Search results for "Regulatory sequence"

showing 10 items of 59 documents

Neuronal precursor-specific activity of a human doublecortin regulatory sequence.

2005

The doublecortin (DCX) gene encodes a 40-kDa microtubule-associated protein specifically expressed in neuronal precursors of the developing and adult CNS. Due to its specific expression pattern, attention was drawn to DCX as a marker for neuronal precursors and neurogenesis, thereby underscoring the importance of its promoter identification and promoter analysis. Here, we analysed the human DCX regulatory sequence and confined it to a 3.5-kb fragment upstream of the ATG start codon. We demonstrate by transient transfection experiments that this fragment is sufficient and specific to drive expression of reporter genes in embryonic and adult neuronal precursors. The activity of this regulator…

Doublecortin Domain ProteinsDoublecortin Protein5' Flanking RegionBlotting WesternMolecular Sequence DataRegulatory Sequences Nucleic AcidTransfectionBiochemistryHippocampusCellular and Molecular NeuroscienceMiceGene expressionAnimalsHumansCell LineageGrowth SubstancesGeneTranscription factorCells CulturedSequence DeletionRegulation of gene expressionNeuronsReporter genebiologyBase SequenceStem CellsNeurogenesisNeuropeptidesBrainSequence Analysis DNAMolecular biologyDoublecortinMice Inbred C57BLGene Expression RegulationRegulatory sequencebiology.proteinMicrotubule-Associated ProteinsJournal of neurochemistry
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Multiple copies of SUC4 regulatory regions may cause partial de-repression of invertase synthesis in Saccharomyces cerevisiae.

1992

Transformation to generate multiple copies of regulatory DNA sequences has been used to study the interactions between regulatory proteins and their target sequences, since a high copy number of these sequences may titrate trans-acting regulatory proteins. We have analyzed the synthesis of invertase in yeast strains carrying different SUC genes transformed with the multiple-copy plasmid pSH143, a derivative of pJDB207 containing the promoter and upstream regulatory sequences of SUC4. The results obtained seem to be strain dependent. Under repressing conditions a high copy number of SUC4 promoter regions may cause increased expression of the invertase genes resulting in the synthesis of exte…

ElectrophoresisGlycoside HydrolasesSaccharomyces cerevisiaeGenes FungalMolecular Sequence DataSaccharomyces cerevisiaePlasmidGene Expression Regulation FungalGeneticsPromoter Regions GeneticGeneRepetitive Sequences Nucleic AcidRegulation of gene expressionGeneticsBinding SitesbiologyBase Sequencebeta-FructofuranosidaseFungal geneticsPromoterGeneral Medicinebiology.organism_classificationInvertaseGlucoseRegulatory sequenceEnzyme RepressionPlasmidsCurrent genetics
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In silico characterization of the neural alpha tubulin gene promoter of the sea urchin embryo Paracentrotus lividus by phylogenetic footprinting

2011

During Paracentrotus lividus sea urchin embryo development one alpha and one beta tubulin genes are expressed specifically in the neural cells and they are early end output of the gene regulatory network that specifies the neural commitment. In this paper we have used a comparative genomics approach to identify con- served regulatory elements in the P. lividus neural alpha tubulin gene. To this purpose, we have first isolated a genomic clone containing the entire gene plus 4.5 Kb of 5 0 upstream sequences. Then, we have shown by gene transfer experiments that its non-coding region drives the spatio- temporal gene expression corresponding substantially to that of the endogenous gene. In addi…

Embryo NonmammalianMicroinjectionsSequence analysisGreen Fluorescent ProteinsDNA FootprintingNerve Tissue ProteinsSettore BIO/11 - Biologia MolecolarePhylogenetic footprintingParacentrotus lividusGenes ReporterTubulinGeneticsAnimalsPromoter Regions GeneticMolecular BiologyGeneDNA PrimersExpressed Sequence TagsComparative genomicsGeneticsBinding SitesbiologyGene Transfer TechniquesComputational BiologyMolecular Sequence AnnotationPromoterGenomicsGeneral MedicineSea urchin Neural development Gene expression Phylogenetic footprint Cis-regulatory analysisbiology.organism_classificationGene Expression RegulationRegulatory sequenceParacentrotusOrthologous GeneMolecular Biology Reports
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desat1 and the Evolution of Pheromonal Communication in Drosophila

2009

1749-6632 (Electronic) 0077-8923; The evolution of communication is a fundamental biological problem. The genetic control of the signal and its reception must be tightly coadapted, especially in interindividual sexual communication. However, there is very little experimental evidence for tight genetic linkage connecting the emission of a signal and its reception. In Drosophila melanogaster, desat1 is the first known gene that simultaneously affects the emission and the perception of sex pheromones. Our experiments show that both aspects of pheromonal communication (the emission and the perception of sex pheromones) depend on distinct genetic control and may result from tissue-specific expre…

Fatty Acid DesaturasesMaleEvolutionDrosophila Proteins/genetics/*physiologyPheromonesGeneral Biochemistry Genetics and Molecular BiologyHistory and Philosophy of ScienceDrosophila ProteinsAnimalsCoding regionAnimal communicationPheromones/*physiologyGenebiologyEcologyDrosophila/*physiologyGeneral Neurosciencebiology.organism_classificationBiological EvolutionAnimal CommunicationFatty Acid Desaturases/genetics/*physiologyRegulatory sequenceEvolutionary biologySex pheromonePheromoneDrosophilaFemaleDrosophila melanogasterDrosophila ProteinAnnals of the New York Academy of Sciences
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desat1: A Swiss army knife for pheromonal communication and reproduction?

2012

International audience; The desat1 gene possesses an extraordinary-maybe unique-feature in the control of sensory communication systems: it codes for the two principal and complementary aspects-the emission and the reception-of Drosophila sex pheromones. These two complex aspects depend on separate genetic control indicating that desat1 pleiotropically acts on pheromonal communication. This gene also control other characters either related to reproduction and to osmoregulation. Such a functional pleiotropy may be related to the molecular structure of desat1 gene which combines a highly conserved coding region with fast evolving regulatory regions: It produces at least five transcripts all g…

Fatty Acid DesaturasesMaleGeneticsReproductionmedia_common.quotation_subject[ SDV.AEN ] Life Sciences [q-bio]/Food and NutritionGenetic PleiotropyRegulatory Sequences Nucleic AcidBiologyAlternative SplicingDrosophila melanogasterPleiotropyRegulatory sequenceInsect ScienceSex pheromoneAnimalsDrosophila ProteinsCoding regionFemaleSex AttractantsReproductionGene[SDV.AEN]Life Sciences [q-bio]/Food and Nutritionmedia_common
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Regulatory RNAs and beyond.

2011

The dynamic regulation of biological processes by RNA has emerged as a key field in recent years, and was the topic of the 62nd Mosbacher Colloquium of the German Society for Biochemistry and Molecular Biology (GBM). The 2011 Colloquium, held in April in the romantic Neckar-river region, was also a celebration of the tenth anniversary of the RNA Biochemistry study group within the GBM, which acts as platform for RNA biologists and chemists within Germany and in other European countries.

Gene Expression ProfilingRNARNA-Binding ProteinsBiologyRNA BiochemistryBioinformaticsBiochemistrylanguage.human_languageGermanUpfrontGene Expression RegulationRegulatory sequenceGeneticslanguageHumansRNAPost-transcriptional regulationMolecular BiologyClassicsEMBO reports
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HIF-1α induces MXI1 by alternate promoter usage in human neuroblastoma cells

2009

Adaptation to low oxygen conditions is essential for maintaining homeostasis and viability in oxygen-consuming multi-cellular tissues, including solid tumors. Central in these processes are the hypoxia-inducible transcription factors, HIF-1 and HIF-2, controlling genes involved in e.g. glucose metabolism and neovascularization. Tumor hypoxia and HIF expression have also been associated with a dedifferentiated phenotype and increased aggressiveness. In this report we show that the MAX interactor-1 (MXI1) gene is directly regulated by HIF proteins in neuroblastoma and breast cancer cells. HIF-binding and transactivation were detected within MXI1 gene regulatory sequences in the vicinity of th…

Gene isoformGenes mycBreast NeoplasmsBiologyTransfectionNeuroblastomaTransactivationCell Line TumorNeuroblastomaBasic Helix-Loop-Helix Transcription FactorsmedicineHumansGenes Tumor SuppressorRNA Small InterferingPromoter Regions GeneticGeneTranscription factorOligonucleotide Array Sequence AnalysisBase SequenceTumor hypoxiaTumor Suppressor ProteinsCell BiologyHypoxia-Inducible Factor 1 alpha Subunitmedicine.diseaseCell HypoxiaUp-RegulationGene Expression Regulation NeoplasticHIF1ARegulatory sequenceCancer researchFemaleExperimental Cell Research
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The human fascin gene promoter is highly active in mature dendritic cells due to a stage-specific enhancer.

2003

Abstract Dendritic cells (DC), regarded as the most efficient APCs of the immune system, are capable of activating naive T cells. Thus, DC are primary targets in immunotherapy. However, little is known about gene regulation in DC, and for efficient transcriptional targeting of human DC, a suitable promoter is still missing. Recently, we successfully used the promoter of the murine actin-bundling protein fascin to transcriptionally target DC by DNA vaccination in mice. In this study, we report on isolation of the human fascin promoter and characterization of its regulatory elements. The actively expressed gene was distinguished from a conserved inactive genomic locus and a continuous region …

Genetic MarkersRetroelementsTATA boxImmunologyMolecular Sequence DataCAAT boxRegulatory Sequences Nucleic AcidCell LineTumor Cells CulturedImmunology and AllergyHumansAmino Acid SequenceGene SilencingEnhancerPromoter Regions GeneticGene3' Untranslated RegionsCells CulturedConserved SequenceFascinRegulation of gene expressionbiologyBase SequenceGenome HumanMicrofilament ProteinsPromoterCell DifferentiationDendritic CellsExonsMolecular biologyIntronsEnhancer Elements GeneticGene Expression RegulationRegulatory sequencebiology.proteinCarrier ProteinsPseudogenesJournal of immunology (Baltimore, Md. : 1950)
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TGF-beta1 in liver fibrosis: an inducible transgenic mouse model to study liver fibrogenesis.

1999

Transforming growth factor-beta1 (TGF-beta1) is a powerful stimulus for collagen formation in vitro. To determine the in vivo effects of TGF-beta1 on liver fibrogenesis, we generated transgenic mice overexpressing a fusion gene [C-reactive protein (CRP)/TGF-beta1] consisting of the cDNA coding for an activated form of TGF-beta1 under the control of the regulatory elements of the inducible human CRP gene promoter. Two transgenic lines were generated with liver-specific overexpression of mature TGF-beta1. After induction of the acute phase response (15 h) with lipopolysaccharide (100 microgram ip), plasma TGF-beta1 levels reached600 ng/ml in transgenic animals, which is100 times above normal …

Genetically modified mouseLipopolysaccharidesmedicine.medical_specialtyTranscription GeneticPhysiologyTransgeneRecombinant Fusion ProteinsMice TransgenicBiologyRegulatory Sequences Nucleic AcidLiver Cirrhosis ExperimentalMiceDownregulation and upregulationFibrosisIn vivoTransforming Growth Factor betaPhysiology (medical)Internal medicinemedicineAnimalsHumansRNA MessengerPromoter Regions GeneticRegulation of gene expressionHepatologyGastroenterologymedicine.diseaseMolecular biologyImmunohistochemistryEndocrinologymedicine.anatomical_structureC-Reactive ProteinGene Expression RegulationLiverHepatocyteHepatic stellate cellCollagenProcollagen
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The cis-regulatory sequences required for expression of the Drosophila melanogaster adult cuticle gene ACP65A.

2009

Post-embryonic development in insects requires successive molts. Molts are triggered by ecdysteroids, and the nature of the molt (larval, pupal or adult) is determined by juvenile hormones. The genes encoding cuticle proteins are targets of both classes of hormones, and therefore are interesting models to study hormone action at the molecular level. The Drosophila ACP65A cuticle gene is expressed exclusively during the synthesis of the adult exoskeleton, in epidermal domains synthesising flexible cuticle. We have examined the cis -regulatory sequences of ACP65A using phylogenetic comparisons and functional analysis, and find that only about 180 bp are essential, including an 81 bp intron. T…

GeneticsBase SequenceCuticlefungiMolecular Sequence DataIntronBiologyRegulatory Sequences Nucleic Acidbiology.organism_classificationDrosophila melanogasterGene Expression RegulationRegulatory sequenceInsect ScienceJuvenile hormoneGene expressionGeneticsAnimalsInsect ProteinsRegulatory Elements TranscriptionalDrosophila melanogasterMolecular BiologyGeneFunctional genomicsPhylogenyInsect molecular biology
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