Search results for "SEL"

showing 10 items of 14031 documents

How challenging RADseq data turned out to favor coalescent-based species tree inference. A case study in Aichryson (Crassulaceae)

2022

Analysing multiple genomic regions while incorporating detection and qualification of discordance among regions has become standard for understanding phylogenetic relationships. In plants, which usually have comparatively large genomes, this is feasible by the combination of reduced-representation library (RRL) methods and high-throughput sequencing enabling the cost effective acquisition of genomic data for thousands of loci from hundreds of samples. One popular RRL method is RADseq. A major disadvantage of established RADseq approaches is the rather short fragment and sequencing range, leading to loci of little individual phylogenetic information. This issue hampers the application of coa…

0106 biological sciences570clustering threshold selectionInferenceLocus (genetics)Computational biologyBiologyCrassulaceaedata bias010603 evolutionary biology01 natural sciencesGenomeCoalescent theoryspecies tree inference03 medical and health scienceslocus filteringGeneticscoalescent-based summary methodCluster analysisMolecular BiologyEcology Evolution Behavior and SystematicsSelection (genetic algorithm)Phylogeny030304 developmental biology0303 health sciencesGenomePhylogenetic treeHigh-Throughput Nucleotide SequencingGenomicsRADseq500 Naturwissenschaften und Mathematik::570 Biowissenschaften; Biologie::570 Biowissenschaften; BiologieTree (data structure)
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Early exposure to predation risk carries over metamorphosis in two distantly related freshwater insects

2017

1. Predation and competition play a central role in ecological communities, and it is increasingly recognised that animals use early warning cues to reduce the impact of these antagonistic interactions. 2. Strategies to avoid risk can occur during embryo development through plasticity in egg hatching time. This strategy, and its associated costs and carryover effects on adults are little understood in insects. In this study, these are explored in two distantly related freshwater insects: the damselfly Ischnura elegans and the mosquito Aedes albopictus. 3. As predicted, damselfly eggs hatched earlier in response to larval predators cues, a treatment that also affected adult size. Risk cues d…

0106 biological sciencesAedesLarvaEcologybiologyHatchingEcology010604 marine biology & hydrobiologymedia_common.quotation_subjectfungibiology.organism_classification010603 evolutionary biology01 natural sciencesCompetition (biology)PredationIschnuraDamselflyInsect Scienceembryonic structuresMetamorphosismedia_commonEcological Entomology
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Effects of temperature on persistence times of native and invasive gammarid species in the stomachs of Cottus gobio

2006

Gastric lavage was used to investigate the effects of temperature on persistence time of two amphipod species, one native Gammarus pulex and one invasive Gammarus roeseli, in the stomachs of bullhead Cottus gobio. Persistence time was strongly influenced by temperature and prey type, such that G. pulex species degraded faster than G. roeseli.

0106 biological sciencesAmphipodabiologyEcologyamphipods010604 marine biology & hydrobiologyCottus gobioAquatic ScienceCottidaebiology.organism_classification010603 evolutionary biology01 natural sciences[ SDV.EE.ECO ] Life Sciences [q-bio]/Ecology environment/Ecosystemsgastric evacuationGammarus pulex[SDV.EE.ECO]Life Sciences [q-bio]/Ecology environment/EcosystemsPulexGammarus roeseli[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisGobioComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and SystematicsGammaridaeCottus[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisJournal of Fish Biology
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Manipulating Individual Decisions and Environmental Conditions Reveal Individual Quality in Decision-Making and Non-Lethal Costs of Predation Risk

2012

Received: July 6, 2012; Accepted: November 13, 2012; Published: December 13, 2012

0106 biological sciencesAnimal breedingEcophysiology01 natural sciencesNesting BehaviorPredationSongbirdsBehavioral EcologyOrnithologyMolecular Cell BiologyCellular Stress ResponsesAnimal Managementmedia_common0303 health sciencesMultidisciplinaryEcologyAnimal BehaviorEcologyReproductionPhysiological conditionQRCommunity EcologyHabitatMedicineFemaleResearch ArticleOffspringSciencemedia_common.quotation_subjectDecision MakingEnvironmentBiology010603 evolutionary biologyBirds03 medical and health sciencesAnimalsQuality (business)BiologyCommunity StructureEcosystemSelection (genetic algorithm)030304 developmental biologyEvolutionary BiologyReproductive successHawksSpecies InteractionsEvolutionary EcologyPredatory Behaviorta1181Veterinary ScienceZoologyPLoS One
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Mussel Farming and Its Potential in the Baltic Sea

2017

Abstract The paper covers research findings on mussel farming and the analysis of current situation in mussel farming in the Baltic Sea. The mussel farming has a development potential in the Baltic Sea region. Some developers have chosen progressive activities to achieve the aim. For example, in Sweden the development of mussel farming is suggested as one of the instruments for reducing eutrophication. Several countries in the Baltic Sea region are in the beginning phase of the mariculture development. The following research methods were used in the research: studies of scientific publications, case studies and document studies on some important factors impeding the development of mussel fa…

0106 biological sciencesAquaculture potentialmussel farmingaquaculture potentialHF5001-6182business.industry010604 marine biology & hydrobiology04 agricultural and veterinary sciencesMusselResearch findings01 natural sciencesFisheryEconomics as a scienceBaltic seaAgriculturemarketing040102 fisheries0401 agriculture forestry and fisheriesEnvironmental scienceBusinessMariculturebusinessEutrophicationHB71-74Economics and Business
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Evaluation of image processing technique as an expert system in mulberry fruit grading based on ripeness level using artificial neural networks (ANNs…

2020

Abstract Image processing and artificial intelligence (AI) techniques have been applied to analyze, evaluate and classify mulberry fruit according to their ripeness (unripe, ripe, and overripe). A total of 577 mulberries were graded by an expert and the images were captured by an imaging system. Then, the geometrical properties, color, and texture characteristics of each segmented mulberry was extracted using two feature reduction methods: Correlation-based Feature Selection subset (CFS) and Consistency subset (CONS). Artificial Neural Networks (ANN) and Support Vector Machine (SVM) were applied to classify mulberry fruit. ANN classification with the CFS subset feature extraction method res…

0106 biological sciencesArtificial neural networkbusiness.industryFeature extractionPattern recognitionFeature selectionImage processing04 agricultural and veterinary sciencesHorticulturecomputer.software_genreRipeness01 natural sciencesExpert system040501 horticultureMachine vision systemSupport vector machineArtificial intelligence0405 other agricultural sciencesbusinessAgronomy and Crop Sciencecomputer010606 plant biology & botanyFood ScienceMathematicsPostharvest Biology and Technology
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Coping with Difficult Weather and Snow Conditions : Reindeer herders’ views on climate change impacts and coping strategies

2016

Winter is a critical season for reindeer herding, with the amount and quality of snow being among the most important factors determining the condition of reindeer and the annual success of the livelihood. Our first aim was to model the future (2035–2064) snow conditions in northern Finland, especially the quantities related to ground ice and/or ice layers within the snow pack, exceptionally deep snow and late snow melt. Secondly, we studied the strategies by which herders cope with the impacts of difficult weather and snow conditions on herding by interviewing 21 herders. SNOWPACK simulations indicate that snow cover formation will be delayed by an average of 19 days and snow will melt 16 d…

0106 biological sciencesAtmospheric Science010504 meteorology & atmospheric sciencesta1172educationGeography Planning and Developmentta1171Climate changeSnow modelinglcsh:QC851-999Management Monitoring Policy and Law114 Physical sciences010603 evolutionary biology01 natural sciencesReindeer herdingEnvironmental protectiontalviClimate changeHerding1172 Environmental sciences0105 earth and related environmental sciencesTraditional knowledge (TK)2. Zero hungerGlobal and Planetary ChangeLand useEcologyselviytyminenWinter15. Life on landSnowpackLivelihoodSnowreindeer herdingclimate change13. Climate actionSnowmeltSustainabilityEnvironmental sciencelcsh:Meteorology. Climatologytraditional knowledgeCopingsnow modelling
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An integrated analysis of micro- and macro-habitat features as a tool to detect weather-driven constraints: A case study with cavity nesters.

2017

The effects of climate change on animal populations may be shaped by habitat characteristics at both micro- and macro-habitat level, however, empirical studies integrating these two scales of observation are lacking. As analyses of the effects of climate change commonly rely on data from a much larger scale than the microhabitat level organisms are affected at, this mismatch risks hampering progress in developing understanding of the details of the ecological and evolutionary responses of organisms and, ultimately, effective actions to preserve their populations. Cavity nesters, often with a conservation status of concern, are an ideal model because the cavity is a microenvironment potentia…

0106 biological sciencesAtmospheric ScienceResearch FacilitiesPhysiologyOvipositionlcsh:MedicineKestrelMedicine (all); Biochemistry Genetics and Molecular Biology (all); Agricultural and Biological Sciences (all)01 natural sciencesGlobal Warming010605 ornithologyNesting BehaviorGeographical LocationsNestReproductive PhysiologyMedicine and Health SciencesNatural Selectionlcsh:ScienceAbiotic componentClimatologyeducation.field_of_studyMultidisciplinaryBiotic componentbiologyAnimal BehaviorEcologyMedicine (all)Falco naumanniEuropeHabitatItalyVertebratesClutchesResearch ArticleEvolutionary ProcessesClimate ChangePopulationAnimal Sexual BehaviorResearch and Analysis MethodsWeather Stations010603 evolutionary biologyBirdsAnimalseducationWeatherEcosystemFalconiformesAnalysis of VarianceBehaviorEvolutionary BiologyBiochemistry Genetics and Molecular Biology (all)Reproductive successlcsh:REndangered SpeciesOrganismsBiology and Life SciencesModels Theoreticalbiology.organism_classificationReproductive SuccessAgricultural and Biological Sciences (all)AmniotesPeople and PlacesLinear ModelsEarth Scienceslcsh:QZoologyPloS one
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Inbreeding reveals mode of past selection on male reproductive characters in Drosophila melanogaster

2013

Directional dominance is a prerequisite of inbreeding depression. Directionality arises when selection drives alleles that increase fitness to fixation and eliminates dominant deleterious alleles, while deleterious recessives are hidden from it and maintained at low frequencies. Traits under directional selection (i.e., fitness traits) are expected to show directional dominance and therefore an increased susceptibility to inbreeding depression. In contrast, traits under stabilizing selection or weakly linked to fitness are predicted to exhibit little-to-no inbreeding depression. Here, we quantify the extent of inbreeding depression in a range of male reproductive characters and then infer t…

0106 biological sciencesAttractivenessPopulation fragmentationOutbreeding depressionGenetic purgingBiology010603 evolutionary biology01 natural sciencessperm competition2309 Nature and Landscape Conservation03 medical and health sciences10127 Institute of Evolutionary Biology and Environmental Studiespast selectionInbreeding depressionsperm lengthStabilizing selectionSperm competitionEcology Evolution Behavior and Systematics030304 developmental biologyNature and Landscape ConservationOriginal ResearchGenetics0303 health sciencesEcologyDirectional selectionbanaanikärpänenvetovoimaisuusspermakilpailuSisäsiitos1105 Ecology Evolution Behavior and SystematicsDrosophila melanogasterta1181570 Life sciences; biology590 Animals (Zoology)siittiön pituusInbreeding2303 Ecologyinbreeding depression
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Geographical variation in egg mass and egg content in a passerine bird

2011

Reproductive, phenotypic and life-history traits in many animal and plant taxa show geographic variation, indicating spatial variation in selection regimes. Maternal deposition to avian eggs, such as hormones, antibodies and antioxidants, critically affect development of the offspring, with long-lasting effects on the phenotype and fitness. Little is however known about large-scale geographical patterns of variation in maternal deposition to eggs. We studied geographical variation in egg components of a passerine bird, the pied flycatcher (Ficedula hypoleuca), by collecting samples from 16 populations and measuring egg and yolk mass, albumen lysozyme activity, yolk immunoglobulins, yolk and…

0106 biological sciencesAvian clutch sizeAnimal sexual behaviourlcsh:MedicineBreeding01 natural sciencesOrnithologyPasseriformeslcsh:SciencePhysiological EcologyCarotenoidFLYCATCHER FICEDULA-HYPOLEUCAchemistry.chemical_classification0303 health scienceseducation.field_of_studyMultidisciplinaryEcologyGeographybiologyBARN SWALLOW EGGSEcologyPasserinePhenotype1181 Ecology evolutionary biologyembryonic structuresCOLLARED FLYCATCHERPARENTAL QUALITYResearch ArticleCLUTCH-SIZEfood.ingredientPIED FLYCATCHERPopulationZoology010603 evolutionary biologyEvolution Molecular03 medical and health sciencesQH301foodYolkbiology.animalAnimalsTIT PARUS-MAJORYOLK STEROID-LEVELSLATITUDINAL VARIATIONSelection GeneticeducationBiologyOvum030304 developmental biologyLocal adaptationQHlcsh:RFicedulaLAYING ORDERbiology.organism_classificationchemistryEvolutionary Ecologyta1181lcsh:QPopulation EcologyGenetic FitnessZoology
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