Search results for "RAMAN"

showing 10 items of 1328 documents

Conformational and structural studies of N-methylacetohydroxamic acid and of its mono- and bis-chelated uranium(VI) complexes

2015

The thermodynamics and kinetics of the cis/trans isomerism of N-methylacetohydroxamic acid (NMAH) and its conjugated base (NMA(-)) have been reinvestigated in aqueous media by (1)H NMR spectroscopy. Hindered rotation around the central C-N bond due to electronic delocalization becomes slow enough on the NMR time scale to observe both rotamers in equilibrium in D2O at room temperature. By properly assigning the methyl group resonances, evidence for the prevalence of the E over the Z form is unambiguously provided [K300=[E]/[Z]=2.86(2) and 9.63(5) for NMAH and NMA(-), respectively], closing thereby a long-lasting dispute about the most stable conformer. To that end, calculations of the chemic…

Models MolecularMolecular ConformationX-ray crystal structuresCrystallography X-RayHydroxamic AcidsSpectrum Analysis RamanBiochemistryInorganic Chemistrychemistry.chemical_compoundDelocalized electronReaction rate constantEXSY spectroscopyCoordination ComplexesSpectroscopyConformational isomerismChelating AgentsUranium(VI) complexesChemical shiftWater[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistryCrystallographyHydroxamic acidchemistry[ CHIM.THEO ] Chemical Sciences/Theoretical and/or physical chemistryRaman spectroscopyProton NMRQuantum TheoryUraniumDensity functional theoryMethyl group
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DFT studies on armchair (5, 5) SWCNT functionalization. Modification of selected structural and spectroscopic parameters upon two-atom molecule attac…

2015

Abstract Density functional theory (DFT) studies on adsorption of several gaseous homo- and hetero-diatomic molecules (AB) including H2, O2, N2, NO and CO on external surface of H-capped pristine armchair (5, 5) single-walled carbon nanotube (SWCNT) were conducted. Structures of C70H10 and the corresponding C70H10–AB adducts were fully optimized at the B3LYP/6-311G* level of theory. Calculated HOMO/LUMO energy gaps (Eg), 13C NMR chemical shifts and IR/Raman parameters were analyzed and critically compared with available experimental data. Significant changes of carbon NMR atom chemical shifts (up to −100 ppm) and shielding anisotropies (up to −180 ppm) at sites of addition were observed. Fu…

Models MolecularNanotubeMaterials scienceMagnetic Resonance SpectroscopyIR/RamanMolecular ConformationElectrons02 engineering and technologyCarbon nanotube010402 general chemistrySpectrum Analysis Raman01 natural scienceslaw.inventionsymbols.namesakeComputational chemistrylawSpectroscopy Fourier Transform InfraredMaterials ChemistryMoleculeDFT and GIAO NMRHOMO/LUMO gapPhysical and Theoretical ChemistryHOMO/LUMOSpectroscopyNanotubes CarbonChemical shiftsingle-walled karbon nanotube (SWCNT)Carbon-13 NMR021001 nanoscience & nanotechnologyComputer Graphics and Computer-Aided Design0104 chemical sciencessymbolsPhysical chemistryQuantum TheoryThermodynamicsDensity functional theory0210 nano-technologyRaman spectroscopyabsorptionJournal of Molecular Graphics and Modelling
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Pressure effects on the vibrational properties of alpha-Bi2O3: an experimental and theoretical study

2014

We report an experimental and theoretical high-pressure study of the vibrational properties of synthetic monoclinic bismuth oxide (alpha-Bi2O3), also known as mineral bismite. The comparison of Raman scattering measurements and theoretical lattice-dynamics ab initio calculations is key to understanding the complex vibrational properties of bismite. On one hand, calculations help in the symmetry assignment of phonons and to discover the phonon interactions taking place in this low-symmetry compound, which shows considerable phonon anticrossings; and, on the other hand, measurements help to validate the accuracy of first-principles calculations relating to this compound. We have also studied …

Models MolecularPhase transitionPhononHydrostatic pressureMolecular Conformationchemistry.chemical_elementMolecular physicsVibrationPhase TransitionBismuthCondensed Matter::Materials Sciencesymbols.namesakeAb initio quantum chemistry methodsMaterials TestingPressureTransition TemperatureGeneral Materials ScienceComputer SimulationHydrostatic pressureChemistryLattice dynamicsCondensed Matter PhysicsAmorphizationAmorphous solidCrystallographyModels ChemicalFISICA APLICADAsymbolsSesquioxidesAb initio calculationsBismuthRaman scatteringMonoclinic crystal system
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Tips and turns of bacteriophytochrome photoactivation

2020

Phytochromes are ubiquitous photosensor proteins, which control the growth, reproduction and movement in plants, fungi and bacteria. Phytochromes switch between two photophysical states depending on the light conditions. In analogy to molecular machines, light absorption induces a series of structural changes that are transduced from the bilin chromophore, through the protein, and to the output domains. Recent progress towards understanding this structural mechanism of signal transduction has been manifold. We describe this progress with a focus on bacteriophytochromes. We describe the mechanism along three structural tiers, which are the chromophore-binding pocket, the photosensory module,…

Models MolecularProtein Conformation116 Chemical sciencesHISTIDINE KINASESSIGNAL-TRANSDUCTIONfotobiologiabacteriophytochrome photoactivation010402 general chemistry01 natural sciencesbakteeritPhytochrome B03 medical and health sciencesProtein structureBacterial ProteinsINDUCED PROTON RELEASEPHYTOCHROME-BCRYSTAL-STRUCTUREPhysical and Theoretical Chemistry030304 developmental biologyINDUCED CONFORMATIONAL-CHANGESPhysics0303 health sciencesRESONANCE RAMANMechanism (biology)AGROBACTERIUM-TUMEFACIENSPhotochemical ProcessesMolecular machine0104 chemical sciencesINFRARED FLUORESCENT PROTEINSCHROMOPHORE-BINDING DOMAINBiophysics1182 Biochemistry cell and molecular biologyvalokemiaproteiinitPhytochromeSignal TransductionPhotochemical & Photobiological Sciences
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A quantum-chemical study of the structure, vibrations and SiH bond properties of disilylamine, NH(SiH3)2.

2002

Quantum-chemical calculations at HF, MP2 and B3LYP levels with 6-31G* and 6-311G** basis sets are reported for disilylamine, NH(SiH3)2. The equilibrium structure is found to vary with both level and basis set, all but one of the structures exhibiting a small lack of planarity of the HNSi2 system. The barrier to inversion, however, is found to be very low, at most 38 cm(-1). Vibration frequencies and intensities are calculated. The frequencies are scaled, where possible, either using updated infrared data or with the aid of factors transferred from N(CH3)(SiH3)2. Unobserved frequencies due to the v(s)NSi2, deltaNSi2 and delta(perpendicular)NH modes are predicted near 610, 210 and 360 cm(-1),…

Models MolecularSiliconSpectrophotometry InfraredChemistrySilicon CompoundsBiophysicsInfrared spectroscopyHydrogen atomHyperconjugationSpectrum Analysis RamanPotential energyAtomic and Molecular Physics and OpticsBiophysical PhenomenaAnalytical Chemistrysymbols.namesakesymbolsQuantum TheoryAtomic physicsInstrumentationMulliken population analysisSpectroscopyBasis setRaman scatteringNatural bond orbitalSpectrochimica acta. Part A, Molecular and biomolecular spectroscopy
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Vibrational spectrum of the spin crossover complex [Fe(phen)(2)(NCS)(2)] studied by IR and Raman spectroscopy, nuclear inelastic scattering and DFT c…

2006

The vibrational modes of the low-spin and high-spin isomers of the spin crossover complex [Fe(phen)(2)(NCS)(2)] (phen = 1,10-phenanthroline) have been measured by IR and Raman spectroscopy and by nuclear inelastic scattering. The vibrational frequencies and normal modes and the IR and Raman intensities have been calculated by density functional methods. The vibrational entropy difference between the two isomers, DeltaS(vib), which is--together with the electronic entropy difference DeltaS(el)--the driving force for the spin-transition, has been determined from the measured and from the calculated frequencies. The calculated difference (DeltaS(vib) = 57-70 J mol(-1) K(-1), depending on the m…

Models MolecularSpectrophotometry InfraredNitrogenAnalytical chemistryGeneral Physics and AstronomyInfrared spectroscopyInelastic scatteringIron Chelating AgentsSpectrum Analysis RamanMolecular physicsHot bandsymbols.namesakeIsomerismNormal modeSpin crossoverFerrous CompoundsPhysics::Chemical PhysicsPhysical and Theoretical ChemistryElectronic entropyChemistryMolecular vibrationsymbolsThermodynamicsSpin LabelsRaman spectroscopyMathematicsPhenanthrolinesPhysical chemistry chemical physics : PCCP
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Comparative Studies on IR, Raman, and Surface Enhanced Raman Scattering Spectroscopy of Dipeptides Containing ΔAla and ΔPhe

2012

Three dipeptides containing dehydroresidues (\DeltaAla, \Delta (Z)Phe, and \Delta (E)Phe) were examined by IR, Raman, and surface-enhanced Raman techniques for the first time. The effect of the size and isomer type of the β -substituent in the dehydroresidue on the conformational structure of the peptide was evaluated by using the analysis of IR and Raman bands. Additionally, SERS spectroscopy provided insight into the adsorption mechanism of these species on the metal surface. SERS spectra were recorded at alkaline pH on the silver sol using visible light excitation. The dehydroresidues studied here strongly influenced the SERS profile of the peptides. The most pronounced SERS signal for a…

Models MolecularSpectrophotometry InfraredSurface PropertiesPhenylalanineAnalytical chemistryMolecular ConformationSpectrum Analysis RamanVibrationMetalchemistry.chemical_compoundsymbols.namesakeAdsorptionDeprotonationSpectrophotometryMaterials ChemistrymedicineCarboxylatePhysical and Theoretical ChemistrySpectroscopyAlaninemedicine.diagnostic_testDipeptidesSurfaces Coatings and FilmsCrystallographychemistryMetalsvisual_artvisual_art.visual_art_mediumsymbolsRaman spectroscopyVisible spectrumJournal of Physical Chemistry B
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Characterization of Iron−Carbonyl-Protected Gold Clusters

2009

Ligand-stabilized nanometer-sized gold particles are interesting building blocks for molecular electronics, precursors for catalysts, optical labels for biomolecules and diagnosis, and potential nontoxic carriers for therapeutics. In this work we characterize for the first time, by means of near-infrared and Raman spectroscopy and time-dependent density functional calculations, gold clusters protected with iron-carbonyl ligands, such as {Au(22)[Fe(CO)(4)](12)}(6-) shown in the figure. Surprisingly, our results show that these novel compounds bear many analogues to another, well-studied, class of gold clusters, namely those of thiolate-monolayer-protected gold clusters. Our work adds a new d…

Models MolecularTime FactorsSpectrophotometry InfraredPhosphinesInfraredIronMolecular ConformationElectronsNanotechnologySpectrum Analysis RamanBiochemistryCatalysisCatalysissymbols.namesakeColloid and Surface ChemistryNano-chemistry.chemical_classificationAldehydesChemistryBiomoleculeMolecular electronicsGeneral ChemistryCombinatorial chemistryCharacterization (materials science)Gold particlesLinear ModelssymbolsQuantum TheoryGoldRaman spectroscopyJournal of the American Chemical Society
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Effects of elevated hydrogen peroxide 'strip' bleaching on surface and subsurface enamel including subsurface histomorphology, micro-chemical composi…

2007

Abstract Objectives This study examined the effects of elevated concentration hydrogen peroxide tooth whitening treatments on tooth surface and subsurface integrity. Methods Sound human molars were ground and polished to prepare an uniform substrate for bleaching treatments. A cycling treatment included alternating ex vivo human salivary exposures with bleaching treatments under conditions of controlled temperature and durations of treatment. Bleaching was carried out with prototype bleaching strips containing hydrogen peroxide gel at 13% and 16% concentrations. A non-bleached group was used as a control. Treatments included 28 h of total bleaching exposure in vitro . Surface color was meas…

MolarToothbrushingMaterials scienceTime Factorsgenetic structuresBleachDentistryColorSpectrum Analysis RamanPeroxideFluorescencechemistry.chemical_compoundstomatognathic systemHardnessMaterials TestingDentinmedicineTooth BleachingHumansHydrogen peroxideDental EnamelSalivaGeneral DentistryDentifricesTooth whiteningMicroscopy ConfocalEnamel paintbusiness.industryTemperatureTooth surfaceHydrogen PeroxideOxidantsstomatognathic diseasesmedicine.anatomical_structurechemistryvisual_artDentinvisual_art.visual_art_mediumMicroscopy Electron ScanningColorimetrysense organsbusinessNuclear chemistryJournal of dentistry
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Vibrational analysis of iron and zinc phosphate conversion coating constituents

2001

Abstract The FT-MIR/FT-FIR and NIR-FT-Raman spectra of orthorhombic α -Zn 3 (PO 4 ) 2 ·4H 2 O (α-hopeite) and monoclinic Zn 2 Fe(PO 4 ) 2 ·4H 2 O (phosphophyllite), including deuterated samples, have been measured in the polycrystalline state at room temperature and below. The distribution of vibrational levels was related to the results of complete unit-cell group analyses. The number of uncoupled OD stretching modes of α-hopeite (isotopically dilute samples) strongly exceeds that expected from the number of hydrogen positions of the structure reported. In contrast, unequivocal assignment of the four hydrogen bonds of phosphophyllite has been performed. The distortion of the phosphate tetr…

Molecular StructureHydrogenHydrogen bondAnalytical chemistryZinc phosphatechemistry.chemical_elementHydrogen BondingSpectrum Analysis RamanPhosphateAtomic and Molecular Physics and OpticsPhosphatesAnalytical Chemistrychemistry.chemical_compoundchemistryDeuteriumZinc CompoundsSpectroscopy Fourier Transform InfraredOrthorhombic crystal systemFerrous CompoundsCrystalliteCrystallizationInstrumentationSpectroscopyMonoclinic crystal systemSpectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy
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