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showing 10 items of 26708 documents

Simple learning rules to cope with changing environments

2008

10 pages; International audience; We consider an agent that must choose repeatedly among several actions. Each action has a certain probability of giving the agent an energy reward, and costs may be associated with switching between actions. The agent does not know which action has the highest reward probability, and the probabilities change randomly over time. We study two learning rules that have been widely used to model decision-making processes in animals-one deterministic and the other stochastic. In particular, we examine the influence of the rules' 'learning rate' on the agent's energy gain. We compare the performance of each rule with the best performance attainable when the agent …

0106 biological sciencesError-driven learningExploitComputer scienceEnergy (esotericism)Biomedical EngineeringBiophysicsBioengineeringanimal behavior010603 evolutionary biology01 natural sciencesBiochemistryMulti-armed banditModels Biologicaldecision makingBiomaterials03 medical and health sciences[ INFO.INFO-BI ] Computer Science [cs]/Bioinformatics [q-bio.QM][ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisAnimalsLearningComputer Simulation[ SDV.BIBS ] Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]multi-armed banditEcosystem030304 developmental biologySimple (philosophy)0303 health sciences[ SDE.BE ] Environmental Sciences/Biodiversity and Ecologybusiness.industrydynamic environmentslearning rulesdecision-making[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]Unlimited periodRange (mathematics)Action (philosophy)Artificial intelligence[SDE.BE]Environmental Sciences/Biodiversity and Ecology[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]businessBiotechnologyResearch Article[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Reproductive timing and individual fitness

2002

Estimation of individual fitness – i.e. description of the extent to which an individual's genes are represented in future generations – is a feature central to most evolutionary studies. Lifetime reproductive success (LRS) is a commonly used estimate of individual fitness, but because it is rate-insensitive (i.e. timing of reproductive events is not incorporated), it may give a biased estimate of fitness when reproductive timing is an important component of fitness. A review of all empirical studies which have used a recently derived, rate-sensitive estimate of individual fitness, λind revealed that λind ranks the fitness of phenotypes differently from LRS, and that this difference may lea…

0106 biological sciencesEstimation0303 health sciencesReproductive successEcologyContrast (statistics)Phenotypic traitBiology010603 evolutionary biology01 natural sciencesGenetic loadTest (assessment)03 medical and health sciencesEmpirical researchEcology Evolution Behavior and SystematicsSelection (genetic algorithm)030304 developmental biologyEcology Letters
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Modularity as a source of new morphological variation in the mandible of hybrid mice.

2012

Abstract Background Hybridization is often seen as a process dampening phenotypic differences accumulated between diverging evolutionary units. For a complex trait comprising several relatively independent modules, hybridization may however simply generate new phenotypes, by combining into a new mosaic modules inherited from each parental groups and parts intermediate with respect to the parental groups. We tested this hypothesis by studying mandible size and shape in a set of first and second generation hybrids resulting from inbred wild-derived laboratory strains documenting two subspecies of house mice, Musmusculus domesticus and Musmusculus musculus. Phenotypic variation of the mandible…

0106 biological sciencesEvolutionMandible[SDV.BID]Life Sciences [q-bio]/BiodiversityModels Biological010603 evolutionary biology01 natural sciencesHouse mouse[ SDV.BDD.MOR ] Life Sciences [q-bio]/Development Biology/MorphogenesisMandible (arthropod mouthpart)Mice03 medical and health sciencesQH359-425AnimalsBody SizeMus musculusMandible shapeTransgressive phenotypesHybridizationEcology Evolution Behavior and Systematics030304 developmental biologyHybridGenetics[ SDV.BID ] Life Sciences [q-bio]/Biodiversity0303 health sciencesModularity (networks)Geometric morphometricsbiology[SDV.BDD.MOR]Life Sciences [q-bio]/Development Biology/Morphogenesisbiology.organism_classification<it>Mus musculus</it>PhenotypeHouse mouseEvolutionary biologyTraitHybridization GeneticHouse miceTransgressiveResearch Article
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Phylogeography and Molecular Evolution of Potato virus Y

2012

Potato virus Y (PVY) is an important plant pathogen, whose host range includes economically important crops such as potato, tobacco, tomato, and pepper. PVY presents three main strains (PVYO, PVYN and PVYC) and several recombinant forms. PVY has a worldwide distribution, yet the mechanisms that promote and maintain its population structure and genetic diversity are still unclear. In this study, we used a pool of 77 complete PVY genomes from isolates collected worldwide. After removing the effect of recombination in our data set, we used Bayesian techniques to study the influence of geography and host species in both PVY population structure and dynamics. We have also performed selection and…

0106 biological sciencesEvolutionary GeneticsAmino-acid sitesSelective constraintsPotyviruslcsh:Medicine01 natural sciencesAmino-Acid SitesRecombinant strainPlant RNA virusesNegative selectionMaximum-Likelihoodlcsh:Sciencepathologie végétaleSelective ConstraintsPhylogenyGenetics0303 health sciencesCoat proteinMultidisciplinaryNatural selectionVegetal BiologybiologyEcologyGenetic-structurePotyvirusfood and beveragesEuropePhylogeneticsVenous necrosisPhylogeographyPotato virus YBiogeographyVenous NecrosisSequence AnalysisResearch ArticlePlant RNA VirusesGenome ViralMicrobiologyEvolution Molecular03 medical and health sciencesGenetic-StructureMolecular evolutionVirologyMosaic-virus[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyEvolutionary SystematicsBiology030304 developmental biologySolanum tuberosumGenetic diversityEvolutionary BiologyMosaic virusHost (biology)Maximum-likelihoodlcsh:RComputational Biologyvirus à de la pomme de terreBayes Theoremlégumebiology.organism_classificationMutational analysisMosaic-VirusMutational AnalysisEvolutionary EcologyRecombinant StrainNorth Americalcsh:QBiologie végétalePopulation Genetics010606 plant biology & botany
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Gray plumage color is more cryptic than brown in snowy landscapes in a resident color polymorphic bird

2020

Abstract Camouflage may promote fitness of given phenotypes in different environments. The tawny owl (Strix aluco) is a color polymorphic species with a gray and brown morph resident in the Western Palearctic. A strong selection pressure against the brown morph during snowy and cold winters has been documented earlier, but the selection mechanisms remain unresolved. Here, we hypothesize that selection favors the gray morph because it is better camouflaged against predators and mobbers in snowy conditions compared to the brown one. We conducted an online citizen science experiment where volunteers were asked to locate a gray or a brown tawny owl specimen from pictures taken in snowy and snow…

0106 biological sciencesFITNESSStrix alucoSpecies distributioncolor polymorphismZoologyCAMOUFLAGE010603 evolutionary biology01 natural sciencesPredationOWLS03 medical and health scienceslcsh:QH540-549.5biology.animalcamouflagemonimuotoisuusvisual predationEcology Evolution Behavior and SystematicsREDUCE030304 developmental biologyNature and Landscape ConservationOriginal ResearchsuojaväriRISK0303 health sciencesEcologybiologyselviytyminenlehtopöllöVIEWSilmastonmuutokset15. Life on landsaalistusPasserineEVOLUTIONStrix alucoclimate changeMAINTENANCEPlumageCamouflageTESTS1181 Ecology evolutionary biologyDETECTlcsh:EcologyGray (horse)survival selection
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Revision of the calcareous fen arachnofauna: habitat affinities of the fen-inhabiting spiders

2018

Calcareous fens are one of the most species-rich habitats of the temperate zone of the Northern Hemisphere. In spite of this species richness, however, calcareous fens are still rather poorly investigated. Consequently, the data of the fen-associated spider fauna are also largely lacking. The aim of the research was to study the spider fauna of the calcareous fens of Latvia and to draw conclusions about what kind of spider species and ecological groups typically inhabit calcareous fen habitats. Spiders were sampled in the summer months of 2010, 2011, and 2012 at nine different calcareous fens of the coastal lowland of Latvia. The spider collection was performed by pitfall traps and a sweep …

0106 biological sciencesFaunaBiodiversity & Conservationmire habitats010603 evolutionary biology01 natural sciencesMirelcsh:ZoologyTemperate climatespider faunalcsh:QL1-991Ecology Evolution Behavior and SystematicsSpiderCenozoicEcologyAffinitiesLatviaEurope010602 entomologyGeographyHabitatecological groupsAraneaeAnimal Science and ZoologySpecies richnessCalcareousResearch Article
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The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest

2020

Background: Although native to North America, the invasion of the aphid-like grape phylloxera Daktulosphaira vitifoliae across the globe altered the course of grape cultivation. For the past 150 years, viticulture relied on grafting-resistant North American Vitis species as rootstocks, thereby limiting genetic stocks tolerant to other stressors such as pathogens and climate change. Limited understanding of the insect genetics resulted in successive outbreaks across the globe when rootstocks failed. Here we report the 294-Mb genome of D. vitifoliae as a basic tool to understand host plant manipulation, nutritional endosymbiosis, and enhance global viticulture. Results: Using a combination of…

0106 biological sciencesFil·loxeraPhysiology[SDV]Life Sciences [q-bio]Introduced speciesPlant Science01 natural sciencesGenomeGene duplicationsStructural BiologyVitislcsh:QH301-705.5ComputingMilieux_MISCELLANEOUS2. Zero hunger0303 health scienceseducation.field_of_studyHost plant interactionsGenomeEndosymbiosisbiologyfood and beveragesBiological SciencesBiological EvolutionGeneral Agricultural and Biological SciencesRootstockInfectionDaktulosphaira vitifoliaeBiotechnologyResearch ArticlePopulation010603 evolutionary biologyGeneral Biochemistry Genetics and Molecular BiologyHemiptera03 medical and health sciencesGeneticsInsect pestsAnimalsPlagues d'insectesAdaptationBiological invasionsGenomeseducationPhylloxeraEcology Evolution Behavior and Systematics030304 developmental biologyObligateHuman GenomeViticulturaCell Biology15. Life on landbiology.organism_classificationBiologicalEffectorsClimate Actionlcsh:Biology (General)13. Climate actionEvolutionary biologyArthropod genomesPhylloxeraAdaptationIntroduced SpeciesInsectAnimal DistributionDevelopmental Biology
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Checklist of gypsophilous vascular flora in Italy

2018

Our understanding of the richness and uniqueness of the flora growing on gypsum substrates in Italy has grown significantly since the 19th century and, even today, new plant species are still being discovered. However, the plants and plant communities, growing on gypsum substrates in Italy, are still a relatively unknown subject. The main aim of this paper was to elaborate a checklist of the Italian gypsophilous flora, to increase knowledge about this peculiar flora and for which conservation efforts need to be addressed. Through a structured group communication process of experts (application of the Delphi technique), a remarkable number of experienced Italian botanists have joined togethe…

0106 biological sciencesFloraEdaphism Gypsophyte Habitats Directive Plant preservationBiodiversity & ConservationPlant SciencePoaceaePlant conservation010603 evolutionary biology01 natural sciencesFloristics & Distributionlcsh:BotanyEndemismEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUSEdaphismEcologyEdaphism Gypsophyte Habitats Directive Plant conservationSettore BIO/02 - Botanica SistematicaSouthern Europe and MediterraneanGypsophyteEuphorbiaceaePlant community15. Life on landSpecies InventoriesEcology Evolution Behavior and SystematicChecklistHabitatslcsh:QK1-989Plant preservationEuropeHabitats DirectiveGeographyTaxonAngiospermaeHabitatBiogeographyecosystems & natural spacesSettore BIO/03 - Botanica Ambientale E ApplicataBrassicaceaeSpecies richnessHabitats DirectiveCatalogues and Checklists010606 plant biology & botanyResearch ArticlePhytoKeys
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An Updated Checklist of the Sicilian Native Edible Plants: Preserving the Traditional Ecological Knowledge of Century-Old Agro-Pastoral Landscapes

2020

The traditional use of native wild food plants (NWFP) may represent a valuable supplementary food source for the present and future generations. In Sicily, the use of wild plants in the human diet dates back to very ancient times and still plays an important role in some rural communities. Moreover, in this regard, the natural and cultural inheritance of this island is wealthy and diversified for several reasons. First, Sicily hosts a rich vascular flora, with 3,000 native and 350 endemic plants. Second, due to its central position in the Mediterranean, the island has acted as a veritable melting pot for the ethnobotanical knowledge of the rural communities of the entire basin. We reviewed …

0106 biological sciencesFloraEthnobotanyPlant Sciencelcsh:Plant cultureethnobotany agro-pastoral landscapes sustainable agriculture TEK (traditional environmental knowledge) Ellenberg Indicator Values (EIV)01 natural sciences03 medical and health sciencesSustainable agricultureTEK (traditional environmental knowledge)lcsh:SB1-1110Traditional knowledgeOriginal Research030304 developmental biology2. Zero hunger0303 health sciencesAgro-pastoral landscapesAgroforestrySustainable agricultureEcotone15. Life on landChecklistlanguage.human_languageGeographyTaxonHabitatSettore BIO/03 - Botanica Ambientale E ApplicataEllenberg Indicator Values (EIV)languageSicilian010606 plant biology & botanyFrontiers in Plant Science
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Predator encounters have spatially extensive impacts on parental behaviour in a breeding bird community.

2016

Predation risk has negative indirect effects on prey fitness, partly mediated through changes in behaviour. Evidence that individuals gather social information from other members of the population suggests that events in a community may impact the behaviour of distant individuals. However, spatially wide-ranging impacts on individual behaviour caused by a predator encounter elsewhere in a community have not been documented before. We investigated the effect of a predator encounter (hawk model presented at a focal nest) on the parental behaviour of pied flycatchers ( Ficedula hypoleuca ), both at the focal nest and at nearby nests different distances from the predator encounter. We show tha…

0106 biological sciencesFood ChainPopulationspatial impactBiologyAlarm signal010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyFicedula hypoleucaPredationNesting BehaviorSongbirdsFood chainNestpredation riskAnimals0501 psychology and cognitive sciences050102 behavioral science & comparative psychologyeducationSocial informationPredatorFinlandResearch ArticlesGeneral Environmental Scienceeducation.field_of_studyGeneral Immunology and MicrobiologyEcology05 social sciencesFicedulaGeneral Medicinebiology.organism_classificationHawksPredatory Behaviorcommunityta1181CuesGeneral Agricultural and Biological SciencesProceedings. Biological sciences
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