Search results for "Research"

showing 10 items of 25967 documents

Clone-Dependent Expression of Esca Disease Revealed by Leaf Metabolite Analysis

2019

International audience; Grapevine trutk diseases, especially Esca, are of major concern since they gradually alter vineyards worldwide and cause heavy economic losses. The expression of Esca disease symptoms depends on several factors, including the grapevine cultivar. In this context, a possible clone-dependent expression of the Esca disease was studied. Two clones of 'Chardonnay' grown in the same plot were compared according to their developmental and physiological traits, metabolome, and foliar symptom expression. Analysis of their leaf metabolome highlighted differences related to symptom expression. Interestingly, the content of a few specific metabolites exhibited opposite variations…

0106 biological sciences0301 basic medicine[SDV]Life Sciences [q-bio]EscaClone (cell biology)Context (language use)DiseasePlant ScienceBiologylcsh:Plant culture01 natural sciences03 medical and health sciencesMetabolomics[SDV.IDA]Life Sciences [q-bio]/Food engineeringMetabolomelcsh:SB1-1110Cultivargrapevine trunk diseasesComputingMilieux_MISCELLANEOUSOriginal Research2. Zero hungerclonefood and beveragesMetabolite analysismetabolomicsVitis vinifera;grapevine trunk diseases;clone;metabolomics;Esca;3D fluorescenceHorticulture030104 developmental biologyVitis viniferaShoot3D fluorescence[SDV.IB]Life Sciences [q-bio]/Bioengineering010606 plant biology & botany
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Learned parasite avoidance is driven by host personality and resistance to infection in a fish-trematode interaction

2016

Cognitive abilities related to the assessment of risk improve survival. While earlier studies have examined the ability of animals to learn to avoid predators, learned parasite avoidance has received little interest. In a series of behavioural trials with the trematode parasite Diplostomum pseudospathaceum , we asked whether sea trout ( Salmo trutta trutta ) hosts show associative learning in the context of parasitism and if so, whether learning capacity is related to the likelihood of infection mediated through host personality and resistance. We show that animals are capable of learning to avoid visual cues associated with the presence of parasites. However, avoidance behaviour ceased af…

0106 biological sciences0301 basic medicineavoidancemedia_common.quotation_subjectParasitismZoologyBiologyparasites010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyHost-Parasite InteractionsAquatic organismsresistance03 medical and health sciencesvisual cueAnimalsParasite hostingPersonalityResearch ArticlesGeneral Environmental Sciencemedia_commonlearningBehavior AnimalGeneral Immunology and MicrobiologyResistance (ecology)Host (biology)CognitionGeneral Medicine030104 developmental biologypersonalityFish <Actinopterygii>ta1181TrematodaGeneral Agricultural and Biological SciencesSocial psychologySalmonidaeProceedings of the Royal Society B : Biological Sciences
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Seasonal genetic variation associated with population dynamics of a poecilogonous polychaete worm

2017

Poecilogonous species show variation in developmental mode, with larvae that differ both morphologically and ecologically. The spionid polychaete Pygospio elegans shows variation in developmental mode not only between populations, but also seasonally within populations. We investigated the consequences of this developmental polymorphism on the spatial and seasonal genetic structure of P. elegans at four sites in the Danish Isefjord‐Roskilde‐Fjord estuary at six time points, from March 2014 until February 2015. We found genetic differentiation between our sampling sites as well as seasonal differentiation at two of the sites. The seasonal genetic shift correlated with the appearance of new s…

0106 biological sciences0301 basic medicinechaotic genetic patchinessPopulationZoologyBiology010603 evolutionary biology01 natural sciencesPygospio eleganspoecilogonydevelopmental mode03 medical and health sciencesGenetic variationbet-hedgingeducationEcology Evolution Behavior and SystematicsOriginal ResearchNature and Landscape ConservationLarvageographyeducation.field_of_studyPolychaetegeography.geographical_feature_categoryPygospio elegansEcologyReproductive successEcologyEstuarybiology.organism_classificationgeneettinen muuntelu030104 developmental biologyGenetic structureta1181bet‐hedgingEcology and Evolution
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Alternative Splicing of the Basic Helix–Loop–Helix Transcription Factor Gene CmbHLH2 Affects Anthocyanin Biosynthesis in Ray Florets of Chrysanthemum…

2021

Chrysanthemum is an important ornamental crop worldwide. Some white-flowered chrysanthemum cultivars produce red ray florets under natural cultivation conditions, but little is known about how this occurs. We compared the expression of anthocyanin biosynthetic and transcription factor genes between white ray florets and those that turned red based on cultivation conditions to comprehend the underlying mechanism. Significant differences in the expression of CmbHLH2 were detected between the florets of different colors. CmbHLH2 generated two alternatively spliced transcripts, designated CmbHLH2Full and CmbHLH2Short. Compared with CmbHLH2Full, CmbHLH2Short encoded a truncated protein with only…

0106 biological sciences0301 basic medicinechrysanthemumMutantPlant Science01 natural sciencesanthocyaninSB1-1110alternative splicing03 medical and health scienceschemistry.chemical_compoundArabidopsisPigment accumulationOriginal Researchbasic helix–loop–helixbiologyChrysanthemum morifoliumAlternative splicingfood and beveragesPlant culturebiology.organism_classificationCell biology030104 developmental biologychemistryMBW complexAnthocyaninRNA splicingHeterologous expression010606 plant biology & botanyFrontiers in Plant Science
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Variation in gene expression within clones of the earthworm Dendrobaena octaedra

2017

Gene expression is highly plastic, which can help organisms to both acclimate and adapt to changing environments. Possible variation in gene expression among individuals with the same genotype (among clones) is not widely considered, even though it could impact the results of studies that focus on gene expression phenotypes, for example studies using clonal lines. We examined the extent of within and between clone variation in gene expression in the earthworm Dendrobaena octaedra, which reproduces through apomictic parthenogenesis. Five microsatellite markers were developed and used to confirm that offspring are genetic clones of their parent. After that, expression of 12 genes was measured…

0106 biological sciences0301 basic medicinegenotypeClone (cell biology)lcsh:Medicineearthworms01 natural sciencesMicrosatellite LociDendrobaena octaedraGenotypeGene expressiongeeniekspressioAnnelidslcsh:ScienceGeneticsMultidisciplinarykloonitPhenotypePhenotypesMicrosatelliteGene CloningResearch ArticleGenotypingBiologyResearch and Analysis Methods010603 evolutionary biologygenotyyppi03 medical and health sciencesExtraction techniquesclonesGene TypesApomixisGeneticsAnimalsOligochaetaparthenogenesisMolecular Biology TechniquesMolecular BiologyGenepartenogeneesita1184lcsh:ROrganismsBiology and Life SciencesParthenogenesisInvertebratesRNA extraction030104 developmental biologygene expressionta1181lcsh:QMicrosatellite RepeatsCloningPLoS ONE
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Evaluating responses to temperature during pre-metamorphosis and carry-over effects at post-metamorphosis in the wood tiger moth (Arctia plantaginis)

2019

Insect metamorphosis is one of the most recognized processes delimiting transitions between phenotypes. It has been traditionally postulated as an adaptive process decoupling traits between life stages, allowing evolutionary independence of pre- and post-metamorphic phenotypes. However, the degree of autonomy between these life stages varies depending on the species and has not been studied in detail over multiple traits simultaneously. Here, we reared full-sib larvae of the warningly coloured wood tiger moth ( Arctia plantaginis ) in different temperatures and examined their responses for phenotypic (melanization change, number of moults), gene expression (RNA-seq and qPCR of candidate ge…

0106 biological sciences0301 basic medicinelife-stage autonomymelanizationMothsWARNING SIGNALTrade-off01 natural sciencestäpläsiilikäsGENE-EXPRESSIONmedia_commonPOLYMORPHIC MOTHLarvamuodonvaihdosCOMPLEX LIFE-CYCLES70Metamorphosis BiologicalTemperaturewood tiger mothArticlesPhenotypeREAD ALIGNMENTPupacarry-over effectsTRADE-OFFLarva1181 Ecology evolutionary biologylämpötilaGeneral Agricultural and Biological SciencesResearch Article1001media_common.quotation_subjectZoologyLARVAL COLORBiology010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular Biology03 medical and health sciencesAnimalsMetamorphosisADAPTIVE SIGNIFICANCElife stage autonomyWingTigerEVOLUTION030104 developmental biologyCOLOR PATTERNBasal metabolic ratehyönteisettranscriptomePhilosophical Transactions of the Royal Society B: Biological Sciences
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New Approaches to Optimize Somatic Embryogenesis in Maritime Pine

2019

Maritime pine (Pinus pinaster Aiton) is a coniferous native of the Mediterranean basin. Because of its adaptability to a wide range of environmental conditions, the species have become a model for studies in coniferous forest management and functional genomics. Somatic embryogenesis (SE) has been so far, the preferred biotechnological strategy for maritime pine breeding programs initiated at the middle-end of the 20th century. To overcome the limitations of the induction and maturation phases in maritime pine SE, we analyzed the possible maternal influence on the embryogenic capability of megagametophytes from controlled crosses, as well as the effect of the temperature and water availabili…

0106 biological sciences0301 basic medicinematernal effectWOX2Somatic embryogenesisSomatic cellPlant ScienceBiologywater availabilitylcsh:Plant culture01 natural sciencesMediterranean Basin03 medical and health scienceslcsh:SB1-1110hormone contentOriginal ResearchLEC1Embryogenesisfungiembryo maturationMaternal effectfood and beveragestemperatureEmbryobiology.organism_classificationHorticulture030104 developmental biologyGerminationgene expressionPinus pinaster010606 plant biology & botanyFrontiers in Plant Science
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Evolutionary history of two cryptic species of northern African jerboas

2020

Abstract Background: Climatic variation and geologic change both play significant roles in shaping species distributions, thus affecting their evolutionary history. In Sahara-Sahel, climatic oscillations shifted the desert extent during the Pliocene-Pleistocene interval, triggering the diversification of several species. Here, we investigated how these biogeographical and ecological events have shaped patterns of genetic diversity and divergence in African Jerboas, desert specialist rodents. We focused on two sister and cryptic species, Jaculus jaculus and J. hirtipes, where we (1) evaluated their genetic differentiation, (2) reconstructed their evolutionary and demographic history; (3) tes…

0106 biological sciences0301 basic medicinereproductive isolationSpeciation01 natural sciencesGene flowSahara-SahelJaculus jaculusAfrica NorthernPhylogenysopeutumineneducation.field_of_studycryptic diversityDesertsEcologyReproductive isolationBiological EvolutionphylogeneticsaavikotPhylogeneticsPhylogeographylocal adaptationympäristönmuutoksetResearch ArticleDemographic historySpecies complexEvolutionjyrsijätGenetic SpeciationCryptic diversityLocal adaptationPopulationRodentiaBiologydesertsEnvironment010603 evolutionary biologyDNA MitochondrialAfrican jerboas03 medical and health sciencesQH359-425AnimalseducationEcology Evolution Behavior and SystematicsEcosystemLocal adaptationEcological nicheGenetic diversityfylogenetiikkaGenetic Variation15. Life on landbiology.organism_classificationaavikkojerbotdemographic historyReproductive isolation030104 developmental biologyspeciationHaplotypesEvolutionary biologyJaculuslajiutuminen
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Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors

2019

Reactive oxygen species (ROS)-dependent signaling pathways from chloroplasts and mitochondria merge at the nuclear protein RADICAL-INDUCED CELL DEATH1 (RCD1). RCD1 interacts in vivo and suppresses the activity of the transcription factors ANAC013 and ANAC017, which mediate a ROS-related retrograde signal originating from mitochondrial complex III. Inactivation of RCD1 leads to increased expression of mitochondrial dysfunction stimulon (MDS) genes regulated by ANAC013 and ANAC017. Accumulating MDS gene products, including alternative oxidases (AOXs), affect redox status of the chloroplasts, leading to changes in chloroplast ROS processing and increased protection of photosynthetic apparatus.…

0106 biological sciences0301 basic medicineretrograde signalingChloroplastsArabidopsisPlant BiologyMitochondrion01 natural sciencesElectron Transport Complex IIIGene Expression Regulation PlantArabidopsisOXIDATIVE STRESS-RESPONSETranscriptional regulationCYCLIC ELECTRON FLOWBiology (General)Nuclear proteinANAC transcription factors1183 Plant biology microbiology virologyreactive oxygen speciesbiologyChemistryRETROGRADE REGULATIONGeneral NeuroscienceQRNuclear Proteinsfood and beveragesGeneral MedicinePlants Genetically Modified:Science::Biological sciences [DRNTU]Cell biologyMitochondriaChloroplastviherhiukkasetMedicineSignal transductionmitochondrial functionsResearch ArticleSignal TransductionQH301-705.5SciencemitokondriotGenetics and Molecular BiologyGeneral Biochemistry Genetics and Molecular BiologyPROTEIN COMPLEXESSIGNALING PATHWAYS03 medical and health scienceschloroplastStress PhysiologicalALTERNATIVE OXIDASESkasvitENZYME-ACTIVITIESredox signalingTranscription factorarabidopsis RCD1General Immunology and MicrobiologybiokemiaArabidopsis Proteinsta1182Biology and Life Sciencesbiology.organism_classification030104 developmental biologyCELL-DEATHPLANT-MITOCHONDRIAA. thalianaGeneral BiochemistryRetrograde signalingGENES-ENCODING MITOCHONDRIALproteiinit010606 plant biology & botanyTranscription Factors
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Can we rely on selected genetic markers for population identification? Evidence from coastal Atlantic cod

2018

Abstract The use of genetic markers under putative selection in population studies carries the potential for erroneous identification of populations and misassignment of individuals to population of origin. Selected markers are nevertheless attractive, especially in marine organisms that are characterized by weak population structure at neutral loci. Highly fecund species may tolerate the cost of strong selective mortality during early life stages, potentially leading to a shift in offspring genotypes away from the parental proportions. In Atlantic cod, recent genetic studies have uncovered different genotype clusters apparently representing phenotypically cryptic populations that coexist i…

0106 biological sciences0301 basic medicinestatistical assignmentPopulationPopulation geneticsZoology010603 evolutionary biology01 natural sciences03 medical and health sciencesGenotypemarine fisheseducationEcology Evolution Behavior and SystematicsSelection (genetic algorithm)Original ResearchNature and Landscape Conservationeducation.field_of_studyNatural selectionEcologybiologypopulation geneticsnatural selectionPelagic zonebiology.organism_classification030104 developmental biologyGenetic markerpopulation of originAtlantic codEcology and Evolution
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