Search results for "Reaction"

showing 10 items of 6134 documents

Reaction mechanism of regioisomerization in binuclear (diaminocarbene)PdII complexes

2021

Abstract A series of binuclear PdII carbene complexes were synthesized via the treatment of cis-[PdCl2(CNXyl)2] (1) with benzo-1,3-thiazol-2-amines (2–6) and structurally characterized. In every case the reaction leads to the mixture of two regioisomers, which are able to interconvert. The study of the regioisomerization of the binuclear diaminocarbene species showed that it is a first-order reaction, that is, it occurs intramolecularly, and was analyzed with the Hammett function. Electron-withdrawing substituents in the benzothiazole moiety of the complexes as well as increasing the solvent polarity accelerate the reaction. The solvent donor strength correlates less well with the isomeriza…

Reaction mechanismMedicinal chemistryInorganic ChemistrySolventchemistry.chemical_compoundchemistryBenzothiazoleMaterials ChemistrySolvent polarityStructural isomerMoietyPhysical and Theoretical ChemistryCarbeneIsomerizationInorganica Chimica Acta
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New sulfonamide complexes with essential metal ions [Cu (II), Co (II), Ni (II) and Zn (II)]. Effect of the geometry and the metal ion on DNA binding …

2019

Abstract Mixed divalent Cu, Co, Ni and Zn complexes containing the new sulfonamide ligand N–(2–(pyridin–2–yl)ethyl)quinoline–8–sulfonamide (HQSEP) were prepared and characterized by physico-chemical techniques. The tetracoordinate [Cu(QSEP)X] [X = Br (1), Cl (2)] compounds present a seesaw geometry (τ4 = 0.56 (1) and 0.50 (2)). The Cu(II) in the [Cu(QSEP)(NO3)(MeOH)] (3) complex is five coordinate with a slightly distorted SP geometry (τ = 0.11). The [M(QSEP)(benz)] [M = Cu(II) (4), Ni(II) (5), Co(II) (6) and Zn(II) (7); benz = benzoate] compounds are configurationally isotypic. The coordination geometries of the M(II) ions can be best described as distorted SP (τ = 0.29, 0.15, 0.34 and 0.1…

Reaction mechanismMetal ions in aqueous solutionGeometry010402 general chemistry01 natural sciencesBiochemistryDivalentInorganic ChemistryMetalBovine serum albuminDNA Cleavagechemistry.chemical_classificationSulfonamidesDeoxyribonucleasesTetracoordinatebiology010405 organic chemistryChemistryLigandSerum Albumin BovineDNA0104 chemical sciencesSulfonamideMetalsvisual_artvisual_art.visual_art_mediumbiology.proteinJournal of inorganic biochemistry
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Oxygen-assisted hydroxymatairesinol dehydrogenation: a selective secondary-alcohol oxidation over a gold catalyst.

2013

Selective dehydrogenation of the biomass-derived lignan hydroxymatairesinol (HMR) to oxomatairesinol (oxoMAT) was studied over an Au/Al(2)O(3) catalyst. The reaction was carried out in a semi-batch glass reactor at 343 K under two different gas atmospheres, namely produced through synthetic air or nitrogen. The studied reaction is, in fact, an example of secondary-alcohol oxidation over an Au catalyst. Thus, the investigated reaction mechanism of HMR oxidative dehydrogenation is useful for the fundamental understanding of other secondary-alcohol dehydrogenation over Au surfaces. To investigate the elementary catalytic steps ruling both oxygen-free- and oxygen-assisted dehydrogenation of HMR…

Reaction mechanismMolecular Structure010405 organic chemistryChemistryOrganic ChemistryDiastereomerGeneral Chemistry010402 general chemistryPhotochemistry01 natural sciencesCatalysisLignans0104 chemical sciencesCatalysisOxygenAdsorptionHydroxymatairesinolAlcohol oxidationAlcoholsdehydrogenation density functional calculations gold catalysisReactivity (chemistry)DehydrogenationAdsorptionGoldOxidation-ReductionChemistry (Weinheim an der Bergstrasse, Germany)
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cis-bromination of alkynes without cationic intermediates

2005

Reaction mechanismMolecular StructureAcetyleneHydrocarbons HalogenatedChemistryElectrophilic additionStatic ElectricityCationic polymerizationHalogenationGeneral ChemistryBromineCatalysisBromine CompoundsIsomerismModels ChemicalAlkynesSolventsThermodynamicsOrganic chemistry
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Molecular dynamics simulation in aqueous solution of N -methylazetidinone as a model of β -lactam antibiotics

1999

In this article, we analyze the results of a molecular dynamics simulation in aqueous solution of the N-methylazetidinone molecule, often used to model β-lactam antibiotics. The radial distribution functions (RDFs) corresponding to the most interesting atoms, in terms of reactivity, are presented. We focus our study on the effect of a polar environment on the molecule. The solvent structure around the system is compared to the structure of β-lactam-water complexes, as obtained in a previous study of reaction mechanisms for the neutral and alkaline hydrolyses of N-methylazetidinone. Two types of complexes have been considered which are related to different hydrolysis mechanisms having simila…

Reaction mechanismMolecular dynamicsAqueous solutionChemistryComputational chemistryInorganic chemistryAb initioCluster (physics)MoleculeReactivity (chemistry)Physical and Theoretical ChemistrySolvent effectsTheoretical Chemistry Accounts: Theory, Computation, and Modeling (Theoretica Chimica Acta)
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Dithiol-Induced Oligomerization of Thiol-Protected Gold Nanoclusters

2018

Controlled synthesis of nanostructure oligomers requires detailed understanding of their wet chemistry and the forces driving the polymerization process. In this paper, we report the main factors affecting the reaction yields of a dithiol-induced synthesis of covalently bound nanocluster dimers and oligomers and present a detailed analysis of possible reaction mechanisms. We synthesize the nanocluster oligomers using monodisperse para-mercaptobenzoic acid (p-MBA)-protected gold nanoclusters with a nominal composition of Au∼250(p-MBA)n to minimize ensemble effects on size, shape, and surface structure. Ligand exchange was performed on the nanoclusters with five different dithiol linkers: 5,5…

Reaction mechanismNanostructureDispersity02 engineering and technology010402 general chemistry01 natural sciencesOligomeroligomerNanoclusterschemistry.chemical_compoundPolymer chemistryPhysical and Theoretical Chemistryta116ta114LigandDithiol021001 nanoscience & nanotechnology0104 chemical sciencesSurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialsoligomeeriGeneral EnergychemistryPolymerizationnanohiukkasetnanoparticles0210 nano-technologyJournal of Physical Chemistry C
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Trapping AsPh3 via reaction with NiS/γ-Al2O3 in the presence of H2: Reaction mechanism and kinetics

2021

International audience; Removal of As from petroleum feedstocks is an important process which can be realized using As trapping mass containing supported nickel sulfide. In order to understand the mechanism of the trapping we studied the reaction of AsPh3 with NiS/γ-Al2O3 in the presence of H2 in a batch reactor in toluene solution at 230 °C. This reaction results in formation of NiAs, benzene and H2S. Also, the intermediate species, thiophenol and diphenylsulfide, were observed. Despite formation of NiAs layer in the course of reaction, the rate of AsPh3 decomposition is not affected by the solid state diffusion up to ∼ 50 % of nickel conversion. The rate determining step in these conditio…

Reaction mechanismNickel sulfideOrder of reaction010405 organic chemistryProcess Chemistry and TechnologyThiophenolchemistry.chemical_element[CHIM.CATA]Chemical Sciences/Catalysis010402 general chemistryPhotochemistryRate-determining step01 natural sciences7. Clean energyCatalysisDearsenification0104 chemical sciencesCatalysisAs trapping masschemistry.chemical_compoundNickelchemistry13. Climate actionHydrogenolysisProtection of hydrotreatment catalysts
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Structural insight into the reaction mechanism of Pd-catalyzed nitrile hydration: Trapping the [Pd(H2O)4]2+ cation through a supramolecular complex

2016

Abstract Four new bis(oxamato)palladate(II) complexes of formula (n-Bu4N)2[Pd(2,4,6-Me3pma)2]·2CH3CN (1), (n-Bu4N)2[Pd(2,4,6-Me3pma)2]·2CH3CONH2 (2) and (n-Bu4N)4[Pd(H2O)4][Pd(4-Xpma)2]3·2CH3CONH2 with X = Br (3) and Cl (4) (2,4,6-Me3pma = N-2,4,6-trimethylphenyloxamate, 4-Brpma = N-4-bromophenyloxamate, N-4-chlorophenyloxamate and n-Bu4N+ = tetra-n-butylammonium) have been obtained and characterized by single crystal X-ray diffraction. All of them contain bis(oxamato)palladate(II) anions and bulky n-Bu4N+ cations, but compounds 3 and 4 have also the out of the ordinary [Pd(H2O)4]2+ inorganic cation. Acetonitrile and appealing acetamide are present as lattice molecules in compounds (1) and …

Reaction mechanismNitrile010405 organic chemistryChemistryStereochemistrySupramolecular chemistryReaction intermediate010402 general chemistry01 natural sciencesMedicinal chemistry0104 chemical sciencesInorganic Chemistrychemistry.chemical_compoundMaterials ChemistryHydration reactionMoleculePhysical and Theoretical ChemistryAcetonitrileAcetamideInorganica Chimica Acta
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Computational simulations on the binding and reactivity of a nitrile inhibitor of the SARS-CoV-2 main protease.

2021

We present a detailed computational analysis of the binding mode and reactivity of the novel oral inhibitor PF-07321332 developed against the SARS-CoV-2 3CL protease. Alchemical free energy calculations suggest that positions P3 and P4 could be susceptible to improvement in order to get a larger binding strength. QM/MM simulations unveil the reaction mechanism for covalent inhibition, showing that the nitrile warhead facilitates the recruitment of a water molecule for the proton transfer step.

Reaction mechanismNitrileLactamsProlineStereochemistrymedicine.medical_treatmentMolecular Dynamics SimulationCatalysischemistry.chemical_compoundMolecular dynamicsLeucineCatalytic DomainNitrilesMaterials ChemistrymedicineMoleculeHumansReactivity (chemistry)Protease InhibitorsBinding siteCoronavirus 3C ProteasesProteaseBinding SitesSARS-CoV-2Metals and AlloysCOVID-19General ChemistrySurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialschemistryCovalent bondCeramics and CompositesQuantum TheoryThermodynamicsChemical communications (Cambridge, England)
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New reaction of 1H-pyrazoles with selenium dioxide: one-pot synthesis of bis(1H-pyrazol-4-yl)selenides

2010

Abstract A novel reaction between 3- and 3,5-substituted pyrazoles with selenium dioxide proceeds with formation of bis(3R,5R′-1H-pyrazol-4-yl)selenides in high yield. On this basis, an efficient one-pot synthetic procedure has been developed. In the case of the unsubstituted pyrazole a selenonium compound has been obtained. The identity and structure of the isolated selenium derivatives have been confirmed by spectral methods and their molecular structures investigated by X-ray analysis.

Reaction mechanismOrganic ChemistryOne-pot synthesischemistry.chemical_elementCrystal structurePyrazoleBiochemistryChemical synthesisMedicinal chemistrychemistry.chemical_compoundNucleophilechemistryYield (chemistry)Drug DiscoveryOrganic chemistrySeleniumTetrahedron
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