Search results for "RACE"

showing 10 items of 4458 documents

Promoter activity of the sea urchin (Paracentrotus lividus) nucleosomal H3 and H2A and linker H1 a-histone genes is modulated by enhancer and chromat…

2009

Core promoters and chromatin insulators are key regulatory elements that may direct a transcriptional enhancer to prefer a specific promoter in complex genetic loci. Enhancer and insulator flank the sea urchin (Paracentrotus lividus) alpha-histone H2A transcription unit in a tandem repeated cluster containing the five histone genes. This article deals with the specificity of interaction between the H2A enhancer-bound MBF-1 activator and histone gene promoters, and with the mechanism that leads the H1 transcripts to peak at about one-third of the value for nucleosomal H3 and H2A mRNAs. To this end, in vivo competition assays of enhancer and insulator functions were performed. Our evidence su…

Transcription GeneticEnhancer RNAsSettore BIO/11 - Biologia MolecolareGene Regulation Chromatin and EpigeneticsParacentrotus lividusHistonesGeneticsAnimalsNucleosomesea urchin enhancer chromatin insulator histone gene expression microinjectionTransgenesPromoter Regions GeneticEnhancerTranscription factorBinding SitesbiologyPromoterbiology.organism_classificationMolecular biologyChromatinNucleosomesChromatinEnhancer Elements GeneticHistoneembryonic structuresParacentrotusTrans-Activatorsbiology.proteinInsulator Elements
researchProduct

From attachment to damage: defined genes of Candida albicans mediate adhesion, invasion and damage during interaction with oral epithelial cells.

2010

Candida albicans frequently causes superficial infections by invading and damaging epithelial cells, but may also cause systemic infections by penetrating through epithelial barriers. C. albicans is an unusual pathogen because it can invade epithelial cells via two distinct mechanisms: induced endocytosis, analogous to facultative intracellular enteropathogenic bacteria, and active penetration, similar to plant pathogenic fungi. Here we investigated the molecular basis of C. albicans epithelial interactions. By systematically assessing the contributions of defined fungal pathways and factors to different stages of epithelial interactions, we provide an expansive portrait of the processes an…

Transcription GeneticGenes Fungallcsh:MedicineMycologyPathogenesisEndocytosisMicrobiologyMicrobiologyFungal ProteinsCandidiasis OralStress PhysiologicalCandida albicansCell AdhesionHumansCell adhesionCandida albicanslcsh:SciencePathogenBiologyMicrobial PathogensFungal proteinMouthMultidisciplinarybiologyIntracellular parasitelcsh:RFungiFungal DiseasesGlyoxylatesEpithelial Cellsbiology.organism_classificationIsocitrate LyaseCorpus albicansUp-RegulationHost-Pathogen InteractionInfectious DiseasesCaco-2Medicinelcsh:QCaco-2 CellsTranscriptomeSuperficial MycosesResearch ArticlePLoS ONE
researchProduct

Urokinase activates macrophage PON2 gene transcription via the PI3K/ROS/MEK/SREBP-2 signalling cascade mediated by the PDGFR-β

2009

Aims We have recently shown that urokinase plasminogen activator (uPA) increases oxidative stress (OS), cholesterol biosynthesis, and paraoxonase 2 (PON2) expression in macrophages via binding to its receptor, the uPAR. Since PON2 is regulated by both OS and cholesterol content, we hypothesized that uPA elicits a cascade of signal transduction events shared by NADPH oxidase and cholesterol biosynthesis that culminates in PON2 gene expression. Here, we investigated the signalling pathway that leads to the expression of PON2 in macrophages in response to uPA. Methods and results The increase in macrophage PON2 mRNA levels in response to uPA was shown to depend on PON2 gene promoter activation…

Transcription GeneticPhysiologyReceptor Platelet-Derived Growth Factor betaPhosphatidylinositol 3-KinasesPhysiology (medical)Gene expressionHumansExtracellular Signal-Regulated MAP KinasesTranscription factorCells CulturedMitogen-Activated Protein Kinase KinasesRegulation of gene expressionNADPH oxidasebiologyAryldialkylphosphataseKinaseMacrophagesNADPH OxidasesUrokinase-Type Plasminogen ActivatorCell biologySterol regulatory element-binding proteinUrokinase receptorGene Expression RegulationBiochemistryTissue Plasminogen Activatorbiology.proteinSignal transductionReactive Oxygen SpeciesCardiology and Cardiovascular MedicineSignal TransductionSterol Regulatory Element Binding Protein 2Cardiovascular Research
researchProduct

Cadmium effects on p38/MAPK isoforms in MDA-MB231 breast cancer cells

2009

Emerging evidence seems to indicate that the heavy metal cadmium (Cd) is able to regulate gene expression, drastically affecting the pattern of transcriptional activity in normal and pathological eukaryotic cells, also affecting intracellular signalization events. Human p38 is a family of mitogen-activated protein kinases consisting of four isoforms (alpha, beta, gamma and delta) which mediate signal transduction cascades controlling several aspects of cell physiology. In this study we examined whether exposure of MDA-MB231 tumor cells from the human breast to Cd may exert some effect on p38 isoform expression and accumulation, as well as on p38 activation. Employing a combination of prolif…

Transcriptional ActivationGene isoformCadmium SB203580 p38 isoforms p38 activation Gene expressionCell SurvivalPyridinesp38 mitogen-activated protein kinasesBreast NeoplasmsBiologyp38 Mitogen-Activated Protein KinasesGene Expression Regulation EnzymologicGeneral Biochemistry Genetics and Molecular BiologyBiomaterialsStructure-Activity RelationshipGene expressionTumor Cells CulturedHumansSettore BIO/06 - Anatomia Comparata E CitologiaCell ProliferationRegulation of gene expressionDose-Response Relationship DrugKinaseImidazolesMetals and AlloysMolecular biologyCell biologyIsoenzymesCell cultureDrug Screening Assays AntitumorSignal transductionGeneral Agricultural and Biological SciencesIntracellularCadmiumBioMetals
researchProduct

Sea urchin neural alpha 2 tubulin gene: isolation and promoter analysis

2004

Abstract Expression of Tα2 gene, during sea urchin Paracentrotus lividus development, is spatially and temporally regulated. In order to characterize this gene, we isolated the relevant genomic sequences and scanned the isolated 5 ′ -flanking region in searching for cis -regulatory elements required for proper expression. Gel mobility shift and footprinting assays, as well as reporter gene (CAT and β-gal) expression assays, were used to address cis -regulatory elements involved in regulation. Here we report that an upstream 5 ′ -flanking fragment of PlTα2 gene drives temporal expression of reporter genes congruent with that of endogenous Tα2 gene. The fragment contains cis -elements able to…

Transcriptional ActivationMolecular Sequence DataResponse elementBiophysicsPair-rule geneSettore BIO/11 - Biologia MolecolareBiochemistryParacentrotus lividusTubulinConsensus sequenceAnimalsCloning MolecularPromoter Regions GeneticMolecular BiologyGeneTranscription factorNeuronsGeneticsReporter geneBase SequencebiologyCell Biologybiology.organism_classificationGene ComponentsGenesSea UrchinsTubulin genes Neurogenesis Paracentrotus lividus Promoter Ectopic expressionEctopic expressionTranscription Initiation Site
researchProduct

Impairing Otp homeodomain function in oral ectoderm cells affects skeletogenesis in sea urchin embryos

2003

AbstractIn the sea urchin embryo skeletogenesis is the result of a complex series of molecular and cellular events that coordinate the morphogenetic process. Past and recent evidence strongly indicate that skeletal initiation and growth are strictly dependent on signals emanating from the oral ectodermal wall. As previously suggested, Orthopedia (Otp), a homeodomain-containing transcription factor specifically expressed in a small subset of oral ectoderm cells, might be implicated in this signalling pathway. In this study, we utilize three different strategies to address the issue of whether Otp is an upstream regulator of sketelogenesis. We describe the effects of microinjection of Otp mor…

Transcriptional Activationanimal structuresMorpholinoOrthopedia homeoboxMolecular Sequence DataEctodermNerve Tissue ProteinsBiologyFusion geneEctodermmedicineSkeletogenesisAnimalsAmino Acid SequenceSea urchin embryoTranscription factorMolecular BiologyMessenger RNAExtracellular Matrix ProteinsBone DevelopmentEmbryoCell BiologyMolecular biologyHedgehog signaling pathwayMorpholino oligonucleotidesCytoskeletal Proteinsmedicine.anatomical_structureProtein BiosynthesisSea Urchinsembryonic structuresHomeoboxDevelopmental BiologyDevelopmental Biology
researchProduct

Aberrant gene expression profiles in Mediterranean sea urchin reproductive tissues after metal exposures

2019

Abstract Marine organisms are simultaneously exposed to numerous pollutants, among which metals probably represent the most abundant in marine environments. In order to evaluate the effects of metal exposure at molecular level in reproductive tissues, we profiled the sea urchin transcriptional response after non-lethal exposures using pathway-focused mRNA expression analyses. Herein, we show that exposures to relatively high concentrations of both essential and toxic metals hugely affected the gonadic expression of several genes involved in stress-response, detoxification, transcriptional and post-transcriptional regulation, without significant changes in gonadosomatic indices. Even though …

Transcriptional profilingHealth Toxicology and Mutagenesis0208 environmental biotechnologySettore BIO/05 - Zoologia02 engineering and technology010501 environmental sciencesCo-exposures01 natural sciencesGene expressionSea urchinbiologyEchinodermMetalReproductionChemistry (all)General MedicineGonadPhenotypePollutionMetalsDefence mechanismParacentrotusEchinodermsSettore BIO/07 - EcologiaEnvironmental EngineeringOffspringSea UrchinZoologySettore BIO/11 - Biologia MolecolareDefence mechanismsbiology.animalDetoxificationMediterranean SeaAnimalsEnvironmental ChemistryEpigeneticsCo-exposureGonadsGeneGametogenesis0105 earth and related environmental sciencesAnimalStress responsePublic Health Environmental and Occupational HealthGeneral Chemistry020801 environmental engineeringSea UrchinsParacentrotuEnvironmental PollutionTranscriptome
researchProduct

Lipids of the Plant Plasma Membrane

2010

The plasma membrane (PM) is arguably the most diverse membrane of the plant cell. Furthermore, the protein and lipid composition of the PM varies with cell type, developmental stage, and environment. Physical properties of lipids and associate proteins allow the formation of a barrier that is selectively permeable to macromolecules and solutes. As the plasma membrane delineates the interface between the cell and the environment, it is the primary part of signal recognition and transduction into intracellular responses for nutritional uptake/distribution, environmental responses, and developmental signaling. Many essential PM functions are carried out by proteinaceous components. However, PM…

Transduction (genetics)medicine.anatomical_structureMembraneCellmedicineMembrane fluidityMembrane raftSemipermeable membraneBiologyLipid bilayerIntracellularCell biology
researchProduct

Differences in the cell walls and extracellular polymers of the two Trebouxia microalgae coexisting in the lichen Ramalina farinacea are consistent w…

2015

Trebouxia TR1 and T. TR9 are the two microalgae that coexist within Ramalina farinacea thalli. In the presence of Pb, TR9 formed extracellular aggregates, while TR1 showed a lower wall lead retention capability. Herein, we studied the cell walls and extracellular polymers (EPS) of TR1 and TR9, and their possible implication in the different Pb retention capacity of these microalgae. The proportion of cell walls on the overall cell biomass was 2.6 times higher in TR9 than in TR1. Glycosyl linkage analysis indicated the presence of hot-water soluble β-galactofuranan(s) in both cell walls, distinct from that previously described in Asterochloris, with increased rhamnose content in TR9 and a hi…

TrebouxiaLichensPolymersRhamnosePlant ScienceUronic acidBiologyRamalina farinaceaCell wallchemistry.chemical_compoundAscomycotaSpecies SpecificityCell WallChlorophytaBotanyMicroalgaeGeneticsExtracellularGlycosylSymbiosisGeneral Medicinebiology.organism_classificationThallusLeadchemistryBiophysicsEnvironmental PollutantsAgronomy and Crop SciencePlant Science
researchProduct

Wrażliwość izolatów Trichoderma viride ze strefy produkcji zakładu spożywczego na Divosan Forte

2016

Zanieczyszczenia mikrobiologiczne mogą stanowić zagrożenie podczas wytwarzania żywności, dlatego istotne jest stosowanie odpowiednich środków dezynfekcyjnych pozwalających zredukować możliwość kontaminacji produktu gotowego mikrobiotą towarzyszącą procesowi produkcji. Celem badań była ocena wpływu preparatu Divosan Forte (DF) na szczepy Trichoderma viride, wyizolowane ze strefy produkcyjnej jednego z zakładów produkcji spożywczej. Materiał badawczy stanowiły szczepy T. viride 21 i T. viride 56 wyizolowane metodą selekcyjną z powierzchni technologicznej zakładu produkującego żywność. Stosowany do dezynfekcji linii technologicznej Divosan Forte (DF) testowano w przeliczeniu na czysty kwas nad…

Trichoderma virideDivosan Fortefood industryperacetic acidprzemysł spożywczykwas nadoctowyProceedings of ECOpole
researchProduct