Search results for "ROT"

showing 10 items of 41723 documents

Identification of Casein Phosphopeptides in β-casein and Commercial Hydrolysed Casein by Mass Spectrometry

2006

Casein phosphopeptides (CPPs) in commercial hydrolysed casein (CE90CPP) and in β-CN (β-CN) after simulated gastrointestinal digestion (gastric stage pepsin, pH =2, 37°C 2h) and intestinal stage (pancreatic-bile extract, pH =5.2, 37°C 2h) were sequenced by on-line reversed-phase high performance liquid chromatography coupled to electrospray ionisation tandem mass spectrometry (RP-HPLC-ESIMS/MS). In β-CN digest five peptides that contained four to five phosphate groups and the cluster sequence SpSpSpEE (residues 17-21) were identified. All CPPs with one exception β-CN(1-24)4P, had the protein fragment β-CN(1-25)4P, which is one of the main CPPs produced in vivo digestion of casein and the re…

0106 biological sciencesChromatographybiologyPhosphopeptideChemistryGeneral Chemical Engineering04 agricultural and veterinary sciencesMass spectrometryTandem mass spectrometry040401 food science01 natural sciencesHigh-performance liquid chromatographyIndustrial and Manufacturing Engineering0404 agricultural biotechnologyPepsinBiochemistry010608 biotechnologyCaseinbiology.proteinProtein FragmentDigestionFood ScienceFood Science and Technology International
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Linking extreme seasonality and gene expression in arctic marine protists

2021

ABSTRACTAt high latitudes, strong seasonal differences in light availability affect marine organisms and restrict the timing of ecosystem processes. Marine protists are key players in Arctic aquatic ecosystems, yet little is known about their ecological roles over yearly cycles. This is especially true for the dark polar night period, which up until recently was assumed to be devoid of biological activity. A 12 million transcripts catalogue was built from 0.45-10 μm protist assemblages sampled over 13 months in a time series station in an arctic fjord in Svalbard. Community gene expression was correlated with seasonality, with light as the main driving factor. Transcript diversity and evenn…

0106 biological sciencesClimate changemicrobial eukaryotesBiologyunicellular eukaryotesmedicine.disease_cause01 natural sciences03 medical and health sciencespolar daymedicineEcosystem14. Life underwater030304 developmental biology[SDV.EE]Life Sciences [q-bio]/Ecology environment0303 health sciencesmetatranscriptomicsPolar nightpolar nightEcology010604 marine biology & hydrobiologyAquatic ecosystemProtistSeasonalitymedicine.disease[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]Arctic13. Climate actionSpecies evennesstime seriesgeographic locations
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Arginase induction represses gall development during clubroot infection in Arabidopsis.

2012

Arginase induction can play a defensive role through the reduction of arginine availability for phytophageous insects. Arginase activity is also induced during gall growth caused by Plasmodiophora brassicae infection in roots of Arabidopsis thaliana; however, its possible role in this context has been unclear. We report here that the mutation of the arginase-encoding gene ARGAH2 abrogates clubroot-induced arginase activity and results in enhanced gall size in infected roots, suggesting that arginase plays a defensive role. Induction of arginase activity in infected roots was impaired in the jar1 mutant, highlighting a link between the arginase response to clubroot and jasmonate signaling. C…

0106 biological sciencesClubrootArabidopsis thalianaPhysiologyPyridinesArabidopsisplantPlant SciencePlasmodiophorida01 natural sciencesPlant RootsCallogenesisPlant Epidermischemistry.chemical_compoundJasmonateArabidopsisPlant TumorsGallArabidopsis thalianaJasmonateAmino AcidsComputingMilieux_MISCELLANEOUSchemistry.chemical_classification0303 health sciencesJasmonic acidfood and beveragesGeneral MedicineCell biologyArginasePLANT SCIENCESOrgan SpecificityPlasmodiophora brassicaeEnzyme Inductionnitric-oxideCyclopentanesBiologyHydroxylationAmidohydrolasesClubroot03 medical and health sciencesAuxinBotanymedicinethalianaOxylipinsIsoleucine030304 developmental biologydiseaseArginaseArabidopsis Proteinsfungijasmonic acid[SDV.BBM.BM]Life Sciences [q-bio]/Biochemistry Molecular Biology/Molecular biologyplasmodiophora-brassicaeCell BiologyDiazonium Compoundsbiology.organism_classificationmedicine.diseaserootarginine catabolism[SDV.BV.AP]Life Sciences [q-bio]/Vegetal Biology/Plant breedingchemistryMutationidentificationaccumulation010606 plant biology & botanyPlantcell physiology
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On several species of Oswaldella Stechow, 1919 (Cnidaria, Hydrozoa), including the description of a new species

2018

Oswaldella is the most speciose genus of Antarctic hydroids, being one of the most characteristic genera of hydrozoans of the Antarctic benthic marine ecosystem. A relatively high number of taxonomic characters allow species identification, but some key ones are difficult to study properly with a light microscope. In order to improve knowledge of species of the genus, a SEM survey of five of the 27 known nominal species of Oswaldella was carried out, including type material of O. grandis and O. terranovae. The study has revealed no significant differences between O. stepanjantsae and O. terranovae and, consequently, the former is considered a junior synonym of the latter. The type material …

0106 biological sciencesCnidariabiology010604 marine biology & hydrobiologyAntarctic RegionsProtistOswaldellaZoologybiology.organism_classificationmedicine.disease_cause010603 evolutionary biology01 natural sciencesHydrozoaBenthic zoneGenusmedicineAnimalsAnimal Science and ZoologyMarine ecosystemTaxonomy (biology)Animal DistributionEcosystemEcology Evolution Behavior and SystematicsHydrozoaZootaxa
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Degradation in landscape matrix has diverse impacts on diversity in protected areas.

2017

Introduction: A main goal of protected areas is to maintain species diversity and the integrity of biological assemblages. Intensifying land use in the matrix surrounding protected areas creates a challenge for biodiversity conservation. Earlier studies have mainly focused on taxonomic diversity within protected areas. However, functional and especially phylogenetic diversities are less studied phenomena, especially with respect to the impacts of the matrix that surrounds protected areas. Phylogenetic diversity refers to the range of evolutionary lineages, the maintenance of which ensures that future evolutionary potential is safeguarded. Functional diversity refers to the range of ecologic…

0106 biological sciencesConservation geneticsConservation BiologyBiodiversitylcsh:MedicinemaankäyttöForestsAnimal Phylogenetics01 natural scienceslcsh:ScienceSpecies diversityConservation ScienceData ManagementMultidisciplinaryEcologyEcologyEukaryotaBiodiversityrespiratory systemta4112Terrestrial EnvironmentsPhylogeneticsGeographyHabitatVertebratesConservation GeneticsConservation geneticsResearch ArticleComputer and Information SciencesConservation of Natural ResourcesEcological MetricsForest managementAnimal phylogenetics010603 evolutionary biologyEcosystemsBirdssuojelualueetGeneticsAnimalsEcosystemEvolutionary SystematicsEcosystemTaxonomyEvolutionary BiologyLand use010604 marine biology & hydrobiologyEcology and Environmental Scienceslcsh:ROrganismsSpecies diversityland useBiology and Life SciencesSpecies Diversity15. Life on landbiodiversiteettiPhylogenetic diversity13. Climate actionConservation scienceAmniotesta1181lcsh:Qprotected areasZoologyhuman activitiesPLoS ONE
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The genome sequencing of an albino Western lowland gorilla reveals inbreeding in the wild

2013

This article is published under license to BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License.-- et al.

0106 biological sciencesConservation geneticsMalegenotype phenotype correlationGorillaComputingMilieux_LEGALASPECTSOFCOMPUTINGarginineGenoma humà01 natural sciencesOculocutaneous albinism type 4single nucleotide polymorphismAlbinismegenetic variabilityGorillaInbreedinggenetic conservationGenetics0303 health sciencesGenomebiologyarticlecopy number variationHigh-Throughput Nucleotide SequencingSLC45A2 geneGenomicszygosityOculocutaneous albinismFloquet de neu (Goril·la)AlbinismFemaleBiotechnologyamino acid substitutionResearch ArticleSLC45A2Gorilla gorilla gorillaHeterozygoteAlbinismMolecular Sequence Datacomparative genomic hybridizationgene sequenceConservation010603 evolutionary biology03 medical and health sciencesWestern lowland gorillabiology.animalmedicineGeneticsheterozygosityAnimalsAmino Acid Sequencegene030304 developmental biologygene identificationWhole genome sequencingnonhumanGorilla gorillaMembrane Transport ProteinsSequence Analysis DNA15. Life on landbiology.organism_classificationmedicine.diseaseGenòmicaData_GENERALMutationbiology.proteinGenèticaoculocutaneous albinismglycineMicrosatellite RepeatsBMC Genomics
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A multidisciplinary analytical framework to delineate spawning areas and quantify larval dispersal in coastal fish

2019

International audience; Assessing larval dispersal is essential to understand the structure and dynamics of marine populations. However, knowledge about early-life dispersal is sparse, and so is our understanding of the spawning process, perhaps the most obscure component of biphasic life cycles. Indeed, the poorly known species-specific spawning modality and early-life traits, along with the high spatio-temporal variability of the oceanic circulation experienced during larval drift, hamper our ability to properly appraise the realized connectivity of coastal fishes. Here, we propose an analytical framework which combines Lagrangian modeling, network theory, otolith analyses and biogeograph…

0106 biological sciencesConservation of Natural ResourcesOceans and SeasPopulation DynamicsCoastal fishEcosystem ManagementConservationAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesFish natal originsmedicineMediterranean SeaAnimalsDiplodus vulgarisMarine ecosystem14. Life underwaterEcosystemOtolithMarine Protected AreaLagrangian Flow Network[SDU.OCEAN]Sciences of the Universe [physics]/Ocean Atmosphere[SDV.EE]Life Sciences [q-bio]/Ecology environmentFish natal originbiologyEcology010604 marine biology & hydrobiologyFishesMarine connectivityPelagic zoneGeneral MedicineDiplodusbiology.organism_classificationPollutionCoastal fishesCoastal fishemedicine.anatomical_structureLarvaBiological dispersalMarine protected areaModels-hydrodynamicsModels-hydrodynamic
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Protected areas buffer against harvest selection and rebuild phenotypic complexity

2020

14 pages, 6 figures, 4 tables.-- This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited

0106 biological sciencesConservation of Natural ResourcesSurvivalFisheries-induced selectionPopulationFisheriesCapture–recaptureSkagerrak010603 evolutionary biology01 natural sciencesLife history theoryMark and recaptureHomarus gammarusMarine protected areasVital ratesAnimalsBody SizeHumans14. Life underwaterSize structureeducationSelection (genetic algorithm)education.field_of_studyEcologybiologyEcologyNorway010604 marine biology & hydrobiologyfungiFishesbiology.organism_classificationNephropidaeProductivity (ecology)LobsterMarine protected areaVital ratesEcological Applications
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Pleurotus opuntiae revisited e An insight to the phylogeny of dimitic Pleurotus species with emphasis on the P. djamor complex

2018

Abstract The name Pleurotus opuntiae is indiscriminately used for describing mushrooms with white to off-white to white-grey pilei with short or absent stipe and dimitic hyphal system, which grow on plants of the genera Opuntia, Yucca, Agave, Phytolacca etc. However, the outcome of the present study evidences that this name should be reserved for specimens deriving from the Mediterranean area only; an epitype originating from Italy on Opuntia ficus-indica is designated. Pertinent material was sequenced by using the internal transcribed spacer region (ITS) and found to be phylogenetically related to P. djamor from Kenya and Nigeria, while members of the P. djamor complex from other continent…

0106 biological sciencesContext (language use)Pleurotus01 natural sciences03 medical and health sciencesStipe (botany)BotanyDNA Ribosomal SpacerRNA Ribosomal 28SGeneticsCluster AnalysisInternal transcribed spacerDNA FungalRibosomal DNAEcology Evolution Behavior and SystematicsPhylogeny030304 developmental biology0303 health sciencesPleurotusbiologyMediterranean RegionSettore BIO/02 - Botanica SistematicaSequence Analysis DNAPlantsbiology.organism_classificationAgaveInfectious DiseasesTaxonGenetic distanceItalySettore BIO/03 - Botanica Ambientale E ApplicataRNA Polymerase IIFungal taxonomy ITS Multi-gene phylogeny Opuntia ficus-indica Oyster mushroom Pleurotus opuntiae epitype010606 plant biology & botany
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Challenges of ecological restoration: Lessons from forests in northern Europe

2013

The alarming rate of ecosystem degradation has raised the need for ecological restoration throughout different biomes and continents. North European forests may appear as one of the least vulnerable ecosystems from a global perspective, since forest cover is not rapidly decreasing and many ecosystem services remain at high level. However, extensive areas of northern forests are heavily exploited and have lost a major part of their biodiversity value. There is a strong requirement to restore these areas towards a more natural condition in order to meet the targets of the Convention on Biological Diversity. Several northern countries are now taking up this challenge by restoring forest biodiv…

0106 biological sciencesConvention on Biological Diversity010504 meteorology & atmospheric sciencesbusiness.industryEnvironmental resource managementBiodiversityEnvironmental restoration15. Life on land010603 evolutionary biology01 natural sciencesForest restorationEcosystem servicesGeography13. Climate actionEnvironmental protectionForest ecologyta1181Ecosystem diversitybusinessRestoration ecologyEcology Evolution Behavior and Systematics0105 earth and related environmental sciencesNature and Landscape ConservationBiological Conservation
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