Search results for "SOI"

showing 10 items of 4823 documents

Characterization of Bacillus thuringiensis isolates by their insecticidal activity and their production of Cry and Vip3 proteins.

2018

WOS: 000449027600099 PubMed ID: 30383811 Bacillus thuringiensis (Bt) constitutes the active ingredient of many successful bioinsecticides used in agriculture. In the present study, the genetic diversity and toxicity of Bt isolates was investigated by characterization of native isolates originating from soil, fig leaves and fruits from a Turkish collection. Among a total of 80 Bt isolates, 18 of them were found carrying a vip3 gene (in 23% of total), which were further selected. Insecticidal activity of spore/crystal mixtures and their supernatants showed that some of the Bt isolates had significantly more toxicity against some lepidopteran species than the HD1 reference strain. Five isolate…

0301 basic medicineTurkeyProtein ExpressionBacillus Thuringiensislcsh:MedicineArtificial Gene Amplification and ExtensionBacillusProtein SequencingMothsToxicologyPathology and Laboratory MedicinePolymerase Chain ReactionDatabase and Informatics MethodsBacillus thuringiensisMedicine and Health SciencesToxinslcsh:ScienceMaterialsSoil MicrobiologyMultidisciplinaryBacterial PathogensMedical MicrobiologyPhysical SciencesPathogensSequence AnalysisResearch ArticleSequence analysisBioinformatics030106 microbiologyBacterial ToxinsMaterials ScienceToxic AgentsSequence DatabasesBiologySpodopteraHelicoverpa armigeraResearch and Analysis MethodsCrystalsMicrobiologyMicrobiology03 medical and health sciencesBacterial ProteinsGene Expression and Vector TechniquesAnimalsPest Control BiologicalMolecular Biology TechniquesSequencing TechniquesGeneMolecular BiologyMicrobial PathogensPlant DiseasesGenetic diversityMolecular Biology Assays and Analysis TechniquesToxicityBacterialcsh:RfungiOrganismsBiology and Life Sciencesbiology.organism_classificationFicusSporePlant Leaves030104 developmental biologyBiological DatabasesCry1AcSusceptibilityFruitlcsh:QPloS one
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Impact of temperature and soil type on Mycobacterium bovis survival in the environment

2017

Mycobacterium bovis, the causative agent of the bovine tuberculosis (bTB), mainly affects cattle, its natural reservoir, but also a wide range of domestic and wild mammals. Besides direct transmission via contaminated aerosols, indirect transmission of the M. bovis between wildlife and livestock might occur by inhalation or ingestion of environmental substrates contaminated through infected animal shedding. We monitored the survival of M. bovis in two soil samples chosen for their contrasted physical and-chemical properties (i.e. pH, clay content). The population of M. bovis spiked in sterile soils was enumerated by a culture-based method after 14, 30, 60, 90, 120 and 150 days of incubation…

0301 basic medicineVeterinary medicineTime FactorsPulmonology[SDV]Life Sciences [q-bio]lcsh:MedicineArtificial Gene Amplification and ExtensionSoil ChemistryPolymerase Chain ReactionSoilZoonosesMedicine and Health SciencesBovine Tuberculosislcsh:ScienceDNA extractionIncubationMammals2. Zero hungereducation.field_of_studyMycobacterium bovisMultidisciplinaryTemperatureSoil chemistryAgricultureRuminantsSoil typeActinobacteriaChemistrymycobacterium bovisInfectious DiseasesPhysical SciencesVertebratesLivestocktuberculinResearch ArticleLivestock030106 microbiologyPopulationSoil ScienceTuberculinBiology03 medical and health sciencesExtraction techniquesBovinesEnvironmental ChemistryAnimalsNatural reservoirMolecular Biology TechniqueseducationMolecular BiologytuberculineMicrobial Viability[ SDV ] Life Sciences [q-bio]Bacteriabusiness.industrylcsh:REcology and Environmental SciencesOrganismsBiology and Life Sciencesbiology.organism_classificationResearch and analysis methods13. Climate actionAmniotesRespiratory Infectionstuberculose bovinelcsh:QCattlebusiness
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Reduced prevalence of soil-transmitted helminths and high frequency of protozoan infections in the surrounding urban area of Curitiba, Paraná, Brazil

2019

Human populations living in the surrounding urban areas of large Brazilian cities have increased vulnerability to intestinal parasites. However, the epidemiological scenario of soil-transmitted helminths (STH) in Curitiba, Paraná's main city, remains largely unknown. To bridge this gap of knowledge, this study aims to determine the prevalence of intestinal parasites and to investigate potential transmission pathways of the most prevalent species detected. We conducted a cross-sectional epidemiological study between July and September 2014 among schoolchildren in urban and peri-urban (deprived) areas of the municipality of Campo do Tenente, Curitiba. A total of 549 stool samples were used fo…

0301 basic medicineVeterinary medicinemedicine.medical_specialtyEpidemiology030231 tropical medicinePopulationSchoolchildrenUrban areaArticlelcsh:Infectious and parasitic diseaseslaw.invention03 medical and health sciences0302 clinical medicineCommon specieslawProtozoan infectionparasitic diseasesEpidemiologymedicineHelminthsCuritibalcsh:RC109-216Paranáeducationgeographyeducation.field_of_studyBlastocystisgeography.geographical_feature_categorybiologySoil-transmitted helminths030108 mycology & parasitologymedicine.diseasebiology.organism_classificationInfectious DiseasesTransmission (mechanics)BlastocystisParasitologyBrazilParasite Epidemiology and Control
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High Nutrient Concentration Can Induce Virulence Factor Expression and Cause Higher Virulence in an Environmentally Transmitted Pathogen

2016

Environmentally transmitted opportunistic pathogens shuttle between two substantially different environments: outside-host and within-host habitats. These environments differ from each other especially with respect to nutrient availability. Consequently, the pathogens are required to regulate their behavior in response to environmental cues in order to survive, but how nutrients control the virulence in opportunistic pathogens is still poorly understood. In this study, we examined how nutrient level in the outside-host environment affects the gene expression of putative virulence factors of the opportunistic fish pathogen Flavobacterium columnare. The impact of environmental nutrient concen…

0301 basic medicineVirulence Factors030106 microbiologyvirulence factorsSoil ScienceVirulenceBiologyReal-Time Polymerase Chain ReactionFlavobacteriumVirulence factorflavobacterium columnareMicrobiologyFish Diseases03 medical and health sciencesMicrobial ecologynutrientscolony typeAnimalsCollagenasesPathogenGeneEcology Evolution Behavior and SystematicsChondroitin LyasesEcologyHost (biology)RT-qPCREnvironmental Exposurechondroitinasebiology.organism_classificationcollagenase030104 developmental biologyFoodOncorhynchus mykissFlavobacterium columnareWater MicrobiologyBacteriaMicrobial Ecology
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Peaks of in situ N2O emissions are influenced by N2O producing and reducing microbial communities across arable soils

2018

International audience; Introduction Agriculture is the main source of terrestrial N2O emissions, a potent greenhouse gas and the main cause of ozone depletion ((Hu et al., 2015). The reduction of N2O into N2 by microorganisms carrying the nitrous oxide reductase gene (nosZ) is the only known biological process eliminating this greenhouse gas. Recent studies showed that a previously unknown clade of N2O-reducers (nosZII) was related to the potential capacity of the soil to act as a N2O sink (see Hallin et al., 2017 and references therein). However little is known about how this group responds to different agricultural practices. Here, we investigated how N2O-producers and N2O-reducers were …

0301 basic medicine[SDE] Environmental SciencesDenitrification[SDV]Life Sciences [q-bio]Biologie du sol[SHS]Humanities and Social Sciencesnitrogen cyclingF01 - Culture des plantes[SDV.BV] Life Sciences [q-bio]/Vegetal Biologyhttp://aims.fao.org/aos/agrovoc/c_34841General Environmental Science2. Zero hungerAbiotic componentGlobal and Planetary ChangeBiotic componentdenitrificationEcologyEcologyNitrification[SDV] Life Sciences [q-bio]greenhouse gasCycle de l'azote[SDE]Environmental Sciencestillage[SHS] Humanities and Social SciencesArable landGaz à effet de serreP33 - Chimie et physique du solagroecosystemsP40 - Météorologie et climatologie030106 microbiologyhttp://aims.fao.org/aos/agrovoc/c_2793803 medical and health sciencesland-useEnvironmental Chemistryhttp://aims.fao.org/aos/agrovoc/c_12834[SDV.BV]Life Sciences [q-bio]/Vegetal Biologyhttp://aims.fao.org/aos/agrovoc/c_1666Nitrogen cycleChangement climatique[ SDV ] Life Sciences [q-bio]http://aims.fao.org/aos/agrovoc/c_7160P34 - Biologie du sol15. Life on landequipment and suppliesagroecosystems;nitrogen cycling;land-use;tillage;denitrification;nitrification;microbial diversity;greenhouse gasAgronomy13. Climate actionGreenhouse gasmicrobial diversitySoil waterEnvironmental scienceNitrification
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Inhibition of NF-κB pathway in LPS-stimulated THP-1 monocytes and COX-2 activity in vitro by berry pomace extracts from five Vaccinium species

2020

BACKGROUND: Berry processing residues called pomaces are rich in polyphenols, sugars, organic acids, and minerals. Polyphenols are reported to reduce the risk of non-communicable diseases, including cardiovascular diseases, cancer, and diabetes mellitus, owing to their anti-inflammatory activity. OBJECTIVE: We aimed to assess the anti-inflammatory properties of five Vaccinium spp. berry pomace extracts using LPS-stimulated THP-1 monocytes and a COX-2 inhibition assay. METHODS: THP-1 monocytes were pre-incubated with chemically characterized bilberry, blueberry, American cranberry, bog cranberry, and lingonberry pomace extracts following LPS stimulation. NF-κB nuclear translocation was asses…

0301 basic medicinebiologyChemistryPomaceSoil ScienceNF-κBPlant ScienceBerryHorticulturebiology.organism_classificationBiochemistryMolecular biologyIn vitro03 medical and health scienceschemistry.chemical_compound030104 developmental biology0302 clinical medicine030220 oncology & carcinogenesisTHP1 cell lineAgronomy and Crop ScienceFood ScienceVacciniumJournal of Berry Research
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Transcriptional response of Erwinia amylovora to copper shock: in vivo role of the copA gene

2017

Fire blight is a devastating plant disease caused by the bacterium Erwinia amylovora, and its control is frequently based on the use of copper-based compounds whose mechanisms of action are not well known. Consequently, in this article, we investigate the response of E. amylovora to copper shock by a whole-genome microarray approach. Transcriptional analyses showed that, in the presence of copper, 23 genes were increased in expression; these genes were classified mainly into the transport and stress functional categories. Among them, the copA gene was strongly induced and regulated in a finely tuned manner by copper. Mutation of copA, soxS, arcB, yjcE, ygcF, yhhQ, galF and EAM_3469 genes re…

0301 basic medicinechemistry.chemical_classificationReactive oxygen speciesbiology030106 microbiologyCopper toxicitySoil SciencePlant ScienceErwiniamedicine.diseasebiology.organism_classificationPlant diseaseMicrobiologySOXSComplementation03 medical and health scienceschemistrymedicineEffluxAgronomy and Crop ScienceMolecular BiologyGeneMolecular Plant Pathology
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Erwinia amylovoracatalases KatA and KatG are virulence factors and delay the starvation-induced viable but non-culturable (VBNC) response

2017

The life cycle of the plant pathogen Erwinia amylovora comprises periods inside and outside the host in which it faces oxidative stress caused by hydrogen peroxide (H2 O2 ) and other compounds. The sources of this stress are plant defences, other microorganisms and/or exposure to starvation or other environmental challenges. However, the functional roles of H2 O2 -neutralizing enzymes, such as catalases, during plant-pathogen interactions and/or under starvation conditions in phytopathogens of the family Erwiniaceae or closely related families have not yet been investigated. In this work, the contribution of E. amylovora catalases KatA and KatG to virulence and survival in non-host environm…

0301 basic medicinechemistry.chemical_classificationbiology030106 microbiologyMutantSoil ScienceVirulencePlant ScienceErwiniabiology.organism_classificationmedicine.disease_causeVirulence factorMicrobiology03 medical and health sciencesEnzymechemistryCatalasebiology.proteinmedicineAgronomy and Crop ScienceMolecular BiologyPathogenOxidative stressMolecular Plant Pathology
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Seasonal Changes in the Endosymbiotic Consortia of Aphids from the Genus <i>Cinara</i>

2016

Buchnera aphidicola is the primary endosymbiont of aphids with which it maintains an obligate mutualistic symbiotic relationship. Insects also maintain facultative symbiotic relationships with secondary symbionts, and Serratia symbiotica is the most common in aphids. The presence of both symbionts in aphids of the subfamily Lachninae has been widely studied by our group. We examined two closely related aphids, Cinara tujafilina and C. cedri in the present study. Even though both B. aphidicola strains have similar genome sizes and gene contents, the genomes of the two S. symbiotica strains were markedly different. The SCc strain has the smallest genome known for this species, while SCt posse…

0301 basic medicineeducation.field_of_studyFacultativebiologyObligatePopulationfood and beveragesSoil ScienceZoologyPlant ScienceGeneral Medicinebiochemical phenomena metabolism and nutritionbiology.organism_classificationSerratiaAcyrthosiphon pisum03 medical and health sciences030104 developmental biologySymbiosisBotanyCinaraeducationBuchneraEcology Evolution Behavior and SystematicsMicrobes and Environments
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How Hosts Taxonomy, Trophy, and Endosymbionts Shape Microbiome Diversity in Beetles.

2019

Bacterial communities play a crucial role in the biology, ecology, and evolution of multicellular organisms. In this research, the microbiome of 24 selected beetle species representing five families (Carabidae, Staphylinidae, Curculionidae, Chrysomelidae, Scarabaeidae) and three trophic guilds (carnivorous, herbivorous, detrivorous) was examined using 16S rDNA sequencing on the Illumina platform. The aim of the study was to compare diversity within and among species on various levels of organization, including evaluation of the impact of endosymbiotic bacteria. Collected data showed that beetles possess various bacterial communities and that microbiota of individuals of particular species h…

0301 basic medicinefood.ingredientcoleoptera030106 microbiologyBacterial community . Host–microbe interactionsSoil ScienceSpiroplasmaZoologymicrobial ecologyBacterial Physiological Phenomenabacterial communityhost-microbe interactionsMicrobial ecology03 medical and health sciencesfoodendosymbiontsMicrobial ecologyEndosymbiontsPhylogeneticsAnimalsMicrobiomeSymbiosisEcology Evolution Behavior and SystematicsPhylogenyScarabaeidaeEcologybiologyBacteriaMicrobiotaFeeding BehaviorHost–microbe interactionsbiology.organism_classificationColeoptera030104 developmental biologyHost Microbe InteractionsWolbachiaBacterial communityArsenophonusBuchnerahuman activitiesMicrobial ecology
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