Search results for "RAV"

showing 10 items of 5866 documents

An invasive species, Carassius gibelio, alters the native fish community through trophic niche competition

2019

Carbon and nitrogen stable isotope analyses were used to determine isotopic niche width of the invasive fish species Carassius gibelio to help assess the niche overlap and potential impact of this species on the native fish fauna in the Karamenderes River, northwest Turkey. C. gibelio had the highest niche area of the coexisting species. The greatest overlap of isotopic niche was between C. gibelio and Mugil cephalus in the river mouth. The freshwater species displayed similar patterns when taking into consideration their relative abundance and isotopic overlap. While C. gibelio is likely to outcompete some species at some localities, the species was found co-occurring with others by maximu…

0106 biological sciences010504 meteorology & atmospheric sciencesFaunamedia_common.quotation_subjectNichestable isotopesAquatic Science01 natural sciencesCompetition (biology)Invasive speciesfeeding ecologyAbundance (ecology)vieraslajitRelative species abundanceEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesWater Science and Technologymedia_commonfishEcologybiologyEcology010604 marine biology & hydrobiologykalat (eläimet)eliöyhteisötbiology.organism_classificationekologinen lokeroCarassiussärkikalatVacant nicheinvasiveravintoverkotAquatic Sciences
researchProduct

Trophic state changes can affect the importance of methane-derived carbon in aquatic food webs

2017

Methane-derived carbon, incorporated by methane-oxidizing bacteria, has been identified as a significant source of carbon in food webs of many lakes. By measuring the stable carbon isotopic composition (δ13C values) of particulate organic matter, Chironomidae andDaphniaspp. and their resting eggs (ephippia), we show that methane-derived carbon presently plays a relevant role in the food web of hypertrophic Lake De Waay, The Netherlands. Sediment geochemistry, diatom analyses and δ13C measurements of chironomid andDaphniaremains in the lake sediments indicate that oligotrophication and re-eutrophication of the lake during the twentieth century had a strong impact on in-lake oxygen availabili…

0106 biological sciences010504 meteorology & atmospheric scienceshiili580 Plants (Botany)01 natural sciencesDaphniaNutrientlakesEphippiaNetherlandsGeneral Environmental ScienceTrophic levelTotal organic carbonCarbon IsotopesEcologybiologyEcologyrehevöityminenmethaneGeneral MedicineCladoceraFood webeutrophicationinternationalGeneral Agricultural and Biological SciencesFood Chain530 Physicsta1172chemistry.chemical_elementjärvetmetaaniChironomidaestable carbon isotopesGeneral Biochemistry Genetics and Molecular BiologyAnimalssurviaissääsketisotopes0105 earth and related environmental sciencesisotoopitGeneral Immunology and Microbiologycarbon010604 marine biology & hydrobiologybiology.organism_classificationDaphniachemistryfood websvesikirputta1181Environmental scienceEutrophicationCarbonravintoverkotProceedings of the Royal Society B: Biological Sciences
researchProduct

Kestrels prefer scent marks according to species and reproductive status of voles

1999

We have previously documented that European kestrels (Falco tinnunculus L.) are attracted to the scent marks of small rodents in the presence of ultraviolet light (UV) but not visible light (VL). I...

0106 biological sciences010506 paleontologyEcologybiologyEcologyUltraviolet lightbiology.organism_classification010603 evolutionary biology01 natural sciencesFalco tinnunculusEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesÉcoscience
researchProduct

Recombinant laccase from Pediococcus acidilactici CECT 5930 with ability to degrade tyramine

2017

Biogenic amines degradation by bacterial laccases is little known, so we have cloned and heterologously expressed, in E. coli, a new laccase from Pediococcus acidilactici CECT 5930 (Lpa5930), a lactic acid bacterium commonly found in foods able to degrade tyramine. The recombinant enzyme has been characterized by physical and biochemical assays. Here we report the optimization of expression and purification procedures of this laccase. DNA encoding sequence of laccase from P. acidilactici was amplified by PCR and cloned into the expression plasmid pET28a for induction by isopropyl-β-D-thiogalactoipyranoside. Protein expression was performed in E. coli BL21(DE3) harboring pGro7 plasmid expres…

0106 biological sciences0301 basic medicineArabinoseMolecular biologylcsh:MedicineLaccasesBiochemistryBiotecnologia01 natural sciencesSubstrate Specificitylaw.inventionDatabase and Informatics Methodschemistry.chemical_compoundlawRecombinant Protein PurificationCloning MolecularAmineslcsh:Sciencechemistry.chemical_classificationMultidisciplinaryABTSbiologyOrganic CompoundsTemperatureHydrogen-Ion ConcentrationTyramineRecombinant ProteinsEnzymesChemistryRecombination-Based AssayBiochemistryPhysical SciencesRecombinant DNAElectrophoresis Polyacrylamide GelOxidation-ReductionSequence AnalysisResearch ArticleProtein PurificationBioinformaticsTyramineLibrary ScreeningDNA constructionResearch and Analysis Methods03 medical and health sciencesBacterial ProteinsSequence Motif Analysis010608 biotechnologyAmino Acid SequenceBenzothiazolesPediococcus acidilacticiLaccaseMolecular Biology Assays and Analysis TechniquesBase SequenceMolecular massLaccaseOrganic Chemistrylcsh:RChemical CompoundsBiology and Life SciencesProteinsPediococcus acidilacticiSequence Analysis DNAbiology.organism_classificationMolecular biology techniques030104 developmental biologyEnzymechemistryPlasmid ConstructionEnzymologySpectrophotometry Ultravioletlcsh:QSulfonic AcidsEnzimsProteïnesPurification TechniquesPLOS ONE
researchProduct

Ultraviolet radiation accelerates photodegradation under controlled conditions but slows the decomposition of senescent leaves from forest stands in …

2019

Depending on the environment, sunlight can positively or negatively affect litter decomposition, through the ensemble of direct and indirect processes constituting photodegradation. Which of these processes predominate depends on the ecosystem studied and on the spectral composition of sunlight received. To examine the relevance of photodegradation for litter decomposition in forest understoreys, we filtered ultraviolet radiation (UV) and blue light from leaves of Fagus sylvatica and Bettda pendula at two different stages of senescence in both a controlled-environment experiment and outdoors in four different forest stands (Picea abies, Pagus sylvatica, Acer platanoides, Betula pendula). Co…

0106 biological sciences0301 basic medicineCanopyUltraviolet RaysPhysiologyUV-B RADIATIONPlant ScienceForestsANTHOCYANINS01 natural sciencesUV radiationBOREAL FOREST03 medical and health scienceschemistry.chemical_compoundFagus sylvaticaPhotodegradationGeneticsPhotodegradationEcosystemFinlandComputingMilieux_MISCELLANEOUS11832 Microbiology and virologyFlavonoidsSunlight[SDV.EE]Life Sciences [q-bio]/Ecology environment4112 ForestryPhotolysisbiologyChemistryTEMPERATEPLANT LITTERPicea abies15. Life on landPlant litterbiology.organism_classificationPhenolic compoundsUnderstorey light environmentSODANKYLAPlant LeavesHorticultureLIGHT030104 developmental biology13. Climate actionBetula pendulaChlorophyllPATTERNS1182 Biochemistry cell and molecular biologyLEAF-LITTER DECOMPOSITION010606 plant biology & botany
researchProduct

New insight to the role of microbes in the methane exchange in trees: evidence from metagenomic sequencing

2021

Methane (CH4) exchange in tree stems and canopies and the processes involved are among the least understood components of the global CH4 cycle. Recent studies have focused on quantifying tree stems as sources of CH4 and understanding abiotic CH4 emissions in plant canopies, with the role of microbial in situ CH4 formation receiving less attention. Moreover, despite initial reports revealing CH4 consumption, studies have not adequately evaluated the potential of microbial CH4 oxidation within trees. In this paper, we discuss the current level of understanding on these processes. Further, we demonstrate the potential of novel metagenomic tools in revealing the involvement of microbes in the C…

0106 biological sciences0301 basic medicinePhysiologyPlant Science01 natural sciencesmetaaniMethaneTreesbakteerit03 medical and health scienceschemistry.chemical_compoundboreal forestsUltraviolet radiationAbiotic componentbiologyNorwayEcologyAtmospheric methaneTaigakasvifysiologiapuut (kasvit)Picea abiesgenomiikka15. Life on landbiology.organism_classificationmethanogenic archaeametsätplant microbiometree030104 developmental biologymethane exchangeboreaalinen vyöhykemikrobistochemistry13. Climate actionMetagenomicsEnvironmental scienceaineiden kiertoMetagenomicsmethanotrophic bacteriaMethanearkeonit010606 plant biology & botanycaptured metagenomicsNew Phytologist
researchProduct

Genome analysis of the monoclonal marbled crayfish reveals genetic separation over a short evolutionary timescale

2021

The marbled crayfish (Procambarus virginalis) represents a very recently evolved parthenogenetic freshwater crayfish species that has invaded diverse habitats in Europe and in Madagascar. However, population genetic analyses have been hindered by the homogeneous genetic structure of the population and the lack of suitable tools for data analysis. We have used whole-genome sequencing to characterize reference specimens from various known wild populations. In parallel, we established a whole-genome sequencing data analysis pipeline for the population genetic analysis of nearly monoclonal genomes. Our results provide evidence for systematic genetic differences between geographically separated …

0106 biological sciences0301 basic medicinePopulation geneticsQH301-705.5ParthenogenesisPopulationMedicine (miscellaneous)Population geneticsAstacoideaBiology010603 evolutionary biology01 natural sciencesGenomeArticleEvolutionary geneticsGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesAnimalsvieraslajitBiology (General)Population GrowthEvolutionary dynamicseducationgenome analysiseducation.field_of_studyGenomeInvasive speciescrayfishHuman evolutionary geneticspartenogeneesiPopulation sizemusculoskeletal neural and ocular physiologygenomiikkaCrayfishBiological EvolutionEuropePhylogeography030104 developmental biologynervous systemEvolutionary biologyGenetic structurearticleslajiutuminenProcambarus virginalisGeneral Agricultural and Biological SciencesravutCommunications Biology
researchProduct

Variable crab camouflage patterns defeat search image formation.

2021

Understanding what maintains the broad spectrum of variation in animal phenotypes and how this influences survival is a key question in biology. Frequency dependent selection – where predators temporarily focus on one morph at the expense of others by forming a “search image” – can help explain this phenomenon. However, past work has never tested real prey colour patterns, and rarely considered the role of different types of camouflage. Using a novel citizen science computer experiment that presented crab “prey” to humans against natural backgrounds in specific sequences, we were able to test a range of key hypotheses concerning the interactions between predator learning, camouflage and mor…

0106 biological sciences0301 basic medicineTime FactorsComputer scienceQH301-705.5BrachyuraBehavioural ecologyFrequency-dependent selectionMedicine (miscellaneous)ColorVariation (game tree)010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyArticlePredationtaskuravut03 medical and health sciencesDisruptive colorationCitizen scienceAnimalsHumansexperimental evolutionBiology (General)muuntelu (biologia)PredatorEcosystemsuojaväriMechanism (biology)Pigmentationbehavioural ecologyAdaptation Physiological030104 developmental biologyPhenotypeVideo GamesExperimental evolutionEvolutionary biologyCamouflagePattern Recognition PhysiologicalPredatory BehaviorfenotyyppiGeneral Agricultural and Biological SciencesColor PerceptionCommunications biology
researchProduct

UV-screening and springtime recovery of photosynthetic capacity in leaves of Vaccinium vitis-idaea above and below the snow pack

2019

International audience; Evergreen plants in boreal biomes undergo seasonal hardening and dehardening adjusting their photosynthetic capacity and photoprotection; acclimating to seasonal changes in temperature and irradiance. Leaf epidermal ultraviolet (UV)-screening by flavonols responds to solar radiation, perceived in part through increased ultraviolet-B (UV-B) radiation, and is a candidate trait to provide cross-photoprotection. At Hyytiälä Forestry Station, central Finland, we examined whether the accumulation of flavonols was higher in leaves of Vaccinium vitis-idaea L. growing above the snowpack compared with those below the snowpack. We found that leaves exposed to colder temperature…

0106 biological sciences0301 basic medicineTime FactorsPhotoinhibitionBOREALPhysiologyPlant ScienceForests01 natural sciencesPlant EpidermisAnthocyaninsSoilFlavonolsLOW-TEMPERATURESnowPhotosynthesis1183 Plant biology microbiology virologychemistry.chemical_classificationspring dehardening.CLIMATE-CHANGEbiologyChemistryTemperatureUnderstoreyHorticultureLIGHTSeasonsVacciniumUltraviolet RaysGrowing seasonPhotosynthesisDWARF SHRUB03 medical and health sciencesLEAFPHOTOSYSTEM-IIGenetics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyVaccinium vitis-idaeaFlavonoidsSpring dehardeningPhotoprotectionSpectral qualityPhotosystem II Protein ComplexPigments Biological15. Life on landEvergreenbiology.organism_classificationPhotosynthetic capacitySUB-ARCTIC HEATHPlant Leaves030104 developmental biology13. Climate actionPhotoprotectionWINTERB RADIATIONArctic browning010606 plant biology & botany
researchProduct

Environmentally‐induced noise dampens and reddens with increasing trophic level in a complex food web

2019

Stochastic variability of key abiotic factors including temperature, precipitation and the availability of light and nutrients greatly influences species’ ecological function and evolutionary fate. Despite such influence, ecologists have typically ignored the effect of abiotic stochasticity on the structure and dynamics of ecological networks. Here we help to fill that gap by advancing the theory of how abiotic stochasticity, in the form of environmental noise, affects the population dynamics of species within food webs. We do this by analysing an allometric trophic network model of Lake Constance subjected to positive (red), negative (blue), and non‐autocorrelated (white) abiotic temporal …

0106 biological sciences0301 basic medicinecoloured noiseAcousticsta1172Biology010603 evolutionary biology01 natural sciencesekosysteemithäiriöt03 medical and health sciencesEcology Evolution Behavior and Systematicsstokastiset prosessitTrophic levelvesiekosysteemitColoured noise15. Life on landFood webekosysteemit (ekologia)ecosystem dynamicsNoise030104 developmental biologyEcosystem dynamicsta1181matemaattiset mallitenvironmental stochasticityravintoverkotympäristönmuutoksetOikos
researchProduct