Search results for "Rhizobia"

showing 10 items of 33 documents

Rehabilitation of Mediterranean anthropogenic soils using symbiotic wild legume shrubs: Plant establishment and impact on the soil bacterial communit…

2010

Abstract Susceptibility to desertification in southern Europe is increasing and rehabilitation of desertification-threatened Mediterranean soils is a challenge due to the inhospitality of the environment. In particular, recovery of anthropogenic soils (mainly human-derived artefacts from housing construction and other inert materials or topsoil of terminal phase municipal landfills) cannot rely on spontaneous processes and low-cost/low-impact strategies are needed to prevent desertification. Mediterranean wild legume shrubs have great potential for soil recovery and conservation against desertification, thanks to drought resistance, and their symbiosis with N2-fixing rhizobia and arbuscular…

Mediterranean climateSoil bacterial communitiesSoil biologyRibosomal Intergenic Spacer analysisved/biology.organism_classification_rank.speciesSpartiumArbuscular mycorrhizal fungiSoil Sciencearbuscular mycorrhizal fungiRhizobiaBiologyrhizobiaSettore BIO/19 - Microbiologia GeneraleShrubRhizobiaAnthropogenic soil rehabilitationsoil bacterial communitieTopsoilEcologyved/biologyEcologyfungiMediterranean legume shrubbiology.organism_classificationAgricultural and Biological Sciences (miscellaneous)Soil structureAgronomyARISA
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Soil microbial diversity has an impact on plant diversity and safeguard

2015

Diversity of microbial plant symbionts has an impact on plant diversity. Examples are given for Mediterranean species.

Microbial diversitySettore AGR/05 - Assestamento Forestale E SelvicolturacollectionrhizobiaSettore BIO/19 - Microbiologia GeneraleCytisus
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Molecular typing of Agrobacterium species isolates from catheter-related bloodstream infections.

2004

AbstractAgrobacteriumisolates from intravenous catheters of three hospitalized patients were initially identified asA. tumefaciens,but inability to produce 3-ketolactose revealed that two of them wereA. vitis.However, rDNA analysis correlated all of the isolates toA. tumefaciens.Pulsed-field gel electrophoresis analysis ascertained the nosocomial transmission of the infection.

Microbiology (medical)DNA BacterialMaleRhizobiaceaeEpidemiologyAgrobacteriumBacteremiaDNA RibosomalMicrobiologyCatheterizationMolecular typingHumansTypingGel electrophoresisCross InfectionbiologyMiddle Agedbiology.organism_classificationVirologyElectrophoresis Gel Pulsed-FieldCatheterInfectious DiseasesAgrobacterium speciesEquipment ContaminationBacteriaRhizobiumInfection control and hospital epidemiology
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Isolation and Characterization of High-Efficiency Rhizobia From Western Kenya Nodulating With Common Bean.

2021

Common bean is one of the primary protein sources in third-world countries. They form nodules with nitrogen-fixing rhizobia, which have to be adapted to the local soils. Commercial rhizobial strains such as Rhizobium tropici CIAT899 are often used in agriculture. However, this strain failed to significantly increase the common bean yield in many places, including Kenya, due to the local soils’ low pH. We isolated two indigenous rhizobial strains from the nodules of common bean from two fields in Western Kenya that have never been exposed to commercial inocula. We then determined their ability to fix nitrogen in common beans, solubilize phosphorus, and produce indole acetic acid. In greenhou…

Microbiology (medical)common beanpangenomespecies delimitationnitrogen fixationsynteny blocksfood and beveragesRhizobium phaseolicomparative genomicsrhizobiaMicrobiologyQR1-502Original ResearchFrontiers in microbiology
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Phenotypic and genotypic characterization of root nodules rhizobia of Medicago littoralis Rhode and Melilotus indicus (L.) All. growing in the Oasis …

2015

Forty rhizobial strains were isolated from root nodules of Medicago littoralis Rhode and Melilotus indicus (L.) harvested from the sandy soils of Touggourt’s oases in the Oued Righ Valley, Algerian Sahara. The isolates were studied for their cultural, biochemical and symbiotic effectiveness. All of them were fast-growing bacteria; utilized a wide range of carbon sources, produced abundant extracellular polysaccharides, tolerated high concentrations of NaCl (up to 2.5 %), grew at temperatures between 28 and 45 °C and at pH values between 4.5 and 9. The isolates were sensitive to the antibiotics kanamycin, tetracycline and rifampicin but showed resistance to neomycin and erythromycin. All the…

Oasis soilRoot noduleMedicagoGenotypebiologyMelilotuKanamycinRhizobiaSettore BIO/19 - Microbiologia Generalebiology.organism_classification16S ribosomal RNARhizobiaPhenotypeAgricultural and Biological Sciences (all)Medicago littoralisMelilotus indicusBotanyMedicagomedicineMelilotusGeneral Agricultural and Biological Sciencesmedicine.drugSymbiosis
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Retama species growing in different ecological-climatic areas of northeastern Algeria have a narrow range of rhizobia that form a novel phylogenetic …

2009

International audience; Sixty-seven isolates were isolated from nodules collected on roots of Mediterranean shrubby legumes Retama raetam and Retama sphaerocarpa growing in seven ecological-climatic areas of northeastern Algeria. Genetic diversity of the Retama isolates was analyzed based on genotyping by restriction fragment length polymorphism of PCR-amplified fragments of the 16S rRNA gene, the intergenic spacer (IGS) region between the 16S and 23S rRNA genes (IGS), and the symbiotic genes nifH and nodC. Eleven haplotypes assigned to the Bradyrhizobium genus were identified. Significant biogeographical differentiation of the rhizobial populations was found, but one haplotype was predomin…

PHYLOGENYClimateRETAMAMolecular Sequence DataDIVERSITYRetamaBRADYRHYZOBIUMApplied Microbiology and BiotechnologyMicrobiologyBradyrhizobiumDNA RibosomalPlant RootsRhizobia03 medical and health sciencesRNA Ribosomal 16SBotanySYMBIOTIC GENESBradyrhizobiumCladeEcology Evolution Behavior and SystematicsBradyrhizobium elkaniiEcosystemSoil Microbiology030304 developmental biology0303 health sciencesGenetic diversitybiologyPhylogenetic treeBase SequenceGeography030306 microbiologyEcologyFabaceaebiology.organism_classificationDNA FingerprintingHousekeeping gene[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyGenes BacterialAlgeriaDNA IntergenicMULTILOCUS SEQUENCE ANALYSIS
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Glyphosate residues alter the microbiota of a perennial weed with a minimal indirect impact on plant performance

2021

Abstract Purpose In cold climates, glyphosate residues may linger in soils, with effects on plant–microbe interactions and, consequently, plant performance. Here, we explore the influence of glyphosate residues on the endophytic microbiota (bacteria and fungi) and performance of the perennial nitrogen-fixing weed Lupinus polyphyllus. Methods In a common garden, we grew plants from six populations of L. polyphyllus in glyphosate-treated or untreated control soils, with or without additional phosphorus. We sampled plant microbiota (leaves, roots, nodules) and assessed plant performance based on six traits: height, retrogression probability (i.e. shrinkage), biomass, root:shoot ratio, nodule n…

Perennial plantLupinus polyphyllusSoil SciencepitkäaikaisvaikutuksetherbisiditPlant Sciencerhizobiachemistry.chemical_compoundglyphosateherbicideglyfosaattimicrobiotaritsobitmaaperäBiomass (ecology)biologyfungifood and beveragesPlant physiologySoil classificationmaaperäeliöstöbiology.organism_classificationviljavuusmikrobistoAgronomychemistryplant traitsGlyphosateShoottorjunta-ainejäämätWeedRoundupPlant and Soil
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Dynamic of the genetic structure of bacterial and fungal communities at different developmental stages of Medicago truncatula Gaertn. cv. Jemalong li…

2006

International audience; The genetic structure of bacterial and fungal communities was characterized in the rhizosphere of Medicago truncatula Gaertn. cv. Jemalong line J5 at five developmental stages (three vegetative and two reproductive stages), and in three compartments (bulk soil, rhizosphere soil and root tissues). The genetic structure of microbial communities was determined by cultivation-independent methods using directly extracted DNA that was characterized by automated ribosomal intergenic spacer analysis (ARISA). Principal component analyses (PCA) indicate that, for all developmental stages, the genetic structure of microbial communities differed significantly by compartment, wit…

PhysiologyRibosomal Intergenic Spacer analysisBulk soilPopulation geneticsPlant ScienceBiologyPlant RootsRhizobiaSoil03 medical and health sciencesSymbiosisMycorrhizaeMedicago truncatulaBotanyMICROBIAL COMMUNITIESEcosystem030304 developmental biology2. Zero hunger0303 health sciencesRhizosphereGENETIC STRUCTUREBacteriaSYMBIOTIC ASSOCIATIONSMEDICAGO TRUNCULATAPLANT DEVELOPMENTFungiANALYSE COMPOSANTE PRINCIPALE04 agricultural and veterinary sciences15. Life on landbiology.organism_classificationMedicago truncatula[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacySTADE DEVELOPPEMENTGenetic structure040103 agronomy & agriculture0401 agriculture forestry and fisheriesRhizome
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Symbiotic N2 fixation activity in relation to C economy of Pisum sativum L. as a function of plant phenology

2003

The relationships between symbiotic nitrogen fixation (SNF) activity and C fluxes were investigated in pea plants (Pisum sativum L. cv. Baccara) using simultaneous 13 C and 15 N labelling. Analysis of the dynamics of labelled CO 2 efflux from the nodulated roots allowed the different components associated with SNF activity to be calculated, together with root and nodule synthetic and maintenance processes. The carbon costs for the synthesis of roots and nodules were similar and decreased with time. Carbon lost by turnover, associated with maintenance processes, decreased with time for nodules while it increased in the roots. Nodule turnover remained higher than root turnover until flowering…

RhizobiaceaeTime FactorsPhysiologyPlant ScienceBiologymedicine.disease_causePlant RootsRhizobium leguminosarumPisum[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/BotanicsSativumOxygen ConsumptionSymbiosisNitrogen FixationBotanymedicineSymbiosisComputingMilieux_MISCELLANEOUSRhizobium leguminosarumfungiPeasfood and beverages[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/Botanicsbiology.organism_classificationIsotopes of nitrogenKineticsNitrogen fixationSpecific activitySeasons
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Bradyrhizobium sp. nodulating the Mediterranean shrub Spanish broom (Spartium junceum L.)

2002

Aims: The molecular diversity of 25 strains of rhizobia, isolated in Sicily from root nodules of the Mediterranean shrubby legume Spanish broom (Spartium junceum L.), is presented in relation to the known rhizobial reference strains. Methods and Results: Our approach to the study of the S. junceum rhizobial diversity combined the information given by the 16S and the intergenic spacer (IGS) 16S–23S rDNA polymorphic region by obtaining them in a single polymerase chain reaction (PCR) step. The PCR fragment size of the S. junceum isolates was 2400–2500 bp and that of the reference strains varied from 2400 in Bradyrhizobium strains to 2800 in Sinorhizobium strains. Inter- and intrageneric lengt…

Root noduleMolecular Sequence DataSpartiummedicine.disease_causePlant RootsPolymerase Chain ReactionApplied Microbiology and BiotechnologyBradyrhizobiumRhizobium leguminosarumRhizobiaRNA Ribosomal 16SBotanymedicineBradyrhizobiumRibosomal DNAPhylogenyGeneticsbiologyfood and beveragesFabaceaeSequence Analysis DNAGeneral Medicinebiochemical phenomena metabolism and nutritionbiology.organism_classificationSinorhizobiumDNA IntergenicRestriction fragment length polymorphismPolymorphism Restriction Fragment LengthBiotechnology
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