Search results for "SOI"

showing 10 items of 4823 documents

Changes in soil mineral N content and abundances of bacterial communities involved in N reactions under laboratory conditions as predictors of soil N…

2016

Proper management of soil fertility requires specific tools for predicting N availability for crops as a consequence of different fertilization strategies. More information is required, especially for organic fertilizers, depending on their mineralization rate, composition, and processing (i.e., fresh or composted manure), as well as their effects on soil properties. Laboratory soil incubations were used as a proxy for understanding plant–soil N dynamics under field conditions. Chemical and microbiological measurements as contents of mineral N, potentially mineralizable N and the abundance of key genes regulating the overall N cycle were used as predictors of mineral N availability to maize…

0301 basic medicineDenitrification030106 microbiologySoil ScienceMicrobiologyCrop03 medical and health sciencesHuman fertilizationCurve fittingamoAnirKIncubationChemistryN mineralization04 agricultural and veterinary sciencesMineralization (soil science)ManureNifHAgronomy040103 agronomy & agriculture0401 agriculture forestry and fisheriesgrowth degree dayNitrificationamoA; Curve fitting; Growth degree days; N mineralization; nifH; nirK; Soil Science; Microbiology; Agronomy and Crop ScienceGrowth degree daysSoil fertilityAgronomy and Crop ScienceSettore AGR/16 - Microbiologia Agraria
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Bacterial diversity associated with poplar trees grown on a Hg-contaminated site: Community characterization and isolation of Hg-resistant plant grow…

2018

International audience; Industrial waste dumps are rarely colonized by vegetation after they have been abandoned, indicating biological infertility. Revegetation of industrial tailings dumps is thus necessary to prevent wind erosion, metal leaching and has been shown to restore soil functions and ecosystem services. However, little is known about the microbial colonization and community structure of vegetated tailings following the application of restoration technologies. In this study, we investigated the rhizosphere and phyllosphere bacterial communities of a poplar tree plantation within a phytomanagement-based restoration program of a Hg-contaminated site. We used Illumina-based sequenc…

0301 basic medicineEnvironmental EngineeringMercury-resistant bacteriaMicroorganismPlant DevelopmentBiology03 medical and health sciencesBotanySoil PollutantsEnvironmental ChemistryRevegetationWaste Management and DisposalMicrobial inoculantSoil MicrobiologyPoplar habitatsPhytomanagement[SDV.EE]Life Sciences [q-bio]/Ecology environment2. Zero hungerTrace elementsBiomass (ecology)RhizosphereBacteriaMercury15. Life on landPlant growth-promoting bacteriaPollutionTailingsBiodegradation EnvironmentalPopulus030104 developmental biologyRhizosphere[SDE.BE]Environmental Sciences/Biodiversity and EcologyPhyllosphereSoil microbiologyEnvironmental MonitoringScience of The Total Environment
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Environmental metabarcoding reveals contrasting microbial communities at two poplar phytomanagement sites

2016

The aim of the present study is to deepen the current understanding of the microbial communities at two poplar phytomanagement sites to reveal the environmental factors that drive the abundance, diversity and composition of microbial communities. A soil analysis revealed that the two soils displayed contrasting physico-chemical characteristics, with significant lower pH and higher Cd, Zn and Mn CaCl2-extractable fractions at Leforest site, compared with Pierrelaye site. The fungal and bacterial community profiles in the poplar roots and soils were assessed through Illumina MiSeq sequencing. Diversity indices and β-diversity measures illustrated that the root microbial communities were well …

0301 basic medicineEnvironmental EngineeringSoil test030106 microbiologyBiologyActinobacteria[ SDV.EE ] Life Sciences [q-bio]/Ecology environment03 medical and health sciencesDiversity indexMycorrhizaeBotanyEnvironmental ChemistryDominance (ecology)DNA Barcoding TaxonomicWaste Management and DisposalSoil MicrobiologyComputingMilieux_MISCELLANEOUS[SDV.EE]Life Sciences [q-bio]/Ecology environment2. Zero hungerAscomycotaBacteriaEcologyMicrobiotaAlphaproteobacteriaFungi15. Life on landbiology.organism_classificationPollutionWaste Disposal Facilities030104 developmental biologyBiodegradation EnvironmentalPopulusSoil waterFranceAcidobacteria
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THE ENVIROMENTAL PROBLEMS OF THE PIANA DEL SIGNORE (GELA, SICILY) FOR A CORRECT AGRONOMIC, CULTURAL AND LANDSCAPE UPGRADING AND ENHANCEMENT OF THE AR…

2017

In Sicily it is witnessing an environmental degradation that can be conducted to the human activity and the already known process of desertification. The present study had as object the c/da Piana del Signore in plain of Gela being an area characterized by an extreme aridity and salinity. Through consultation and study of the various researches realized on the area, the various environmental and territorial characteristics outlined, highlighting the issues and possible improvements. The objective was to outline the damages caused by man proposing possible routes for a correct requalification of the area in order to enhance a landscape of great agronomic and naturalistic interest. In fact to…

0301 basic medicineGela; saline soils; aridity; pollution; upgrading04 agricultural and veterinary sciencesGelasaline soils03 medical and health sciencesGela saline soils aridity pollution upgrading030104 developmental biologylcsh:Environmental pollutionariditySettore AGR/14 - Pedologialcsh:TD172-193.5040103 agronomy & agriculturepollution0401 agriculture forestry and fisheriesupgrading
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Prevalence of intestinal parasites, with emphasis on the molecular epidemiology of Giardia duodenalis and Blastocystis sp., in the Paranaguá Bay, Bra…

2018

BACKGROUND: Intestinal protozoan parasites are major contributors to the global burden of gastrointestinal disease causing significant socioeconomic consequences. Children living in resource-poor settings with restricted access to water and sanitary services are particularly at risk of these infections. METHODS: A prospective, community-based, cross-sectional survey was conducted in Paraná (southern Brazil) between May 2015 and May 2016. A total of 766 stool samples were individually collected from volunteers (male/female ratio: 0.99; age range: 0-76 years) and used for investigating the presence of intestinal helminth and protozoan species by routine microscopic procedures including the Ka…

0301 basic medicineGiardiasisMaleVeterinary medicineCommunityBlastocystis Infectionsmedicine.disease_causeFeces0302 clinical medicineResidence CharacteristicsSurveys and QuestionnairesPrevalenceProspective StudiesIntestinal Diseases ParasiticChildNematodeeducation.field_of_studyMicroscopySoil-transmitted helminthsMiddle AgedInfectious DiseasesChild PreschoolFemaleAscaris lumbricoidesBrazilHumanAdultGenotypingAdolescent030231 tropical medicinePopulationIntestinal parasiteBiologyDNA Ribosomallcsh:Infectious and parasitic diseases03 medical and health sciencesYoung Adultparasitic diseasesmedicineHelminthHelminthsHumanslcsh:RC109-216ProtozoaeducationAgedIntestinal parasitesBlastocystisMolecular epidemiologyEndolimax nanaResearchInfant NewbornGenetic VariationInfantbiology.organism_classification030104 developmental biologyCross-Sectional StudiesBlastocystisTrichuris trichiuraParasitologyGiardia lamblia
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Exposure to environmental radionuclides alters mitochondrial DNA maintenance in a wild rodent

2020

AbstractMitochondria are sensitive to oxidative stress, including that derived from ionizing radiation. To quantify the effects of exposure to environmental radionuclides on mitochondrial DNA (mtDNA) dynamics in wildlife, bank voles (Myodes glareolus) were collected from the chernobyl exclusion zone (CEZ), where animals are exposed to elevated levels of radionuclides, and from uncontaminated areas within the CEZ and elsewhere in Ukraine. Brains of bank voles from outside the CEZ were characterized by low mtDNA copy number and low mtDNA damage; by contrast, bank voles within the CEZ had high mtDNA copy number and high mtDNA damage, consistent with putative damaging effects of elevated radiat…

0301 basic medicineIonizing radiationMitochondrial DNARodentmetsämyyrämitokondriotZoologyMyodes glareolusBiologyMitochondrionmedicine.disease_cause03 medical and health sciences0302 clinical medicinebiology.animalMyodes glareolusmedicineGeneEcology Evolution Behavior and Systematicsmitokondrio-DNACopy numberionisoiva säteilyDNAMitochondria030104 developmental biologyMitochondrial biogenesisAnimal ecology030220 oncology & carcinogenesisDNA damage[SDE.BE]Environmental Sciences/Biodiversity and EcologyOxidative stress
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Telomere Length and Frailty: The Helsinki Birth Cohort Study

2018

Objectives: Telomere length is associated with aging-related pathologies. Although the association between telomere length and frailty has been studied previously, only a few studies assessing longitudinal changes in telomere length and frailty exist. Design: Longitudinal cohort study. Setting and participants: A subpopulation of the Helsinki Birth Cohort Study consisting of 1078 older adults aged 67 to 79 years born in Helsinki, Finland, between 1934 and 1944. Measures: Relative leukocyte telomere length (LTL) was measured using quantitative real-time polymerase chain reaction at the average ages of 61 and 71 years, and at the latter the participants were assessed for frailty according to …

0301 basic medicineMaleAgingBODY-WATERbiomarkkeritvanheneminenPHENOTYPECohort StudiesRisk FactorsElectric ImpedanceMedicineLongitudinal StudiesLongitudinal cohortOXIDATIVE STRESSGeneral NursingFinlandTelomere ShorteningtelomeregerasteniaFrailtyHealth PolicyConfoundingAge FactorsRISK FACTORta3142General MedicineASSOCIATIONMiddle Aged3. Good healthCohortBody CompositionbiomarkerFemaleBirth cohortLongevityfrailtyta311103 medical and health sciencesSex FactorsINFLAMMATIONHumansELDERLY CHINESERisk factorOLDER-ADULTSAgedbusiness.industryMORTALITYBiomarkerConfidence intervalTelomere030104 developmental biologyPHYSICAL-ACTIVITYCross-Sectional StudiesSocioeconomic FactorsmarkkeritRelative risk3121 General medicine internal medicine and other clinical medicinetelomeeritGeriatrics and Gerontologybusinesshauraus-raihnausoireyhtymäDemographyJournal of the American Medical Directors Association
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Nonacidic Farnesoid X Receptor Modulators.

2017

As a cellular bile acid sensor, farnesoid X receptor (FXR) participates in regulation of bile acid, lipid and glucose homeostasis, and liver protection. Clinical results have validated FXR as therapeutic target in hepatic and metabolic diseases. To date, potent FXR agonists share a negatively ionizable function that might compromise their pharmacokinetic distribution and behavior. Here we report the development and characterization of a high-affinity FXR modulator not comprising an acidic residue.

0301 basic medicineMalemedicine.drug_classPyridinesPeroxisome proliferator-activated receptorReceptors Cytoplasmic and NuclearATP-binding cassette transporterCholesterol 7 alpha-hydroxylase01 natural sciencesRats Sprague-Dawley03 medical and health sciencesStructure-Activity RelationshipDrug StabilityDrug DiscoverymedicineGlucose homeostasisAnimalsHumansPPAR alphaReceptorCholesterol 7-alpha-HydroxylaseATP Binding Cassette Transporter Subfamily B Member 11chemistry.chemical_classificationBile acid010405 organic chemistryChemistryHEK 293 cellsImidazolesMembrane Transport ProteinsHep G2 Cells0104 chemical sciencesMolecular Docking SimulationZolpidem030104 developmental biologyHEK293 CellsBiochemistryMolecular MedicineFarnesoid X receptorATP-Binding Cassette TransportersSterol Regulatory Element Binding Protein 1HeLa CellsJournal of medicinal chemistry
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Skin and gut microbiomes of a wild mammal respond to different environmental cues

2018

Background Animal skin and gut microbiomes are important components of host fitness. However, the processes that shape the microbiomes of wildlife are poorly understood, particularly with regard to exposure to environmental contaminants. We used 16S rRNA amplicon sequencing to quantify how exposure to radionuclides impacts the skin and gut microbiota of a small mammal, the bank vole Myodes glareolus, inhabiting areas within and outside the Chernobyl Exclusion Zone (CEZ), Ukraine. Results Skin microbiomes of male bank voles were more diverse than females. However, the most pronounced differences in skin microbiomes occurred at a larger spatial scale, with higher alpha diversity in the skin m…

0301 basic medicineMalesuolistomikrobistoBeta diversityBiodiversityEnvironmental pollutionGut florasäteilybiologiaRNA Ribosomal 16SRadiation IonizingWild mammalSkin2. Zero hungerbiologyGeographyintegumentary systemympäristön saastuminenArvicolinaeionisoiva säteilyBiodiversityPollutionBank volesaastuminenIonising radiationlcsh:QR100-130FemaleMicrobiology (medical)metsämyyräympäristötekijätAnthropogenic impact030106 microbiologyZoologyMicrobiologylcsh:Microbial ecology03 medical and health sciencesMicrobial ecologyAnimalsMicrobiomeRadioisotopesBacteriaResearch15. Life on landbiology.organism_classificationbiodiversiteettiGastrointestinal Microbiome030104 developmental biologymikrobisto13. Climate actionvillieläimetSkin microbiomeAlpha diversityEnvironmental PollutionMicrobiome
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Methane oxidation in industrial biogas plants-Insights in a novel methanotrophic environment evidenced by pmoA gene analyses and stable isotope label…

2018

Abstract A broad methanotrophic community consisting of 16 different operational taxonomic units (OTUs) was detected by particulate methane monooxygenase A (pmoA) gene analyses of reactor sludge samples obtained from an industrial biogas plant. Using a cloning-sequencing approach, 75% of the OTUs were affiliated to the group of type I methanotrophs (γ-Proteobacteria) and 25% to type II methanotrophs (α-Proteobacteria) with a distinct predominance of the genus Methylobacter. By database matching, half of the total OTUs may constitute entirely novel species. For evaluation of process conditions that support growth of methanotrophic bacteria, qPCR analyses of pmoA gene copy numbers were perfor…

0301 basic medicineMethane monooxygenase030106 microbiologyBioengineeringApplied Microbiology and Biotechnology03 medical and health sciencesBioreactorsBiogasBacterial ProteinsLabellingPhylogenySoil MicrobiologybiologyBacteriaStable isotope ratioChemistryGeneral Medicinebiology.organism_classificationAnaerobic digestion030104 developmental biologyIsotopes of carbonBatch Cell Culture TechniquesEnvironmental chemistryBiofuelsIsotope LabelingAnaerobic oxidation of methanebiology.proteinOxygenasesMethaneOxidation-ReductionBacteriaBiotechnologyJournal of biotechnology
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