Search results for "Recurrent"

showing 10 items of 256 documents

Recurrent Deep Neural Networks for Nucleosome Classification

2020

Nucleosomes are the fundamental repeating unit of chromatin. A nucleosome is an 8 histone proteins complex, in which approximately 147–150 pairs of DNA bases bind. Several biological studies have clearly stated that the regulation of cell type-specific gene activities are influenced by nucleosome positioning. Bioinformatic studies have improved those results showing proof of sequence specificity in nucleosomes’ DNA fragment. In this work, we present a recurrent neural network that uses nucleosome sequence features representation for their classification. In particular, we implement an architecture which stacks convolutional and long short-term memory layers, with the main purpose to avoid t…

0301 basic medicineSettore ING-INF/05 - Sistemi Di Elaborazione Delle InformazionibiologySettore INF/01 - InformaticaComputer scienceComputational biologyChromatin03 medical and health scienceschemistry.chemical_compound030104 developmental biologyHistoneRecurrent neural networkchemistryFragment (logic)biology.proteinNucleosomeNucleosome classification Epigenetic Deep learning networks Recurrent Neural NetworksGeneDNASequence (medicine)
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Recurrent strokes associated with uncontrollable giant cell arteritis

2016

International audience

030203 arthritis & rheumatologymedicine.medical_specialtybusiness.industry[SDV.NEU.NB]Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]/Neurobiologymedicine.disease03 medical and health sciencesGiant cell arteritis0302 clinical medicineNeurologyRecurrent stroke[ SDV.NEU.NB ] Life Sciences [q-bio]/Neurons and Cognition [q-bio.NC]/NeurobiologyStrokesmedicineNeurology (clinical)Radiologybusiness030217 neurology & neurosurgeryComputingMilieux_MISCELLANEOUSGiant cell arteritis
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Improving Speaker-Independent Lipreading with Domain-Adversarial Training

2017

We present a Lipreading system, i.e. a speech recognition system using only visual features, which uses domain-adversarial training for speaker independence. Domain-adversarial training is integrated into the optimization of a lipreader based on a stack of feedforward and LSTM (Long Short-Term Memory) recurrent neural networks, yielding an end-to-end trainable system which only requires a very small number of frames of untranscribed target data to substantially improve the recognition accuracy on the target speaker. On pairs of different source and target speakers, we achieve a relative accuracy improvement of around 40% with only 15 to 20 seconds of untranscribed target speech data. On mul…

030507 speech-language pathology & audiology03 medical and health sciencesAdversarial systemRecurrent neural networkComputer scienceSpeech recognitionFeed forwardTraining (meteorology)0305 other medical scienceAccuracy improvementIndependence (probability theory)Domain (software engineering)Interspeech 2017
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Interpretability of Recurrent Neural Networks in Remote Sensing

2020

In this work we propose the use of Long Short-Term Memory (LSTM) Recurrent Neural Networks for multivariate time series of satellite data for crop yield estimation. Recurrent nets allow exploiting the temporal dimension efficiently, but interpretability is hampered by the typically overparameterized models. The focus of the study is to understand LSTM models by looking at the hidden units distribution, the impact of increasing network complexity, and the relative importance of the input covariates. We extracted time series of three variables describing the soil-vegetation status in agroe-cosystems -soil moisture, VOD and EVI- from optical and microwave satellites, as well as available in si…

2. Zero hungerMultivariate statisticsNetwork complexity010504 meteorology & atmospheric sciencesComputer science0211 other engineering and technologies02 engineering and technology15. Life on landcomputer.software_genre01 natural sciencesRecurrent neural networkDimension (vector space)Redundancy (engineering)Relevance (information retrieval)Data miningTime seriesWater contentcomputer021101 geological & geomatics engineering0105 earth and related environmental sciencesInterpretabilityIGARSS 2020 - 2020 IEEE International Geoscience and Remote Sensing Symposium
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Integrated CGH/WES Analyses Advance Understanding of Aggressive Neuroblastoma Evolution: A Case Study

2021

Neuroblastoma (NB) is the most common extra-cranial malignancy in preschool children. To portray the genetic landscape of an overly aggressive NB leading to a rapid clinical progression of the disease, tumor DNA collected pre- and post-treatment has been analyzed. Array comparative genomic hybridization (aCGH), whole-exome sequencing (WES), and pharmacogenetics approaches, respectively, have identified relevant copy number alterations (CNAs), single nucleotide variants (SNVs), and polymorphisms (SNPs) that were then combined into an integrated analysis. Spontaneously formed 3D tumoroids obtained from the recurrent mass have also been characterized. The results prove the power of combining C…

3D tumoroids; Array CGH; Clonal evolution; Neuroblastoma; Pharmacogenetics; Recurrent tumor; Single nucleotide variants; Whole exome sequencing; Child Preschool; Disease Progression; Drug Resistance Neoplasm; Fatal Outcome; Humans; Immunophenotyping; Neuroblastoma; Polymorphism Single Nucleotide; Comparative Genomic Hybridization; Whole Exome SequencingQH301-705.5Drug Resistanceclonal evolutionCase Report3D tumoroidsSingle-nucleotide polymorphismDiseaseComputational biologyBiologyMalignancyPolymorphism Single NucleotideSomatic evolution in cancerImmunophenotypingwhole exome sequencingNeuroblastomaFatal OutcomeNeuroblastomaExome SequencingmedicineHumansarray CGHrecurrent tumorPolymorphismBiology (General)ChildPreschoolExome sequencingTumorsComparative Genomic HybridizationSingle NucleotideGeneral Medicinemedicine.diseaseSingle nucleotide variantsDrug Resistance NeoplasmPharmacogeneticsChild PreschoolDisease ProgressionFarmacogenèticaNeoplasmPharmacogeneticsComparative genomic hybridization
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EP1224 Predictors and clinical outcome of pancreatic fistula in patients receiving splenectomy for advanced or recurrent ovarian cancer: a large mult…

2019

Introduction/Background The aim of the surgical treatment of advanced ovarian cancer is to completely remove all macroscopic disease.To achieve optimal cytoreduction, the use of extensive upper abdominal surgery has become widely accepted.Although the disease doesn’t usually invade the splenic parenchyma, the capsule may commonly be infiltrated. These metastases may be difficult to be dissected from the pancreatic tail and a partial pancreatic resection en bloc with spleen may be required. The objective of this study is to evaluate predictors and clinical outcome of pancreatic fistula in patients receiving splenectomy for advanced or recurrent ovarian cancer. Methodology Data of women recei…

Abdominal painChemotherapymedicine.medical_specialtybusiness.industrymedicine.medical_treatmentSplenectomyDiseasemedicine.diseaseSurgeryPancreatic fistulaRecurrent Ovarian CancerPancreatectomyMedicinemedicine.symptombusinessOvarian cancerePoster Talks: Ovarian + Endometria
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Effectiveness and safety of lomitapide in a patient with familial chylomicronemia syndrome

2020

Background: Familial chylomicronemia syndrome (FCS) is characterized by severe fasting hypertriglyceridemia, abdominal pain, and recurrent acute pancreatitis. Available triglyceride-lowering drugs are insufficient to avoid pancreatitis. Therefore, there is a significant unmet medical need for effective triglyceride-lowering drugs for patients with FCS. Case report: We report the second case of a patient with FCS and recurrent pancreatitis treated with lomitapide. Lomitapide treatment resulted in a reduction of fasting TG levels from 2897 mg/dL (32.71 mmol/L) to an average of 954 mg/dL (10.77 mmol/L) on the 30 mg lomitapide equating to a 67% reduction from baseline. After 26 months of lomita…

Abdominal painPediatricsmedicine.medical_specialtyEndocrinology Diabetes and Metabolism030209 endocrinology & metabolismGastroenterology03 medical and health scienceschemistry.chemical_compound0302 clinical medicineEndocrinologyRecurrent pancreatitisInternal medicineFatty liverHumansMedicineProspective Studiesmedicine.diagnostic_testbusiness.industryFatty liverHypertriglyceridemiaFCSFamilial Chylomicronemiamedicine.diseaseLomitapideLomitapideAcute pancreatitisPancreatitischemistry030220 oncology & carcinogenesisLiver biopsyAcute DiseaseAcute pancreatitisPancreatitisBenzimidazolesHyperlipoproteinemia Type Ilipids (amino acids peptides and proteins)medicine.symptomCardiology and Cardiovascular MedicinebusinessFamilial chylomicronaemia syndromeAtherosclerosis
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Human papilloma virus (HPV)-associated gynecological alteration in mothers of children with recurrent respiratory papillomatosis during long-term obs…

2007

Abstract Background : Human papilloma virus (HPV) is one of the most frequently observed sexually transmitted infections. The study' purpose was to investigate the relation between a mother's gynecological history and the local status of her child with recurrent respiratory papillomatosis (RRP). Methods : Forty-two patients enrolled in a prospective multicenter study between 1983 and 1990. The study included patients with juvenile-onset and adult-onset RRP. All patients underwent surgery and treatment with α-interferon. Thirty-eight patients were followed up until 31.01.2006. Twenty-five mothers of these patients participated in a parallel prospective study of genital HPV infection. In 1989…

AdultCancer Researchmedicine.medical_specialtyAdolescentmedicine.medical_treatmentVaginal DiseasesPapillomatosisUterine Cervical DiseasesPregnancyRecurrenceRisk FactorsPrevalencemedicineHumansLongitudinal StudiesPregnancy Complications InfectiousChildProspective cohort studyReproductive HistoryAgedColposcopyGynecologyHysterectomyPapillomamedicine.diagnostic_testObstetricsbusiness.industryPapillomavirus InfectionsHPV infectionInfantMiddle AgedCondyloma AcuminatumHuman papillomavirus 6medicine.diseaseRespiratory Tract NeoplasmsKoilocyteOncologyChild PreschoolFemaleRecurrent Respiratory Papillomatosismedicine.symptombusinessCancer Detection and Prevention
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The relevance of recurrent brief depression in primary care. A report from the WHO project on Psychological Problems in General Health Care conducted…

1994

This report from the WHO project on Psychological Problems in General Health Care examines the relevance in primary care of the concept of recurrent brief depression (RBD) proposed by Jules Angst. RBD refers to brief, severe depressive episodes that recur frequently, i.e. nearly once a month over, a 1-year period, according to Angst. Using a structured interview (CIDI), RBD was assessed in patients not meeting the criteria for depressive episodes lasting at least 2 weeks, as defined in the ICD-10 (DE). A substantial proportion of primary care seekers were identified as presenting RBD without other depressive disorders, 3.7% with a formal RBD diagnosis and 2.7% with frequent but not monthly …

AdultCross-Cultural ComparisonMalemedicine.medical_specialtyBipolar DisorderPsychometricsAdolescentPsychometricsPoison controlSuicide AttemptedComorbidityWorld Health OrganizationSuicide preventionOccupational safety and healthRecurrent brief depressionRecurrenceInjury preventionmedicineHumansPharmacology (medical)PsychiatryBiological PsychiatryAgedPsychiatric Status Rating ScalesDepressive DisorderPrimary Health Carebusiness.industryIncidenceGeneral MedicineMiddle Agedmedicine.diseaseCIDIComorbidityPsychiatry and Mental healthCross-Sectional StudiesFemalebusinessEuropean archives of psychiatry and clinical neuroscience
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Increasing the probability of selecting chromosomally normal embryos by time-lapse morphokinetics analysis

2013

Objective To study the differences in the cleavage time between chromosomally normal and abnormal embryos and to elaborate an algorithm to increase the probability of noninvasively selecting chromosomally normal embryos. Design Retrospective cohort study. Setting University-affiliated infertility center. Patient(s) Preimplantation genetic screening patients (n = 125; n=77 with ET), including cases of repeated implantation failure or recurrent miscarriage. A total of 504 embryos were analyzed. Intervention(s) Embryo culture within a time-lapse system. Main Outcome Measure(s) Kinetic variables included the time to 2 (t2), 3 (t3), 4 (t4), and 5 (t5) cells as well as the length of the second (c…

AdultInfertilityBiologyLogistic regressionTime-Lapse ImagingCohort StudiesAndrologyPregnancyRecurrent miscarriagemedicineHumansEmbryo ImplantationPreimplantation DiagnosisProbabilityRetrospective StudiesChromosome AberrationsGeneticsObstetrics and GynecologyEmbryoEmbryo cultureOdds ratioEmbryo Transfermedicine.diseaseConfidence intervalEmbryo transferReproductive MedicineFemaleFertility and Sterility
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