Search results for "Reactants"

showing 3 items of 3 documents

Mechanistic insights into the phosphoryl transfer reaction in cyclin-dependent kinase 2: a QM/MM study

2019

AbstractCyclin-dependent kinase 2 (CDK2) is an important member of the CDK family exerting its most important function in the regulation of the cell cycle. It catalyzes the transfer of the gamma phosphate group from an ATP (adenosine triphosphate) molecule to a Serine/Threonine residue of a peptide substrate. Due to the importance of this enzyme, and protein kinases in general, a detailed understanding of the reaction mechanism is desired. Thus, in this work the phosphoryl transfer reaction catalyzed by CDK2 was revisited and studied by means of hybrid quantum mechanics/molecular mechanics (QM/MM) calculations. Our results show that the base-assisted mechanism is preferred over the substrat…

Models MolecularComposite ParticlesProtein ConformationPhysical ChemistryBiochemistry01 natural sciencesSubstrate Specificitychemistry.chemical_compoundPhosphorylationPost-Translational ModificationFree Energy0303 health sciencesMultidisciplinarybiologyKinasePhysicsQChemical ReactionsRChemistryReaction DynamicsPhysical SciencesThermodynamicsMedicineProtonsResearch ArticleChemical ElementsAtomsStereochemistryScienceMolecular Dynamics Simulation010402 general chemistryMolecular mechanicsReactantsQM/MMStructure-Activity Relationship03 medical and health sciencesCyclin-dependent kinaseParticle PhysicsNuclear PhysicsNucleons030304 developmental biologyChemical BondingCyclin-Dependent Kinase 2Cyclin-dependent kinase 2Biology and Life SciencesProteinsActive siteHydrogen BondingTransition StateBond order0104 chemical sciencesOxygenModels Chemicalchemistrybiology.proteinQuantum TheoryAdenosine triphosphate
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Magnetic Field Control of Combustion Dynamics

2016

Abstract Experimental studies and mathematical modelling of the effects of magnetic field on combustion dynamics at thermo-chemical conversion of biomass are carried out with the aim of providing control of the processes developing in the reaction zone of swirling flame. The joint research of the magnetic field effect on the combustion dynamics includes the estimation of this effect on the formation of the swirling flame dynamics, flame temperature and composition, providing analysis of the magnetic field effects on the flame characteristics. The results of experiments have shown that the magnetic field exerts the influence on the flow velocity components by enhancing a swirl motion in the …

magnetic field forcesswirling flow dynamicsMaterials science010102 general mathematicsDynamics (mechanics)General EngineeringGeneral Physics and Astronomymixing of reactantsflame compositionMechanicsCombustion01 natural scienceslcsh:QC1-999010305 fluids & plasmasMagnetic fieldPhysics::Fluid Dynamics0103 physical sciencescombustion of volatilesPhysics::Chemical Physics0101 mathematicslcsh:PhysicsLatvian Journal of Physics and Technical Sciences
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Control of the Development of Swirling Airflow Dynamics and Its Impact on Biomass Combustion Characteristics

2017

Abstract The development of the swirling flame flow field and gasification/ combustion dynamics at thermo-chemical conversion of biomass pellets has experimentally been studied using a pilot device, which combines a biomass gasifier and combustor by varying the inlet conditions of the fuel-air mixture into the combustor. Experimental modelling of the formation of the cold nonreacting swirling airflow field above the inlet nozzle of the combustor and the upstream flow formation below the inlet nozzle has been carried out to assess the influence of the inlet nozzle diameter, as well primary and secondary air supply rates on the upstream flow formation and air swirl intensity, which is highly …

swirling flow dynamicsWaste managementPhysicsQC1-999020209 energyAirflowGeneral EngineeringEnvironmental engineeringHeat outputGeneral Physics and Astronomymixing of reactantsflame composition02 engineering and technologyheat outputBiomass combustioncombustion of volatiles0202 electrical engineering electronic engineering information engineeringLatvian Journal of Physics and Technical Sciences
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