Search results for "REDUCTION"

showing 10 items of 2058 documents

Hydroxylamine released by nitrifying microorganisms is a precursor for HONO emission from drying soils

2018

AbstractNitrous acid (HONO) is an important precursor of the hydroxyl radical (OH), the atmosphere´s primary oxidant. An unknown strong daytime source of HONO is required to explain measurements in ambient air. Emissions from soils are one of the potential sources. Ammonia-oxidizing bacteria (AOB) have been identified as possible producers of these HONO soil emissions. However, the mechanisms for production and release of HONO in soils are not fully understood. In this study, we used a dynamic soil-chamber system to provide direct evidence that gaseous emissions from nitrifying pure cultures contain hydroxylamine (NH2OH), which is subsequently converted to HONO in a heterogeneous reaction w…

010504 meteorology & atmospheric sciencesMicroorganismScienceHeterotrophNitrous AcidHydroxylamine010501 environmental sciences01 natural sciencesArticlechemistry.chemical_compoundSoilHydroxylamineAmmoniaSoil Microbiology0105 earth and related environmental sciencesNitrous acidMultidisciplinarybiologyBacteriaAtmosphereHydroxyl RadicalQRbiology.organism_classificationArchaeaNitrificationchemistryNitrifying bacteriaEnvironmental chemistryMedicineHydroxyl radicalNitrificationGasesSoil microbiologyOxidation-ReductionScientific Reports
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Recombinant laccase from Pediococcus acidilactici CECT 5930 with ability to degrade tyramine

2017

Biogenic amines degradation by bacterial laccases is little known, so we have cloned and heterologously expressed, in E. coli, a new laccase from Pediococcus acidilactici CECT 5930 (Lpa5930), a lactic acid bacterium commonly found in foods able to degrade tyramine. The recombinant enzyme has been characterized by physical and biochemical assays. Here we report the optimization of expression and purification procedures of this laccase. DNA encoding sequence of laccase from P. acidilactici was amplified by PCR and cloned into the expression plasmid pET28a for induction by isopropyl-β-D-thiogalactoipyranoside. Protein expression was performed in E. coli BL21(DE3) harboring pGro7 plasmid expres…

0106 biological sciences0301 basic medicineArabinoseMolecular biologylcsh:MedicineLaccasesBiochemistryBiotecnologia01 natural sciencesSubstrate Specificitylaw.inventionDatabase and Informatics Methodschemistry.chemical_compoundlawRecombinant Protein PurificationCloning MolecularAmineslcsh:Sciencechemistry.chemical_classificationMultidisciplinaryABTSbiologyOrganic CompoundsTemperatureHydrogen-Ion ConcentrationTyramineRecombinant ProteinsEnzymesChemistryRecombination-Based AssayBiochemistryPhysical SciencesRecombinant DNAElectrophoresis Polyacrylamide GelOxidation-ReductionSequence AnalysisResearch ArticleProtein PurificationBioinformaticsTyramineLibrary ScreeningDNA constructionResearch and Analysis Methods03 medical and health sciencesBacterial ProteinsSequence Motif Analysis010608 biotechnologyAmino Acid SequenceBenzothiazolesPediococcus acidilacticiLaccaseMolecular Biology Assays and Analysis TechniquesBase SequenceMolecular massLaccaseOrganic Chemistrylcsh:RChemical CompoundsBiology and Life SciencesProteinsPediococcus acidilacticiSequence Analysis DNAbiology.organism_classificationMolecular biology techniques030104 developmental biologyEnzymechemistryPlasmid ConstructionEnzymologySpectrophotometry Ultravioletlcsh:QSulfonic AcidsEnzimsProteïnesPurification TechniquesPLOS ONE
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’Structural constraints in cyanobacteria-mediated whole-cell biotransformation of methoxylated and methylated derivatives of 2′-hydroxychalcone

2019

Halophilic and freshwater strains of cyanobacteria representing the Oscillatoriales, Nostocales, Chroococcales, and Synechococcales orders of Cyanophyta were examined to determine (i) the resistance of their cultures when suppressed by the presence of exogenous methoxylated and methylated derivatives of 2'-hydroxychalcone, (ii) morphological changes in cells treated with the tested chalcones and, most importantly, (iii) whether these photoautotrophic microorganisms transform chalcone derivatives in a structure- or strain-dependent manner. The growth of cyanobacterial cultures depended on chalcone derivatives and the strain; nevertheless, trends for correlations between these parameters are …

0106 biological sciences0301 basic medicineCyanobacteriaChalconeStereochemistrySubstituentBioengineeringCyanobacteriaHydroxylation01 natural sciencesApplied Microbiology and BiotechnologyMethylationHydroxylation03 medical and health scienceschemistry.chemical_compoundChalconesBiotransformation010608 biotechnologyBiotransformationNostocalesSynechococcalesHydrogenative bioreductionbiologyEthoxylationGeneral Medicinebiology.organism_classification030104 developmental biologychemistryOscillatorialesWhole-cell biotransformationBiotechnologyJournal of Biotechnology
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Insect repellent and chemical agronomic treatments to reduce seed numberin'Afourer'mandarin. Effect on yield and fruit diameter

2019

Abstract Obtaining citrus fruits without seeds is a recurrent objective for farmers as it is one of the most valued characteristics, especially in mandarins. ‘Afourer’ tangor is a highly valuable well-established mandarin, and a high percentage of seeded fruits are produced under cross-pollination conditions. Several agronomic techniques have been suggested to control presence of seeds, such as covering with nets and copper sulfate (CuSO4) and gibberellic acid (GA3) treatments. Natural bee repellents are also proposed to reduce the number of seeds per fruit. In this study, we aimed to compare the effect of several agronomic treatments to reduce the seed number in 'Afourer' mandarin. To this…

0106 biological sciences0301 basic medicineInsecticidesAfourerBOTANICACitrus fruitsAgricultura ExperimentacióHorticulture01 natural sciencesMandarin Chinese03 medical and health scienceschemistry.chemical_compoundYield (wine)Copper sulfateGibberellic acidGibberellic acidTangorbiologySeed numberWeak relationshipInsect repellentfood and beveragesCopper sulfatebiology.organism_classificationlanguage.human_languageHorticultureCapsicum annuumFruita030104 developmental biologychemistrylanguageSeed reductionNet-covered treesInsect repellentFruit diameter010606 plant biology & botany
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Exposure to environmental radionuclides is associated with altered metabolic and immunity pathways in a wild rodent

2019

Wildlife inhabiting environments contaminated by radionuclides face putative detrimental effects of exposure to ionizing radiation, with biomarkers such as an increase in DNA damage and/or oxidative stress commonly associated with radiation exposure. To examine the effects of exposure to radiation on gene expression in wildlife, we conducted a de novo RNA sequencing study of liver and spleen tissues from a rodent, the bank vole Myodes glareolus. Bank voles were collected from the Chernobyl Exclusion Zone (CEZ), where animals were exposed to elevated levels of radionuclides, and from uncontaminated areas near Kyiv, Ukraine. Counter to expectations, we did not observe a strong DNA damage resp…

0106 biological sciences0301 basic medicineRodentDNA Repairmedicine.disease_cause01 natural sciencessäteilybiologiachemistry.chemical_compoundRadiation IonizingMyodes glareolusstable isotopepollutionaineenvaihduntaBeta oxidationradionuclides2. Zero hungerbiologyArvicolinaeFatty AcidsRadiation ExposureRNAseqBank voleMolecular AdaptationLiverimmuunijärjestelmäOriginal ArticleUkraineOxidation-ReductionmetsämyyräDNA damageDNA repair010603 evolutionary biologyMicrobiology03 medical and health sciencesImmunitybiology.animalGeneticsmedicineAnimalsEcology Evolution Behavior and SystematicsRadioisotopesFatty acid metabolismLipid metabolismDNAbiology.organism_classificationLipid MetabolismOxidative Stress030104 developmental biologychemistryChernobyl Nuclear Accident13. Climate actionImmune SystemRNAORIGINAL ARTICLESOxidative stressSpleenDNA DamageMutagens
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Thioredoxin (Trxo1) interacts with proliferating cell nuclear antigen (PCNA) and its overexpression affects the growth of tobacco cell culture.

2017

Thioredoxins (Trxs), key components of cellular redox regulation, act by controlling the redox status of many target proteins, and have been shown to play an essential role in cell survival and growth. The presence of a Trx system in the nucleus has received little attention in plants, and the nuclear targets of plant Trxs have not been conclusively identified. Thus, very little is known about the function of Trxs in this cellular compartment. Previously, we studied the intracellular localization of PsTrxo1 and confirmed its presence in mitochondria and, interestingly, in the nucleus under standard growth conditions. In investigating the nuclear function of PsTrxo1 we identified proliferati…

0106 biological sciences0301 basic medicineTFs transcription factorsOverexpressionBiologíaBiFC bimolecular fluorescence complementationClinical BiochemistryCell Culture TechniquesTobacco BY-2 cells01 natural sciencesBiochemistryTBY-2 tobacco bright yellow-2DTT 14-dithiothreitolBimolecular fluorescence complementationThioredoxinsGene Expression Regulation PlantTrx thioredoxinlcsh:QH301-705.5GFP green fluorescent proteinlcsh:R5-920biologyProliferating cell nuclear antigen (PCNA)Cell cycleGlutathione3. Good healthCell biologyMitochondriaNTR NADPH thioredoxin reductaseProtein TransportDEM diethyl maleateRT-qPCR Reverse transcription quantitative polymerase chain reactionThioredoxinlcsh:Medicine (General)Oxidation-ReductionAMS 4-acetamido-4-maleimidylstilbene-22-disulfonic acidResearch PaperPCNA proliferating cell nuclear antigenOex overexpressingCell cycleNucleusThioredoxin o103 medical and health sciencesROS reactive oxygen speciesDownregulation and upregulationProliferating Cell Nuclear AntigenTobaccoDAPI 46-diamidine-2-phenylindolmCBM monochlorobimaneCellular compartmentCell NucleusCell growthOrganic ChemistryBotánicaPeasMolecular biologyYFP yellow fluorescent proteinProliferating cell nuclear antigenTBS Tris-buffered salineOD optical density030104 developmental biologylcsh:Biology (General)Cell cultureRNA reactive nitrogen speciesbiology.proteinPrx peroxiredoxinBSA bovine serum albumin010606 plant biology & botanyRedox biology
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Deficiency in the Phosphorylated Pathway of Serine Biosynthesis Perturbs Sulfur Assimilation.

2018

Although the plant Phosphorylated Pathway of l-Ser Biosynthesis (PPSB) is essential for embryo and pollen development, and for root growth, its metabolic implications have not been fully investigated. A transcriptomics analysis of Arabidopsis (Arabidopsis thaliana) PPSB-deficient mutants at night, when PPSB activity is thought to be more important, suggested interaction with the sulfate assimilation process. Because sulfate assimilation occurs mainly in the light, we also investigated it in PPSB-deficient lines in the day. Key genes in the sulfate starvation response, such as the adenosine 5′phosphosulfate reductase genes, along with sulfate transporters, especially those involved in sulfat…

0106 biological sciences570PhysiologyArabidopsisPlant Science01 natural sciencesSerinechemistry.chemical_compoundSulfur assimilationBiosynthesisArabidopsisGeneticsSerineSulfate assimilationPhosphorylationbiologyWild typeAssimilation (biology)GlutathioneArticlesbiology.organism_classificationchemistryBiochemistryTranscriptomeOxidation-ReductionSulfur010606 plant biology & botanySignal TransductionPlant physiology
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Seasonal cycle of benthic denitrification and DNRA in the aphotic coastal zone, northern Baltic Sea

2020

Current knowledge on the seasonality of benthic nitrate reduction pathways in the aphotic, density stratified coastal zone of the Baltic Sea is largely based on data from muddy sediments, neglecting the potential contribution of sandy sediments. To gain a more comprehensive understanding of seasonality in this part of the Baltic Sea coast, we measured rates of benthic denitrification, anammox and dissimilatory nitrate reduction to ammonium (DNRA) monthly in the ice-free period of 2016 in both sandy and muddy aphotic sediments, northwestern Gulf of Finland. No anammox was observed. The seasonal cycle of denitrification in both sediment types was related to the hydrography-driven development …

0106 biological sciencesDenitrification010504 meteorology & atmospheric sciencesMARINE-SEDIMENTSFIXED-NITROGENsedimentitANAMMOX01 natural scienceswater column density stratificationCoastal zoneorganic matterNUTRIENT FLUXESEcologykausivaihtelutnitraatitWater column density stratificationOceanographyBenthic zoneOrganic matterorgaaninen ainesSeasonal cycledenitrifikaatioSandy sedimentrannikkoalueetDISSIMILATORY NITRATE REDUCTIONNutrient fluxAquatic ScienceNITRIFICATIONNitrate reduction14. Life underwaterCoastal filter1172 Environmental sciencesEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesbenthic−pelagic coupling010604 marine biology & hydrobiologyGeomorphologyISOTOPE PAIRING TECHNIQUENorthern Gulf of FinlandBenthic-pelagic couplingAMMONIUMgeomorphologysandy sedimentESTUARINE SEDIMENTNITROGEN REMOVALnitrate reductionBaltic sea13. Climate actionAphotic zonecoastal filteraineiden kiertoEnvironmental scienceNitrificationMarine Ecology Progress Series
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Enforced monoandry over generations induces a reduction of female investment into reproduction in a promiscuous bird.

2021

Abstract While uncovering the costs and benefits of polyandry has attracted considerable attention, assessing the net effect of sexual selection on population fitness requires the experimental manipulation of female mating over generations, which is usually only achievable in laboratory populations of arthropods. However, knowing if sexual selection improves or impairs the expression of life‐history traits is key for the management of captive populations of endangered species, which are mostly long‐lived birds and mammals. It might therefore be questionable to extrapolate the results gathered on laboratory populations of insects to infer the net effect of sexual selection on populations of …

0106 biological sciencesEvolutionNatural resource economicsfemale multiple matingpolyandryReproduction (economics)[SDV]Life Sciences [q-bio]Biology010603 evolutionary biology01 natural sciencesReduction (complexity)03 medical and health sciencesQH359-425Geneticsreproductive investmentEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencespostcopulatory sexual selectionex situ conservationOriginal Articles15. Life on landEx situ conservationInvestment (macroeconomics)Original ArticleGeneral Agricultural and Biological SciencesEvolutionary applications
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Genome Economization in the Endosymbiont of the Wood Roach Cryptocercus punctulatus Due to Drastic Loss of Amino Acid Synthesis Capabilities

2011

Cockroaches (Blattaria: Dictyoptera) harbor the endosymbiont Blattabacterium sp. in their abdominal fat body. This endosymbiont is involved in nitrogen recycling and amino acid provision to its host. In this study, the genome of Blattabacterium sp. of Cryptocercus punctulatus (BCpu) was sequenced and compared with those of the symbionts of Blattella germanica and Periplaneta americana, BBge and BPam, respectively. The BCpu genome consists of a chromosome of 605.7 kb and a plasmid of 3.8 kb and is therefore approximately 31 kb smaller than the other two aforementioned genomes. The size reduction is due to the loss of 55 genes, 23 of which belong to biosynthetic pathways for amino acids. The …

0106 biological sciencesMaleMolecular Sequence DataCockroachesBiology010603 evolutionary biology01 natural sciences03 medical and health scienceschemistry.chemical_compoundBlattabacteriumGenome SizeValineGeneticsEndophytesAnimalsAmino Acidsgenome reductionGenome sizeEcology Evolution Behavior and SystematicsAmino acid synthesisResearch Articles030304 developmental biology2. Zero hungerchemistry.chemical_classificationGenetics0303 health sciencesBlattabacteriumMethionineBacteroideteswood-feedingbiology.organism_classificationsymbiosisAmino acidchemistryBiochemistrymetabolic pathway lossFemaleIsoleucineLeucineGenome BacterialGenome Biology and Evolution
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