Search results for "REGIONS"

showing 10 items of 1521 documents

TGF-beta1 in liver fibrosis: an inducible transgenic mouse model to study liver fibrogenesis.

1999

Transforming growth factor-beta1 (TGF-beta1) is a powerful stimulus for collagen formation in vitro. To determine the in vivo effects of TGF-beta1 on liver fibrogenesis, we generated transgenic mice overexpressing a fusion gene [C-reactive protein (CRP)/TGF-beta1] consisting of the cDNA coding for an activated form of TGF-beta1 under the control of the regulatory elements of the inducible human CRP gene promoter. Two transgenic lines were generated with liver-specific overexpression of mature TGF-beta1. After induction of the acute phase response (15 h) with lipopolysaccharide (100 microgram ip), plasma TGF-beta1 levels reached600 ng/ml in transgenic animals, which is100 times above normal …

Genetically modified mouseLipopolysaccharidesmedicine.medical_specialtyTranscription GeneticPhysiologyTransgeneRecombinant Fusion ProteinsMice TransgenicBiologyRegulatory Sequences Nucleic AcidLiver Cirrhosis ExperimentalMiceDownregulation and upregulationFibrosisIn vivoTransforming Growth Factor betaPhysiology (medical)Internal medicinemedicineAnimalsHumansRNA MessengerPromoter Regions GeneticRegulation of gene expressionHepatologyGastroenterologymedicine.diseaseMolecular biologyImmunohistochemistryEndocrinologymedicine.anatomical_structureC-Reactive ProteinGene Expression RegulationLiverHepatocyteHepatic stellate cellCollagenProcollagen
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A novel in vivo inducible dendritic cell ablation model in mice

2010

Abstract Dendritic cells (DCs) are involved in T cell activation via their uptake and presentation of antigens. In vivo function of DCs was analyzed using transgenic mouse models that express diphtheria toxin receptor (DTR) or the diphtheria toxin-A subunit (DTA) under the control of the CD11c/Itgax promoter. However, CD11c+ cells are heterogeneous populations that contain several DC subsets. Thus, the in vivo function of each subset of DCs remains to be elucidated. Here, we describe a new inducible DC ablation model, in which DTR expression is induced under the CD11c/Itgax promoter after Cre-mediated excision of a stop cassette (CD11c-iDTR). Crossing of CD11c-iDTR mice with CAG-Cre transge…

Genetically modified mouseT cellBiophysicsCD11cCre recombinaseMice Transgenicchemical and pharmacologic phenomenaBiologyBiochemistryMiceAntigenIn vivomedicineAnimalsPromoter Regions GeneticMolecular BiologyIntegraseshemic and immune systemsDendritic CellsCell BiologyDendritic cellMolecular biologyIn vitroCD11c Antigenmedicine.anatomical_structureModels AnimalIntercellular Signaling Peptides and ProteinsHeparin-binding EGF-like Growth FactorBiochemical and Biophysical Research Communications
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Internal limiting membrane peeling versus no peeling during primary vitrectomy for rhegmatogenous retinal detachment: A systematic review and meta-an…

2018

Background Internal limiting membrane (ILM) peeling during primary vitrectomy for rhegmatogenous retinal detachment (RRD) prevents the formation of postoperative macular epiretinal membrane (ERM). However, studies that compared vitrectomy with and without ILM peeling for RRD, have reported controversial outcomes. Objective To assess the efficacy of ILM peeling versus non-ILM peeling during vitrectomy for RRD by a systematic review and meta-analysis of published studies. Methods PubMed, Medline, Web of Science, Embase databases, and the Cochrane Library were searched up to April 2018 to identify studies that compared primary vitrectomy with and without ILM peeling for RRD with at least six m…

Genetics and Molecular Biology (all)Visual acuitygenetic structuresVisionmedicine.medical_treatmentVisual Acuitylcsh:MedicineSocial SciencesVitrectomyBiochemistrylaw.inventionDatabase and Informatics Methods0302 clinical medicineMathematical and Statistical TechniquesPostoperative ComplicationsRandomized controlled trialBiochemistry Genetics and Molecular Biology (all); Agricultural and Biological Sciences (all)lawVitrectomyMedicine and Health SciencesPsychology030212 general & internal medicineDatabase Searchinglcsh:ScienceMultidisciplinaryOphthalmic ProceduresRetinal detachmentEpiretinal MembraneResearch AssessmentMeta-analysisPhysical SciencesRetinal DisordersSensory PerceptionEpiretinal membranemedicine.symptomAnatomyStatistics (Mathematics)HumanResearch Articlemedicine.medical_specialtySystematic ReviewsSurgical and Invasive Medical ProceduresResearch and Analysis Methods03 medical and health sciencesOcular SystemOphthalmologymedicineHumansStatistical MethodsBiochemistry Genetics and Molecular Biology (all)Primary vitrectomybusiness.industryInternal limiting membranelcsh:RRetinal DetachmentBiochemistry; Genetics and Molecular Biology (all); Agricultural and Biological Sciences (all)Biology and Life Sciencesmedicine.diseaseeye diseasesbody regionsOphthalmologyAgricultural and Biological Sciences (all)030221 ophthalmology & optometryEyeslcsh:QPostoperative Complicationsense organsbusinessHeadMathematicsMeta-AnalysisNeuroscience
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The CpG island methylator phenotype in breast cancer is associated with the lobular subtype

2014

Background: Aberrations in DNA methylation patterns are well-described in human malignancies. However, the existence of the ‘CpG island methylator phenotype’ (CIMP) in human breast cancer is still controversial. Materials & methods: Illumina's HumanMethylation 450K BeadChip was used to analyze genome-wide DNA methylation patterns. Chromosomal abnormalities were determined by array-based CGH. Results: Invasive lobular breast carcinomas exhibit the highest number of differentially methylated CpG sites and a strong inverse correlation of aberrant DNA hypermethylation and copy number alterations. Nine differentially methylated regions within seven genes discriminating the investigated subg…

GeneticsCancer ResearchCpG Island Methylator PhenotypeGene ExpressionCancerBreast NeoplasmsDNA MethylationBiologymedicine.diseaseEpigenesis GeneticPhenotypeDifferentially methylated regionsBreast cancerCpG siteTumor progressionCell Line TumorDNA methylationGeneticsCancer researchmedicineHumansCpG IslandsFemaleEpigeneticsEpigenomics
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Structural and functional characterization of a transcription-enhancing sequence element in the rbcL gene of the Chlamydomonas chloroplast genome.

2002

The structure and function of a transcription-enhancing sequence element in the coding region of the Chlamydomonas reinhardtii rbcL gene was analyzed in Chlamydomonas chloroplast transformants in vivo. The enhancer sequence is contained within a DNA segment extending from position +108 to position +143, relative to the start site of rbcL gene transcription. The sequence remains functional when inverted or when placed 34 bp closer to or 87 bp further downstream of the basic rbcL promoter. However, it does not function from a site about 250 bp downstream of its original location. Besides promoting transcription initiation from the rbcL promoter, the element is able to augment transcription fr…

GeneticsChloroplastsbiologyRibulose-Bisphosphate CarboxylaseChlamydomonasResponse elementChlamydomonasPromoterGeneral Medicinebiology.organism_classificationGenomeEnhancer Elements GeneticTranscription (biology)GeneticsCoding regionAnimalsEnhancerPromoter Regions GeneticGenePlant ProteinsCurrent genetics
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Copper homeostasis influences the circadian clock in Arabidopsis.

2010

Almost every aspect of plant physiology is influenced by diurnal and seasonal environmental cycles which suggests that biochemical oscillations must be a pervasive phenomenon in the underlying molecular organization. The circadian clock is entrained by light and temperature cycles, and controls a wide variety of endogenous processes that enable plants to anticipate the daily periodicity of environmental conditions. Several previous reports suggest a connection between copper (Cu) homeostasis and the circadian clock in different organisms other than plants. However, the nature of the Cu homeostasis influence on chronobiology remains elusive. Cytosolic Cu content could oscillate since Cu regu…

GeneticsChronobiologybiologyCircadian clockArabidopsisPlant physiologyEndogenyPlant Sciencebiology.organism_classificationModels BiologicalBacterial circadian rhythmsCell biologyCircadian RhythmArticle AddendumPhenotypeSeedlingsArabidopsisCircadian ClocksHomeostasisMYBCircadian rhythmLuciferasesPromoter Regions GeneticCopperPlant signalingbehavior
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340 EPIGENETIC ANALYSIS OF DEVELOPMENTALLY IMPORTANT GENES IN BOVINE OOCYTES OF DIFFERENT ORIGINS

2010

A critical step in assisted reproductive technologies (ART) is the IVM of oocytes. The quality of the oocyte is crucial for successful fertilization and subsequent embryo development. Studies in bovine ART, and epidemiological studies in children from ART, reveal a degree of abnormal development thought to be primarily caused by aberrant DNA methylation patterns in imprinted and non-imprinted genes. Due to the inherent similarities in bovine and human preimplantation embryonic development, bovine oocyte and embryo development is increasingly being used as a model for human development. The goal of this project is to investigate the effects of specific IVM conditions on the DNA methylation …

GeneticsEmbryoReproductive technologyBiologyOocyteOogenesisOxygen tensionAndrologyEndocrinologyDifferentially methylated regionsmedicine.anatomical_structureReproductive MedicineDNA methylationGeneticsmedicineAnimal Science and ZoologyGenomic imprintingMolecular BiologyDevelopmental BiologyBiotechnologyReproduction, Fertility and Development
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Specific roles of 5′ RNA secondary structures in stabilizing transcripts in chloroplasts

2005

RNA secondary structures, e.g. stem-loops that are often found at the 5' and 3' ends of mRNAs, are in many cases known to be crucial for transcript stability but their role in prolonging the lifetime of transcripts remains elusive. In this study we show for an essential RNA-stabilizing stem-loop at the 5' end of rbcL gene transcripts in Chlamydomonas that it neither prevents ribonucleases from binding to the RNA nor impedes their movement along the RNA strand. The stem-loop has a formative function in that it mediates folding of a short sequence around its base into a specific RNA conformation, consisting of a helical and single-stranded region, i.e. the real structure required for longevit…

GeneticsFive-prime capBase SequenceRNA ChloroplastRNA StabilityRibulose-Bisphosphate CarboxylaseTrans-splicingRNA ConformationChlamydomonasMolecular Sequence DataIntronRNABiologyArticleCell biologyAntisense RNARNA silencingRNA editingGeneticsAnimalsNucleic Acid ConformationRNA Messenger5' Untranslated RegionsNucleic Acids Research
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Differential expression of SUC genes: A question of bases

1994

Non-coding nucleotide sequences located 5' upstream of the transcriptional start site play an essential role in gene expression as they contain binding sites for transcription and regulatory factors. The yeast SUC gene family is a useful model to study the influence that nucleotide exchanges within the promoter regions have on their expression, since (i) these genes, regulated by glucose repression, are differentially transcribed (invertase activity produced by distinct SUC genes may show variations of about 10-fold); and (ii) promoter sequences of SUC3, SUC4, SUC5 and SUC7 are more than 99% homologous, showing only six base exchanges among all of them. Comparison of these nucleotide exchan…

GeneticsGlycoside Hydrolasesbeta-FructofuranosidaseGenes FungalSaccharomyces cerevisiaeNucleic acid sequenceGenetic VariationSaccharomyces cerevisiaeBiologybiology.organism_classificationMicrobiologyInfectious DiseasesPlasmidTranscription (biology)Gene Expression Regulation FungalMultigene FamilyGene expressionGene familyBinding sitePromoter Regions GeneticGeneFEMS Microbiology Reviews
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Interleukin-10 promoter polymorphism in sporadic Alzheimer's disease.

2003

Proinflammatory cytokines and acute-phase proteins play an important role in Alzheimer's disease (AD) neurodegeneration, and common polymorphisms of genes controlling their high production have been shown to be associated with AD. Thus, AD patients display a proinflammatory genotype and the control of inflammation might play a protective role in AD development. By sequence-specific probes, we have evaluated the role of anti-inflammatory cytokine interleukin(IL)-10 in AD, by analysing in 132 AD patients and 213 healthy controls the prevalence of three different haplotypes, involving three single-nucleotide polymorphisms (SNPs) at -1082 (G--A), -819 (C--T) and -592 (C--A) nucleotides of IL-10…

GeneticsInflammationImmunologyHaplotypeInterleukinSingle-nucleotide polymorphismBiologyProinflammatory cytokineInterleukin-10Interleukin 10Alzheimer DiseaseImmunologyGenotypeGeneticsSNPHumansAllelePromoter Regions GeneticGenetics (clinical)Genes and immunity
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