Search results for "RIP"

showing 10 items of 9780 documents

No exception to the rule: Candidatus Portiera aleyrodidarum cell wall revisited

2014

International audience; Many insect endosymbionts described so far are gram-negative bacteria. Primary endosymbionts are obligatory bacteria usually harboured by insects inside vacuoles in specialized cells called bacteriocytes. This combination produces a typical three-membrane system with one membrane derived from the insect vacuole and the other two from the bacterial gram-negative cell envelope, composed by the cell wall (the outer membrane plus the periplasmic space) and the plasma membrane (the inner membrane). For the last 21 years, the primary endosymbiont of whiteflies 'Candidatus Portiera aleyrodidarum' was considered an exception to this rule. Previous works stated that only two …

0106 biological sciencesGram-negative bacteriacell envelopeCandidatus Carsonella ruddii[SDV]Life Sciences [q-bio]Bemisia tabaci endosymbiont01 natural sciencesMicrobiologyMicrobiologyHemipteraCell membrane03 medical and health sciencesMicroscopy Electron TransmissionCell WallGeneticsmedicineAnimalsInner membraneMolecular Biology030304 developmental biology0303 health sciencesbiologyfungiPeriplasmic spacebiochemical phenomena metabolism and nutritionbiology.organism_classificationHalomonadaceaemedicine.anatomical_structureGenes Bacterialendosymbiont membranesCandidatusbacteriaCell envelopeBacterial outer membrane010606 plant biology & botany
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Isolation and characterization of a Vitis vinifera transcription factor, VvWRKY1, and its effect on responses to fungal pathogens in transgenic tobac…

2007

International audience; Pathogen attack represents a major problem for viticulture and for agriculture in general. At present, the use of phytochemicals is more and more restrictive, and therefore it is becoming essential to control disease by having a thorough knowledge of resistance mechanisms. The present work focused on the trans-regulatory proteins potentially involved in the control of the plant defence response, the WRKY proteins. A full-length cDNA, designated VvWRKY1, was isolated from a grape berry library (Vitis vinifera L. cv. Cabernet Sauvignon). It encodes a polypeptide of 151 amino acids whose structure is characteristic of group IIc WRKY proteins. VvWRKY1 gene expression in …

0106 biological sciencesGénomique et Biotechnologie des FruitsPhysiologyTransgenesalicylic acid[SDV]Life Sciences [q-bio]Amino Acid MotifsMolecular Sequence DataWRKY transcription factorPlant ScienceGenetically modified cropsBiology01 natural sciences03 medical and health scienceschemistry.chemical_compoundplant resistance to pathogensGene Expression Regulation PlantComplementary DNABotanyGene expressionTobacco[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyVitisCloning MolecularPathogen030304 developmental biologyPlant Proteins2. Zero hungerGeneticschemistry.chemical_classification0303 health sciencesBase SequenceFungifood and beveragesPlants Genetically ModifiedWRKY protein domainImmunity InnateAmino acid[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacychemistrySalicylic acid010606 plant biology & botanyTranscription Factors
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Impact of Pressurized Liquid Extraction and pH on Protein Yield, Changes in Molecular Size Distribution and Antioxidant Compounds Recovery from Spiru…

2021

The research aims to extract nutrients and bioactive compounds from spirulina using a non-toxic, environmentally friendly and efficient method—Pressurized Liquid Extraction (PLE). In this work, Response Surface Methodology (RSM)–Central Composite Design (CCD) was used to evaluate and optimize the extraction time (5–15 min), temperature (20–60 °C) and pH (4–10) during PLE extraction (103.4 bars). The multi-factor optimization results of the RSM-CCD showed that under the pressure of 103.4 bars, the optimal conditions to recover the highest content of bioactive compounds were 10 min, 40 °C and pH 4. Furthermore, the compounds and antioxidant capacity of PLE and non-pressurized extraction extra…

0106 biological sciencesHealth (social science)AntioxidantPLEmedicine.medical_treatmentTP1-1185Plant Science01 natural sciencesHealth Professions (miscellaneous)MicrobiologyArticleCinnamic acidchemistry.chemical_compoundTriple TOF–LC–MS–MS0404 agricultural biotechnology010608 biotechnologymedicineResponse surface methodologySodium dodecyl sulfatePolyacrylamide gel electrophoresisCarotenoidRSM-CCDchemistry.chemical_classificationbioactive compoundsChromatographyChemical technologymicroalgaeExtraction (chemistry)04 agricultural and veterinary sciences040401 food science6. Clean waterchemistryPolyphenolSDS-PAGEFood ScienceFoods
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An annotated checklist of freshwater Copepoda (Crustacea, Hexanauplia) from continental Ecuador and the Galapagos Archipelago.

2019

An annotated checklist of the free-living freshwater Copepoda recorded in different regions in Ecuador (including the Amazon, the Andes, the coastal region, and the Galapagos Islands) is here provided. We revised all published records, critically evaluated the validity of each taxon and provided short taxonomic and biogeographical remarks for each one. A total of 27 taxa have been reported, including species and records at the generic level only. The species and taxa identified only up to the generic level belong to five families and 14 genera. The Cyclopoida is the most diverse group with 16 records belonging to species (or identified to the generic level only) and eight genera, followed b…

0106 biological sciencesHexanaupliaSettore BIO/05 - ZoologiaBiodiversityCyclopoida01 natural sciencesCrustacealcsh:ZoologyBilaterialcsh:QL1-991species richnessHarpacticoidaCalanoidaInvertebratageography.geographical_feature_categorybiologyEcologyAmazon rainforestCephalornisHarpacticoidaBiodiversityNeotropicfreshwater CopepodaChecklistBiogeographyArchipelagoEcuadorCoelenterataNeotropicsArthropodaNephrozoa010607 zoologyProtostomiaCircumscriptional names of the taxon underCopepodaFaunistics & DistributionSystematicsgeographical distributionAnimaliaCalanoidaEcology Evolution Behavior and Systematicsgeography010604 marine biology & hydrobiologyCyclopoidaSouth Americabiology.organism_classificationTaxonNotchiaEcdysozoaAnimal Science and ZoologySpecies richnessCatalogues and ChecklistsAmericasMaxillopodaZooKeys
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Response of grapevine (Cabernet Sauvignon cv) to above ground and subsurface drip irrigation under arid conditions

2018

Abstract The response of wine grapes to irrigation systems was investigated in a Cabernet Sauvignon/140 Ru vineyard in sandy loam soil in Sicily during a two-year study. Two different drip irrigation systems were evaluated: one surface drip and two subsurface drip irrigation systems, with the trickle line located at different distances from vine trunks. Vegetative and quantitative parameters, must quality and root distribution were compared among irrigation treatments. During the two study years, irrigation of grapevines via a subsurface drip system resulted in greater water use efficiency without affecting must composition. Establishing the trickle line near the trunk positively influenced…

0106 biological sciencesIrrigationDeficit irrigationSoil ScienceDrip irrigation01 natural sciencesVineyardRegulated deficit irrigationYield (wine)Root distributionWater-use efficiencyTRICKLEEarth-Surface ProcessesWater Science and TechnologyPredawn leaf water potentialPredawn leaf water potential; Regulated deficit irrigation; Root distribution; Water use efficiency; Yield and grape quality;Water use efficiency04 agricultural and veterinary sciencesSettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeAgronomyLoamYield and grape quality040103 agronomy & agriculture0401 agriculture forestry and fisheriesEnvironmental scienceAgronomy and Crop Science010606 plant biology & botany
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CRISPR-mediated strand displacement logic circuits with toehold-free DNA

2021

DNA nanotechnology, and DNA computing in particular, has grown extensively over the past decade to end with a variety of functional stable structures and dynamic circuits. However, the use as designer elements of regular DNA pieces, perfectly complementary double strands, has remained elusive. Here, we report the exploitation of CRISPR-Cas systems to engineer logic circuits based on isothermal strand displacement that perform with toehold-free double-stranded DNA. We designed and implemented molecular converters for signal detection and amplification, showing good interoperability between enzymatic and nonenzymatic processes. Overall, these results contribute to enlarge the repertoire of su…

0106 biological sciencesLetterTranscription GeneticComputer scienceStreptococcus pyogenesRibonuclease HBiomedical EngineeringDNA Single-StrandedNanotechnology01 natural sciencesBiochemistry Genetics and Molecular Biology (miscellaneous)Displacement (vector)law.invention03 medical and health sciencesSynthetic biologychemistry.chemical_compoundComputers MolecularDNA computinglaw010608 biotechnologyCRISPR-Associated Protein 9Biological computingDNA nanotechnologyCRISPRNanotechnologyClustered Regularly Interspaced Short Palindromic RepeatsGene Regulatory NetworksDNA nanotechnologySynthetic biology030304 developmental biologyElectronic circuit0303 health sciencesGeneral MedicineRibonuclease PancreaticchemistryLogic gatebiological computingsynthetic biologyCRISPR-Cas SystemsEndopeptidase KGenetic EngineeringDNARNA Guide Kinetoplastida
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Use of Leaf and Fruit Morphometric Analysis to Identify and Classify White Mulberry (Morus alba L.) Genotypes

2018

Digital image analysis and multivariate data analysis were used in this study to identify a set of leaf and fruit morphometric traits to discriminate white mulberry (Morus alba L.) cultivars. The trial was conducted using three- to five-year-old potted cuttings of several white mulberry cultivars. 32 leaf morphometric descriptors were recorded in 2011 and 2012 from 11 mulberry cultivars using image analysis of scanned leaves, whereas six fruit descriptors were recorded in 2011 from nine mulberry cultivars. Linear discriminant analysis (LDA) was used to identify a subset of measured variables that could discriminate the cultivars in trial. Biplot analysis, followed by cluster analysis, was p…

0106 biological sciencesLinear discriminant analysifood.ingredientlinear discriminant analysisBiplotPlant ScienceBiology01 natural sciencesCutting0404 agricultural biotechnologyfoodGenotypedescriptordigital image analysisLeaf sizeCultivarlcsh:Agriculture (General)MorphometricsMultivariate analysi<i>Morus alba</i>Digital image analysi04 agricultural and veterinary sciencesLinear discriminant analysislcsh:S1-972040401 food scienceMorus albaHorticulturemultivariate analysisWhite MulberryAgronomy and Crop Sciencebiplot010606 plant biology & botanyFood ScienceAgriculture
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Windthrow in streamside key habitats: Effects of buffer strip width and selective logging

2020

Abstract Streamside forests are preserved from clear-cut logging in production forests and protected with uncut buffer strips in many countries. However, buffer strips often remain narrow due to economic reasons and, therefore, provide weak protection against adverse edge effects of clear-cuts and are vulnerable to windthrow. Selective logging of buffer strips is sometimes allowed to reduce their costs, but the decreased tree density may expose the buffer to higher occurrence of windthrow. We used a replicated two-factor experiment to assess the effects of buffer width (15 m or 30 m) and selective logging (0% or 30% of the basal area removed) on the risk of windthrow in boreal streamside fo…

0106 biological sciencesLoggingForestryBuffer stripForestryWindthrowTree densityManagement Monitoring Policy and Law010603 evolutionary biology01 natural sciencesBasal areaBorealHabitatEnvironmental science010606 plant biology & botanyNature and Landscape ConservationForest Ecology and Management
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Reverse-engineering the Arabidopsis thaliana transcriptional network under changing environmental conditions

2009

46 pages, 4 tables, 6 figures, 3 additinoal files.

0106 biological sciencesMESH: Genome PlantArabidopsis thalianaGene regulatory networkArabidopsis01 natural sciencesTranscriptomeGene Expression Regulation PlantArabidopsisMESH: Gene Expression Regulation DevelopmentalCluster AnalysisGene Regulatory NetworksMESH: ArabidopsisMESH: EcosystemMESH: Models GeneticOligonucleotide Array Sequence AnalysisMESH: Gene Regulatory NetworksGenetics0303 health sciencesMESH: Stress MechanicalbiologyMESH: Genomicsfood and beveragesGene Expression Regulation DevelopmentalGenomicsPhenotypeAlgorithmsGenome PlantMESH: MutationSystems biologyGenomicsMESH: AlgorithmsComputational biologyMESH: Arabidopsis ProteinsMESH: Phenotype03 medical and health sciencesMESH: Gene Expression Profiling[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyMESH: Gene Expression Regulation PlantEcosystem030304 developmental biologyModels GeneticMicroarray analysis techniquesArabidopsis ProteinsGene Expression ProfilingResearchfungiRobustness (evolution)biology.organism_classificationMESH: Cluster AnalysisGene expression profilingMutationMESH: Oligonucleotide Array Sequence AnalysisStress Mechanical010606 plant biology & botany
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Spatial monitoring of gene activity in extraradical and intraradical developmental stages of arbuscular mycorrhizal fungi by direct fluorescent in si…

2008

International audience; Gene expression profiling based on tissue extracts gives only limited information about genes associated with complex developmental processes such as those implicated in fungal interactions with plant roots during arbuscular mycorrhiza development and function. To overcome this drawback, a direct fluorescent in situ RT-PCR methodology was developed for spatial mapping of gene expression in different presymbiotic and symbiotic structures of an arbuscular mycorrhizal fungus. Transcript detection was optimized by targeting the LSU rRNA gene of Glomus intraradices and monitoring expression of a stearoyl-CoA-desaturase gene that is consistently expressed at high levels in…

0106 biological sciencesMYCORHIZES A ARBUSCULESGENE EXPRESSIONHyphaGLOMUS INTRARADICESDIRECT FLUORESCENT IN SITU RT-PCR01 natural sciencesMicrobiologyPlant RootsARBUSCULAR MYCORRHIZAL FUNGIFungal ProteinsSUPEROXIDE DISMUTASE03 medical and health sciencesFungal StructuresGene Expression Regulation FungalMycorrhizaeBotanyGene expressionGeneticsMedicagoCONFOCAL MICROSCOPYGene030304 developmental biologyDNA PrimersFluorescent DyesPeptidylprolyl isomerase0303 health sciences[SDV.GEN]Life Sciences [q-bio]/GeneticsMicroscopy ConfocalbiologyPEPTIDYLPROPYL ISOMERASEReverse Transcriptase Polymerase Chain ReactionGene Expression ProfilingfungiSYMBIOSISGene Expression Regulation DevelopmentalPeptidylprolyl Isomerasebiology.organism_classificationMedicago truncatulaCell biologyArbuscular mycorrhizaGene expression profilingSTEAROYL-CoA-DESATURASEXanthenesMEDICAGO TRUNCATULAStearoyl-CoA Desaturase010606 plant biology & botany
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