Search results for "RICH"

showing 10 items of 3360 documents

Mining virulence genes using metagenomics.

2011

When a bacterial genome is compared to the metagenome of an environment it inhabits, most genes recruit at high sequence identity. In free-living bacteria (for instance marine bacteria compared against the ocean metagenome) certain genomic regions are totally absent in recruitment plots, representing therefore genes unique to individual bacterial isolates. We show that these Metagenomic Islands (MIs) are also visible in bacteria living in human hosts when their genomes are compared to sequences from the human microbiome, despite the compartmentalized structure of human-related environments such as the gut. From an applied point of view, MIs of human pathogens (e.g. those identified in enter…

ScienceVirulenceBacterial genome sizeBiologyGenomeMicrobiologyMicrobiologyMicrobiomeBiologyGenome EvolutionComparative genomicsGeneticsEscherichia ColiMultidisciplinaryBacteriaVirulenceQHuman microbiomeRGenomicsPathogenicity islandBacterial PathogensMetagenomicsMicrobial EvolutionMedicineMetagenomicsGenome BacterialResearch ArticlePLoS ONE
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La Promozione della Salute nelle scuole: misure antropometriche in un campione di una popolazione scolastica di un Comune Siciliano.

2012

Scuole Promozione della Salute misure antropometricheSettore MED/42 - Igiene Generale E Applicata
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The impact of wood-derived biochar on the survival of Trichoderma spp. and growth of Secale cereale L. in sandy soil

2018

The interrelations between biochar (BC) and soil microbiota remain unclear. Addressing this will be important for understanding how BC affects soil properties and plant growth. Here, we tested the ...

SecalePlant growth04 agricultural and veterinary sciences010501 environmental sciencesBiologybiology.organism_classificationTrichoderma spp01 natural sciencesAgronomyInsect ScienceTrichodermaBiochar040103 agronomy & agriculture0401 agriculture forestry and fisheriesSoil propertiesAgronomy and Crop Science0105 earth and related environmental sciencesBiocontrol Science and Technology
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Sharp estimates and saturation phenomena for a nonlocal eigenvalue problem

2011

Abstract We determine the shape which minimizes, among domains with given measure, the first eigenvalue of a nonlocal operator consisting of a perturbation of the standard Dirichlet Laplacian by an integral of the unknown function. We show that this problem displays a saturation behaviour in that the corresponding value of the minimal eigenvalue increases with the weight affecting the average up to a (finite) critical value of this weight, and then remains constant. This critical point corresponds to a transition between optimal shapes, from one ball as in the Faber–Krahn inequality to two equal balls.

SecondaryMathematics(all)General MathematicsEigenvalue010102 general mathematicsMathematical analysisPerturbation (astronomy)SaturationMathematics::Spectral TheoryCritical value01 natural sciencesCritical point (mathematics)010101 applied mathematicsDirichlet eigenvalueShape optimizationSettore MAT/05 - Analisi MatematicaDirichlet laplacianBall (bearing)Rayleigh–Faber–Krahn inequality0101 mathematicsNonlocalPrimaryEigenvalues and eigenvectorsMathematicsAdvances in Mathematics
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Next-Generation Sequencing-Based RiboMethSeq  Protocol for Analysis of tRNA 2'-O-Methylation.

2016

Analysis of RNA modifications by traditional physico-chemical approaches is labor  intensive,  requires  substantial  amounts  of  input  material  and  only  allows  site-by-site  measurements.  The  recent  development  of  qualitative  and  quantitative  approaches  based  on   next-generation sequencing (NGS) opens new perspectives for the analysis of various cellular RNA  species.  The  Illumina  sequencing-based  RiboMethSeq  protocol  was  initially  developed  and  successfully applied for mapping of ribosomal RNA (rRNA) 2'-O-methylations. This method also  gives excellent results in the quantitative analysis of rRNA modifications in different species and  under varying growth condi…

Sequence Analysis RNAComputational BiologyHigh-Throughput Nucleotide Sequencing2′-O-methylationhigh-throughput sequencingRNA FungalSaccharomyces cerevisiaeMethylationArticledeleted strainRNA BacterialRNA TransferTRM3Escherichia coliTrmHtRNARiboMethSeqBiomolecules
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Escherichia coli possesses two homologous anaerobic C4-dicarboxylate membrane transporters (DcuA and DcuB) distinct from the aerobic dicarboxylate tr…

1994

The nucleotide sequences of two Escherichia coli genes, dcuA and dcuB (formerly designated genA and genF), have been shown to encode highly homologous products, M(r) 45,751 and 47,935 (434 and 446 amino acid residues) with 36% sequence identity (63% similarity). These proteins have a high proportion (approximately 61%) of hydrophobic residues and are probably members of a new group of integral inner membrane proteins. The locations of the dcu genes, one upstream of the aspartase gene (dcuA-aspA) and the other downstream of the anaerobic fumarase gene (fumB-dcuB), suggested that they may function in the anaerobic transport of C4-dicarboxylic acids. Growth tests and transport studies with mut…

Sequence analysisMolecular Sequence DataMutantSuccinic AcidBiologymedicine.disease_causeMicrobiologyProtein Structure SecondarySubstrate SpecificityProtein structureBacterial ProteinsFumaratesEscherichia colimedicineAmino Acid SequenceAnaerobiosisMolecular BiologyGeneEscherichia coliPeptide sequenceDicarboxylic Acid Transporterschemistry.chemical_classificationAspartic AcidBase SequenceSequence Homology Amino AcidEscherichia coli ProteinsMembrane ProteinsBiological TransportSuccinatesSequence Analysis DNAAerobiosisAmino acidRepressor ProteinschemistryBiochemistryMembrane proteinGenes BacterialCarrier ProteinsResearch ArticleTranscription FactorsJournal of Bacteriology
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Improved acid tolerance of a recombinant strain of Escherichia coli expressing genes from the acidophilic bacterium Oenococcus oeni.

2001

Aims:Oenococcus oeni is a lactic acid bacterium used in wine fermentation. Two open reading frames (orfB and orfC) were identified in the upstream region of the hsp18 gene, encoding the small heat-shock protein Lo18. Expression of these genes in conditions of acid stress was studied in Escherichia coli. Methods and Results: Sequence analysis showed that orfB encodes a putative transcriptional regulator of the LysR family. The protein encoded by orfC shares homologies with multi-drug resistance systems. Heterologous expression of orfB, orfC and hsp18 genes in Escherichia coli significantly enhanced the viability of the host strain under acidic conditions. Conclusions: It was demonstrated tha…

Sequence analysisMolecular Sequence DataRestriction MappingDNA RecombinantGene Expressionmedicine.disease_causeApplied Microbiology and BiotechnologyMicrobiologyOpen Reading FramesBacterial ProteinsmedicineEscherichia coliAmino Acid SequenceEscherichia coliGeneHeat-Shock ProteinsOenococcus oeniGeneticsbiologyBase Sequencebiology.organism_classificationEnterobacteriaceaeAdaptation PhysiologicalGram-Positive CocciOpen reading frameGenes BacterialHeterologous expressionGenetic EngineeringAcidsOenococcusCell DivisionLeuconostocPlasmidsLetters in applied microbiology
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Banach spaces of general Dirichlet series

2018

Abstract We study when the spaces of general Dirichlet series bounded on a half plane are Banach spaces, and show that some of those classes are isometrically isomorphic between themselves. In a precise way, let { λ n } be a strictly increasing sequence of positive real numbers such that lim n → ∞ ⁡ λ n = ∞ . We denote by H ∞ ( λ n ) the complex normed space of all Dirichlet series D ( s ) = ∑ n b n λ n − s , which are convergent and bounded on the half plane [ Re s > 0 ] , endowed with the norm ‖ D ‖ ∞ = sup Re s > 0 ⁡ | D ( s ) | . If (⁎) there exists q > 0 such that inf n ⁡ ( λ n + 1 q − λ n q ) > 0 , then H ∞ ( λ n ) is a Banach space. Further, if there exists a strictly increasing sequ…

SequenceApplied Mathematics010102 general mathematicsBanach space01 natural sciences010101 applied mathematicsCombinatoricssymbols.namesakeBounded functionsymbolsLinear independence0101 mathematicsPositive real numbersGeneral Dirichlet seriesAnalysisDirichlet seriesMathematicsNormed vector spaceJournal of Mathematical Analysis and Applications
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A generalized porous medium equation related to some singular quasilinear problems

2014

Abstract In this paper we study the existence and nonexistence of solutions for a Dirichlet boundary value problem whose model is { − ∑ m = 1 ∞ a m Δ u m = f in  Ω u = 0 on  ∂ Ω , where Ω is a bounded domain of R N , a m is a sequence of nonnegative real numbers, and f is in L q ( Ω ) , q > N 2 .

SequencePure mathematicsPartial differential equationApplied MathematicsMathematics::Number TheoryMathematical analysisDomain (mathematical analysis)Dirichlet distributionElliptic curvesymbols.namesakeMathematics - Analysis of PDEsBounded functionsymbolsFOS: MathematicsBoundary value problemAnalysisMathematicsReal numberAnalysis of PDEs (math.AP)
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A Smart Sensing Method for Real- Time Monitoring of Low Voltage Series-Arc-Fault

2020

This paper proposes a smart sensing method for real-time monitoring of low voltage series arc fault. It is based on the wavelet coefficient mean-difference algorithm and the four spikes appearing within two fundamental periods criterion with adaptive threshold. The method also uses the hard thresholding wavelet denoising with the universal threshold. An arc fault factor and a load adaptation factor are introduced and combined with a correction factor, so allowing the selection of the adaptive threshold in real-time and the series arc fault detection.

Series arc faultSeries (mathematics)Computer science020208 electrical & electronic engineeringArc-fault circuit interrupter02 engineering and technologyArc fault current interrupter (AFCI)ThresholdingSettore ING-IND/31 - ElettrotecnicaWavelet0202 electrical engineering electronic engineering information engineeringElectronic engineeringWavelet denoisingSettore ING-INF/07 - Misure Elettriche E ElettronicheLow voltagearc fault detection devices (AFDD)2020 IEEE 20th Mediterranean Electrotechnical Conference ( MELECON)
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