyme activitieschemistryMicrobial population biologyPLFA040103 agronomy & agricultureta11810401 agriculture forestry and fisheriesMicrocosmSoil Biology and Biochemistry
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Ecological role of mycotoxins produced by Fusarium graminearum : consequences of the presence of deoxynivalenol (DON) in crop residues on the soil mi…

2012

Fusarium graminearum is a plant pathogenic fungus, causing devastating disease “Fusarium head blight” (FHB) in cereals including wheat and maize. It also contaminates the grains with mycotoxins including deoxynivalenol (DON) which are toxic to human and animals. This disease has resulted in the serious losses in grain yield and quality. We established through a first bibliographic review that during off season fungus survives saprophytically on the crop residues (ecological habitat) and serves as primary inoculum for the next season crop. However, we noticed also that the literature was poor about the role mycotoxins could play in the establishment of F. graminearum in such a habitat. The m…

[SDV.SA]Life Sciences [q-bio]/Agricultural sciencesCrop residuesPreceding cropsoil tillageRésidus de culturesoil microbial community structureEcological requirements[ SDV.EE ] Life Sciences [q-bio]/Ecology environmentsaprophytic abilityTillagequantitative polymerase chain reaction (qPCR)population dynamicsecological nicheearthwormSaprotrophic development[ SDV.SA ] Life Sciences [q-bio]/Agricultural sciences[SDV.EE]Life Sciences [q-bio]/Ecology environment[SDV.SA] Life Sciences [q-bio]/Agricultural scienceswheat strawWheat diseasesFusarium Head Blight (FHB)Mycotoxins[SDV] Life Sciences [q-bio]terminal restriction fragment length polymorphism (TRFLP)Habitat[SDV.EE] Life Sciences [q-bio]/Ecology environmenthigh performance liquid chromatography (HPLC)Soil microbial ecologyamensalism
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The LepR-mediated leptin transport across brain barriers controls food reward

2018

Objective Leptin is a key hormone in the control of appetite and body weight. Predominantly produced by white adipose tissue, it acts on the brain to inhibit homeostatic feeding and food reward. Leptin has free access to circumventricular organs, such as the median eminence, but entry into other brain centers is restricted by the blood–brain and blood–CSF barriers. So far, it is unknown for which of its central effects leptin has to penetrate brain barriers. In addition, the mechanisms mediating the transport across barriers are unclear although high expression in brain barriers suggests an important role of the leptin receptor (LepR). Methods We selectively deleted LepR in brain endothelia…

Male0301 basic medicineLeptinHFD high-fat dietEndothelial cellsWhite adipose tissueCSF cerebrospinal fluidMice0302 clinical medicineCPP conditioned place preferenceBBB blood–brain barrierCells Culturedmedia_commonLeptindigestive oral and skin physiologyi.p. intraperitonealmedicine.anatomical_structureLepRBlood-Brain BarrierBlood–brain barrier; Endothelial cells; LepR; Leptin; Obesity; RewardMedian eminenceqPCR quantitative polymerase chain reactionReceptors LeptinOriginal ArticleChoroid plexusmedicine.medical_specialtylcsh:Internal medicinemedia_common.quotation_subjectHyperphagiaBiologyBlood–brain barrierVTA ventral tegmental areaBC bottle choice testCapillary PermeabilityBlood–brain barrierARC arcuate nucleus03 medical and health sciencesPBS phosphate buffered salineRewardInternal medicinemedicineAnimalsObesitylcsh:RC31-1245Molecular BiologyCircumventricular organsBlood-Nerve BarrierLeptin receptorNCD normal chow dietAppetiteCell Biology030104 developmental biologyEndocrinologyLepR leptin receptorChoroid PlexusBSA bovine serum albuminPFA paraformaldehyde030217 neurology & neurosurgeryDAPI 4′6-diamidino-2-phenylindoleMolecular Metabolism
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Hepatitis E virus in lettuce and water samples: A method-comparison study

2017

The hepatitis E virus (HEV), which is an increasing cause of acute viral hepatitis in Europe, is a zoonotic virus that is mainly transmitted through contaminated water, consumption of raw or undercooked meat from pigs or wild boar, blood transfusion, and organ transplantation. Although the role of HEV transmission through contaminated produce has not been confirmed, the presence of HEV has been reported in irrigation waters and in vegetables. The present study used a World Health Organization (WHO) international standard and clinical samples to evaluate the performance characteristics of three RT-qPCR assays for detection and quantification of HEV. Two of the evaluated assays provided good …

0301 basic medicineVeterinary medicineIrrigationMeatSwine030106 microbiologySewageReal-Time Polymerase Chain Reactionmedicine.disease_causeMicrobiology03 medical and health sciencesWild boarHepatitis E virusSpinacia oleraceabiology.animalPepperVegetablesHepatitis E virusmedicineAnimalsHumansDetection limitbiologySewagebusiness.industryWater PollutionRT-qPCRGeneral MedicineLettuceContaminationIrrigation watermedicine.diseaseHepatitis EEuropeHEVRNA ViralCapsicumViral hepatitisbusinessFoodborne virusFood Science
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Effetto combinato di cadmio e sulfonammidici sullo sviluppo degli embrioni di riccio di mare: un'indagine molecolare

2013

riccio di mare; cadmio; sulfonammidici; Rt-qPCRsulfonammidiciRt-qPCRriccio di mareSettore BIO/11 - Biologia Molecolarecadmio
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Polyoxypregnanes as safe, potent, and specific ABCB1-inhibitory pro-drugs to overcome multidrug resistance in cancer chemotherapy in vitro and in vivo

2021

Multidrug resistance (MDR) mediated by ATP binding cassette subfamily B member 1 (ABCB1) is significantly hindering effective cancer chemotherapy. However, currently, no ABCB1-inhibitory drugs have been approved to treat MDR cancer clinically, mainly due to the inhibitor specificity, toxicity, and drug interactions. Here, we reported that three polyoxypregnanes (POPs) as the most abundant constituents of Marsdenia tenacissima (M. tenacissima) were novel ABCB1-modulatory pro-drugs, which underwent intestinal microbiota-mediated biotransformation in vivo to generate active metabolites. The metabolites at non-toxic concentrations restored chemosensitivity in ABCB1-overexpressing cancer cells v…

ABCC1 ATP binding cassette subfamily C member 1IC50 half maximal inhibitory concentrationMultidrug resistancePharmacologyNADPH reduced nicotinamide adenine dinucleotide phosphateF bioavailabilitychemistry.chemical_compoundPCR polymerase chain reaction0302 clinical medicineMDR multidrug resistanceECL electrochemiluminescencet1/2 elimination half-lifeLC–MS liquid chromatography coupled with mass spectrometryN.D. not detectedGeneral Pharmacology Toxicology and PharmaceuticsBBB blood–brain barriermedia_commonATF3 activating transcription factor 30303 health sciencesChemistryABC ATP-binding cassetteNMPA National Medical Products AdministrationPXR pregnane X receptorSDS-PAGE sodium dodecyl sulfate-polyacrylamide gel electrophoresisHBSS Hankʹs balanced salt solutionABCB1Combination chemotherapyProdrugMarsdenia tenacissimaCmax peak concentrationPaclitaxelGAPDH glyceraldehyde-3-phosphate dehydrogenase030220 oncology & carcinogenesisBHI brain heart infusionOriginal ArticleAUC0–∞ area under plasma concentration vs. time curveMRT mean residence timeDrugmedia_common.quotation_subjectRM1-950Vd volume of distributionABCB1 ATP binding cassette subfamily B member 1UIC-2 mouse monoclonal ABCB1 antibodyABCG2 ATP binding cassette subfamily G member 2Combination chemotherapyCYP cytochrome P450 isozymePI propidium iodideTEER transepithelial electrical resistance03 medical and health sciencesPBS phosphate buffer salineFBS fetal bovine serumDox doxorubicinIn vivoPOP polyoxypregnanemedicine030304 developmental biologyEVOM epithelial tissue voltohmmeterTmax time for peak concentrationCancerLBE lowest binding energyPE phycoerythrinmedicine.diseaseMultiple drug resistancePolyoxypregnanePapp apparent permeabilityN.A. not applicableCancer cellH&E hematoxylin and eosinMDR1a multidrug resistance protein 1aTherapeutics. PharmacologyqPCR quantitative PCRM. tenacissima Marsdenia tenacissimaCL clearanceSD standard derivationActa Pharmaceutica Sinica B
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RNA-seq transcriptome analysis provides candidate genes for resistance to Tomato leaf cur New Delhi virus in melon

2022

[EN] Tomato leaf curl New Delhi virus (ToLCNDV) emerged in the Mediterranean Basin in 2012 as the first DNA bipartite begomovirus (Geminiviridae family), causing severe yield and economic losses in cucurbit crops. A major resistance locus was identified in the wild melon accession WM-7 (Cucumis melo kachri group), but the mechanisms involved in the resistant response remained unknown. In this work, we used RNA-sequencing to identify disease-associated genes that are differentially expressed in the course of ToLCNDV infection and could contribute to resistance. Transcriptomes of the resistant WM-7 genotype and the susceptible cultivar Piñonet Piel de Sapo (PS)(C. melo ibericus group) in ToLC…

ToLCNDV resistancetranscriptome (RNA-seq)food and beveragesqPCR (quantitative polymerase chain reaction)Plant cultureMicrobiologiaMelon (Cucumis melo L.)DEG (differentially expressed genes)Plant ScienceEcologia agrícolaSB1-1110Ecologia02.- Poner fin al hambre conseguir la seguridad alimentaria y una mejor nutrición y promover la agricultura sostenibleQPCR (quantitative polymerase chain reaction)GENETICATranscriptome (RNA-seq)melon (Cucumis melo L.)
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Prevalence of Mycobacterium bovis in agroecosystems : analysis of potential environmental reservoirs (soil, fresh water, soil fauna and aquatic fauna…

2016

Bovine tuberculosis is an infectious disease caused by Mycobacterium bovis. This disease affects cattle, and many species of domestic and wild mammals, and humans. The circulation of the bacteria in various multi-host systems promotes the maintenance of the disease and the contamination of cattle in the vicinity. Beside direct transmission of the bacteria through the respiratory route, indirect transmission, through inhalation or ingestion of environmental matrices contaminated by an infected animal excretory, is suspected in several countries. Environmental contamination with M. bovis appears to be a crucial factor in the persistence of the infection in multi-host systems.In Côte d'Or, a F…

Sol[SDV.BA] Life Sciences [q-bio]/Animal biologyBovinsCultureWaterEnvironmentWildlifeMycobacterium bovisFaune sauvageQPCREnvironnementSoilFecesEauCattle[SDV.MP.BAC] Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology
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Seasonal and spatial dynamics of enteric viruses in wastewater and in riverine and estuarine receiving waters

2018

International audience; Enteric viruses represent a global public health threat and are implicated in numerous foodborne andwaterborne disease outbreaks. Nonetheless, relatively little is known of their fate and stability in the environment. In this studywe used carefully validatedmethods tomonitor enteric viruses, namely adenovirus (AdV), JC polyomavirus (JCV), noroviruses (NoVs), sapovirus (SaV) and hepatitis A and E viruses (HAV and HEV) fromwastewater source to beaches and shellfish beds. Wastewater influent and effluent, surface water, sediment and shellfish samples were collected in the Conwy catchment (North Wales, UK) once a month for one year. High concentrations of AdV and JCV wer…

0301 basic medicineVeterinary medicineviruses010501 environmental sciencesWastewater01 natural sciencesWaste Disposal Fluid[SDV.IDA]Life Sciences [q-bio]/Food engineeringhuman adenovirusWaste Management and Disposalmurine norovirusbiologyhepatitis-eWaterborne diseasesvirus diseasesContaminationHepatitis EPollution6. Clean water3. Good healthqPCRWastewaterHealthdiverse microbes[SDV.MP.VIR]Life Sciences [q-bio]/Microbiology and Parasitology/VirologySeasonsWater MicrobiologyTangential flow ultrafiltrationEnvironmental MonitoringPorcine gastric mucin assayEnvironmental Engineering030106 microbiologydrinking-waterblood group antigensViral survival03 medical and health sciencesEnteric virus trackingmedicineEnvironmental ChemistryEffluentShellfish0105 earth and related environmental scienceshuman polyomavirusviral gastroenteritisWater PollutionOutbreakSapovirusFaecal contaminationbiology.organism_classificationmedicine.diseaseBiology and Microbiologyporcine gastric mucinsimultaneous recovery
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Bioaugmentācijas izmantošana farmācijas notekūdeņu attīrīšanas efektivitātes uzlabošanai

2015

Šajā darbā tika pētīta no farmācijas attīrīšanas iekārtām izdalītu, dabisku mikroorganismu spēja degradēt specifiskus farmakoloģijas savienojumus tīrkultūru veidā, kā arī bioaugmentācijas procesā simulētos reālos vide apstākļos. Izmantotās metodes ļauj salīdzinoši novērtēt mikroorganismu koncentrāciju un dinamiku vidē. Tika parādīts, ka mikroorganismu aktivitāte testa sistēmas apstākļos ir būtiski atšķirīga no in vitro. Konstatēts, ka bioaugmentācijas celmiem ir augsta izskalošanas pakāpe un ir nepieciešams veikt papildus pasākumus, lai to samazinātu. Ir grūti paredzēt pievienoto mikroorganismu efektu uz eksistējošo mikrofloru. Sēnei Gibberella indica ir augsts potenciāls tikt izmantotai fa…

farmācijas produktinotekūdeņu attīrīšanaqPCRbioaugmentācijaBioloģija
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