Search results for "Root"

showing 10 items of 1237 documents

Functional characterization of the plastidial 3-phosphoglycerate dehydrogenase family in Arabidopsis.

2013

This work contributes to unraveling the role of the phosphorylated pathway of serine (Ser) biosynthesis in Arabidopsis (Arabidopsis thaliana) by functionally characterizing genes coding for the first enzyme of this pathway, 3-phosphoglycerate dehydrogenase (PGDH). We identified two Arabidopsis plastid-localized PGDH genes (3-PGDH and EMBRYO SAC DEVELOPMENT ARREST9 [EDA9]) with a high percentage of amino acid identity with a previously identified PGDH. All three genes displayed a different expression pattern indicating that they are not functionally redundant. pgdh and 3-pgdh mutants presented no drastic visual phenotypes, but eda9 displayed delayed embryo development, leading to aborted emb…

PhysiologyMutantMolecular Sequence DataArabidopsisPlant SciencePlant RootsGene Expression Regulation EnzymologicSerineBiochemistry and MetabolismGene Expression Regulation PlantComplementary DNAArabidopsisGeneticsSerineArabidopsis thalianaMetabolomicsAmino Acid SequencePlastidsPhosphorylationGenePhosphoglycerate DehydrogenasePhylogenyTapetumMicroscopy ConfocalbiologySequence Homology Amino AcidArabidopsis ProteinsReverse Transcriptase Polymerase Chain ReactionGenetic Complementation Testfood and beveragesPlant Components Aerialbiology.organism_classificationPlants Genetically ModifiedPhenotypeIsoenzymesBiochemistryMultigene FamilyMutationSeedsPollenPlant physiology
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Dynamic of the genetic structure of bacterial and fungal communities at different developmental stages of Medicago truncatula Gaertn. cv. Jemalong li…

2006

International audience; The genetic structure of bacterial and fungal communities was characterized in the rhizosphere of Medicago truncatula Gaertn. cv. Jemalong line J5 at five developmental stages (three vegetative and two reproductive stages), and in three compartments (bulk soil, rhizosphere soil and root tissues). The genetic structure of microbial communities was determined by cultivation-independent methods using directly extracted DNA that was characterized by automated ribosomal intergenic spacer analysis (ARISA). Principal component analyses (PCA) indicate that, for all developmental stages, the genetic structure of microbial communities differed significantly by compartment, wit…

PhysiologyRibosomal Intergenic Spacer analysisBulk soilPopulation geneticsPlant ScienceBiologyPlant RootsRhizobiaSoil03 medical and health sciencesSymbiosisMycorrhizaeMedicago truncatulaBotanyMICROBIAL COMMUNITIESEcosystem030304 developmental biology2. Zero hunger0303 health sciencesRhizosphereGENETIC STRUCTUREBacteriaSYMBIOTIC ASSOCIATIONSMEDICAGO TRUNCULATAPLANT DEVELOPMENTFungiANALYSE COMPOSANTE PRINCIPALE04 agricultural and veterinary sciences15. Life on landbiology.organism_classificationMedicago truncatula[SDV.BV.PEP]Life Sciences [q-bio]/Vegetal Biology/Phytopathology and phytopharmacySTADE DEVELOPPEMENTGenetic structure040103 agronomy & agriculture0401 agriculture forestry and fisheriesRhizome
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Detection of a plant enzyme exhibiting chlorogenate-dependant caffeoyltransferase activity in methanolic extracts of arbuscular mycorrhizal tomato ro…

2012

When Glomus intraradices-colonised tomato roots were extracted in methanol at 6 degrees C, chlorogenic acid (5-caffeoylquinic acid), naturally present in the extract, was slowly converted by transesterification into methyl caffeate. The progress of the reaction could be monitored by HPLC. The reaction only occurred when the ground roots were left in contact with the hydro-alcoholic extract and required the presence of 15-35% water in the mixture. When the roots were extracted in ethanol, chlorogenic acid was transformed to ethyl caffeate in the same conditions. The reaction was also detected in Glomus mosseae-colonised tomato root extracts. It was also detectable in non-mycorrhizal root ext…

Physiology[SDV]Life Sciences [q-bio]Arbuscular mycorrhizal fungiPlant SciencePlant RootsSubstrate SpecificityACBIOSYNTHESISchemistry.chemical_compoundTRANSFERASESolanum lycopersicumMycorrhizaeMethyl caffeateSWEET-POTATO ROOTSFood scienceEnzyme InhibitorsGlomusChromatography High Pressure LiquidPlant ProteinsbiologyTemperaturePlant physiologyfood and beveragesChlorogenic acidBiochemistryFUNGUSCOFFEE[SDE]Environmental SciencesGENESMETABOLISMCaffeoyltransferaseTomatoCaffeic AcidsChlorogenic acidTransferasesGenetics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyEnzyme AssaysEthanolEsterificationPlant ExtractsfungiEthyl caffeatePlant Components Aerialbiology.organism_classificationRootsEnzyme assayEnzyme ActivationPhenylmethylsulfonyl FluorideTransesterificationchemistrybiology.proteinMethanolCAFFEIC ACIDCATALYZED SYNTHESIS
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Deploying Genome Editing Tools for Dissecting the Biology of Nut Trees

2019

Walnuts are among the most important nut crops grown in temperate regions of the world. Commercial production in California, and increasingly worldwide, relies on only few clonally grafted scion genotypes, particularly “Chandler,” and more recently clonally propagated disease-resistant rootstocks. Diseases, nematodes, insect pests, abiotic stresses, and other nutritional and environmental factors, can reduce walnut productivity and quality, affecting grower profitability. The California Walnut Breeding Program at UC Davis has developed and released scion cultivars and rootstocks to help address some of these problems. Sequencing of the walnut genome is expected to speed walnut breeding by f…

Phytoene desaturaseCRISPR-Cas9; gene-editing; gRNA; nut crops; oxidative stress; phytoene desaturase; plastid healthBreeding programnut cropgRNAgene-editinglcsh:TX341-641HorticultureManagement Monitoring Policy and LawBiologyGenomeCropGenome editingSettore AGR/07 - Genetica Agrariaoxidative stressGlobal and Planetary Changeoxidative strelcsh:TP368-456Ecologybusiness.industryfungifood and beveragesPhenotypic traitBiotechnologySettore AGR/03 - Arboricoltura Generale E Coltivazioni Arboreelcsh:Food processing and manufacturephytoene desaturaseplastid healthCRISPR-Cas9nut cropsRootstockbusinesslcsh:Nutrition. Foods and food supplyAgronomy and Crop ScienceHickory nutFood Science
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Phytophthora Root and Collar Rot of Paulownia, a New Disease for Europe

2021

Paulownia species are fast growing trees native to China, which are being grown in managed plantings in several European countries for the production of wood and biomasses. In 2018, wilting, stunting, leaf yellowing, and collapse, as a consequence of root and crown rot, were observed in around 40% of trees of a 2-year-old planting of Paulownia elongata × P. fortunei in Calabria (Southern Italy). Two species of Phytophthora were consistently recovered from roots, basal stem bark, and rhizosphere soil of symptomatic trees and were identified as Ph. nicotianae and Ph. palmivora on the basis of both morphological characteristics and phylogenetic analysis of rDNA ITS sequences. Koch’s postulates…

Phytophthora heterosporaphPhytophthora palmivoraPaulowniacomplex mixturesPaulownia elongataRoot rotDNA sequencing; phpathogenicityDNA sequencingQK900-989Plant ecologyBiomass and timber DNA sequencing Nursery plants Pathogenicity Paulownia elongata × P. fortunei Phylogenetic analysis Phytophthora heterospora Phytophthora nicotianae Phytophthora palmivora Princess tree Tree of lifeRhizospherePaulownia elongata × P. fortuneibiologyprincess tree; tree of life; Phytophthora nicotianae; Phytophthora palmivora; Phytophthora heterospora; DNA sequencing; phylogenetic analysis; managed plantings; biomass and timber; nursery plants; pathogenicityphylogenetic analysis<i>Phytophthora palmivora</i>fungiSettore AGR/12 - Patologia Vegetalefood and beveragesForestryPhytophthora nicotianaePhytophthora palmivoraPhytophthora nicotianaebiology.organism_classification<i>Phytophthora heterospora</i>Horticulturetree of lifeCollar rot<i>Phytophthora nicotianae</i>princess treePhytophthoraprincess tree; tree of life; <i>Phytophthora nicotianae</i>; <i>Phytophthora palmivora</i>; <i>Phytophthora heterospora</i>; DNA sequencing; phylogenetic analysis; <i>Paulownia elongata</i> × <i>P. fortunei</i>; biomass and timber; nursery plants; pathogenicityForests; Volume 12; Issue 12; Pages: 1664
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Phytophthora root and crown rot of olive in southern Italy

2006

no

Phytophthora root olive
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Localized versus systemic effect of arbuscular mycorrhizal fungi on defence responses to Phytophthora infection in tomato plants

2002

Development of biological control for plant diseases is accepted as a durable and environmentally friendly alternative for agrochemicals. Arbuscular mycorrhizal fungi (AMF), which form symbiotic associations with root systems of most agricultural, horticultural and hardwood crop species, have been suggested as widespread potential bioprotective agents. In the present study the ability of two AMF (Glomus mosseae and Glomus intraradices) to induce local or systemic resistance to Phytophthora parasitica in tomato roots have been compared using a split root experimental system. Glomus mosseae was effective in reducing disease symptoms produced by P. parasitica infection, and evidence points to …

Phytophthora0106 biological sciencesGlycoside HydrolasesPhysiologyPlant SciencePlant Roots01 natural sciences[SDV.BV.BOT] Life Sciences [q-bio]/Vegetal Biology/BotanicsSolanum lycopersicumSymbiosisBotanyMycorrhizaSymbiosisPhycomycetesComputingMilieux_MISCELLANEOUSGlomusPlant Diseases2. Zero hungerbiologySuperoxide Dismutasebeta-GlucosidaseChitinasesfungiFungifood and beveragesGlucan 13-beta-Glucosidase04 agricultural and veterinary sciences[SDV.BV.BOT]Life Sciences [q-bio]/Vegetal Biology/BotanicsPhytophthora nicotianaebiology.organism_classificationImmunity InnateIsoenzymesOxidative StressChitinase040103 agronomy & agriculturebiology.protein0401 agriculture forestry and fisheriesPhytophthoraSolanaceaeSignal TransductionCONTROLE DE MALADIES010606 plant biology & botanyJournal of Experimental Botany
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Effect of rootstock on growth, yield and fruit characteristics in cv 'Bianca' pistachio (Pistacia vera L.) trees

2005

This paper, following preliminary field evaluation trials started in 1993, reports a study on the effect of eight different in vitro-propagated clonal rootstocks (P. atlantica and P. integerrima) and one seedling rootstock (P. terebinthus) on the vegetative and productive behaviour of pistachio cultivar 'Bianca'. The trees, budded in 1991, were grown using standard cultural practices for dry-land farming in a sandy clay loam soil, located inland in Sicily. On average, clones of P. integerrima (I-6 and I-2) were the most vigorous rootstocks. Clones of P. atlantica had intermediate vigour. Rootstock significantly affect yield but not fruit weight, kernel to nut ratio, splitting and blanking p…

Pistacia vera P . integerrima P . atlantica P . terebinthus rootstocks growth yield fruit characteristics leaf mineral content.Settore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeSettore AGR/13 - Chimica Agraria
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Water‐vapour retrieval from Meteosat 8/SEVIRI observations

2007

This paper aims to propose operational algorithms to retrieve the total atmospheric water vapour content (W) using the Spinning Enhanced Visible and Infrared Imager (SEVIRI) on-board Meteosat 8. MODTRAN3.5 was used to obtain simulated data in the thermal infrared channels IR10.8 and IR12.0, in order to determine the numerical values of the coefficients of the algorithms. The algorithm proposed for land pixels takes into account the SEVIRI observation geometry and the radiometric temperatures obtained in the split-window channels at two different times during a day and requires a minimum difference of 10 K in terms of temperature between the two situations. Comprehensive error analyses gave …

PixelMeteorologyADLIB-ART-2729InfraredField of viewlaw.inventionSun photometerlawRadiosondeNadirGeneral Earth and Planetary SciencesEnvironmental scienceRoot-mean-square deviationWater vaporRemote sensingInternational Journal of Remote Sensing
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Root vacuolar sequestration and suberization are prominent responses of Pistacia spp. rootstocks during salinity stress

2021

Abstract Understanding the mechanisms of stress tolerance in diverse species is needed to enhance crop performance under conditions such as high salinity. Plant roots, in particular in grafted agricultural crops, can function as a boundary against external stresses in order to maintain plant fitness. However, limited information exists for salinity stress responses of woody species and their rootstocks. Pistachio (Pistacia spp.) is a tree nut crop with relatively high salinity tolerance as well as high genetic heterogeneity. In this study, we used a microscopy‐based approach to investigate the cellular and structural responses to salinity stress in the roots of two pistachio rootstocks, Pis…

Plant ScienceBiologyBiochemistry Genetics and Molecular Biology (miscellaneous)salinity tolerancePistacia integerrimasuberizationSuberinExodermispistachio rootstockEcology Evolution Behavior and Systematicsvacuolar sequestrationEcologyPistaciaexodermisfungiBotanyXylemfood and beveragesbiology.organism_classificationendodermisSettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeSalinityHorticultureQK1-989EndodermisRootstockendodermis exodermis pistachio rootstock salinity tolerance suberization vacuolar sequestrationPlant Direct
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