Search results for "STOCHASTIC"

showing 10 items of 1018 documents

Accounting for preferential sampling in species distribution models

2019

D. C., A. L. Q. and F. M. would like to thank the Ministerio de Educación y Ciencia (Spain) for financial support (jointly financed by the European Regional Development Fund) via Research Grants MTM2013‐42323‐P and MTM2016‐77501‐P, and ACOMP/2015/202 from Generalitat Valenciana (Spain). Species distribution models (SDMs) are now being widely used in ecology for management and conservation purposes across terrestrial, freshwater, and marine realms. The increasing interest in SDMs has drawn the attention of ecologists to spatial models and, in particular, to geostatistical models, which are used to associate observations of species occurrence or abundance with environmental covariates in a fi…

0106 biological sciencesComputer scienceQH301 BiologySpecies distributionPoint processesStochastic partial differential equation01 natural scienceshttp://aims.fao.org/aos/agrovoc/c_6774EspèceAbundance (ecology)StatisticsPesqueríasQAOriginal Researchhttp://aims.fao.org/aos/agrovoc/c_241990303 health sciencesEcologyU10 - Informatique mathématiques et statistiquesSampling (statistics)Integrated nested Laplace approximationstochastic partial differential equationVariable (computer science)symbolsÉchantillonnageSpecies Distribution Models (SDMs)Modèle mathématiqueBayesian probabilityNDASDistribution des populations010603 evolutionary biologyQH30103 medical and health sciencessymbols.namesakeCovariateQA MathematicsSDG 14 - Life Below WaterCentro Oceanográfico de Murciaspecies distribution modelsRelative species abundanceEcology Evolution Behavior and Systematicspoint processes030304 developmental biologyNature and Landscape Conservationhttp://aims.fao.org/aos/agrovoc/c_6113http://aims.fao.org/aos/agrovoc/c_7280Markov chain Monte Carlointegrated nested Laplace approximationU30 - Méthodes de rechercheBayesian modelling
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Forecasting ocean warming impacts on seabird demography: a case study on the European storm petrel

2016

Bottom-up climatic forcing has been shown to be influential for a variety of marine taxa, but evidence on seabird populations is scarce. Seasonal variation in environmental conditions can have an indirect effect on subsequent reproduction, which, given the longevity and single-brooding of seabirds, may affect population dynamics. Our study focuses on linking the effect of oceanographic conditions (from 1991 to 2013) to the fecundity and consequently pop - ulation growth rate of the Mediterranean subspecies of the European storm petrel Hydrobates pelagicus melitensis. In this study, we examined 23 yr of > 5400 capture–mark−recaptures (CMR) and modelled the probability of skipping reproductio…

0106 biological sciencesEcologybiologyEcology010604 marine biology & hydrobiologyEffects of global warming on oceansCapture mark recaptureAquatic Sciencebiology.organism_classification010603 evolutionary biology01 natural sciencesHydrobates pelagicusOceanographyGeographySettore AGR/11 - Entomologia Generale E Applicatabiology.animalPopulation growthStorm petrelSeabirdCapture−mark−recapture · Environmental stochasticity · Hydrobates pelagicus · Population growth rate · SenescenceEcology Evolution Behavior and Systematics
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Multiple‐batch spawning as a bet‐hedging strategy in highly stochastic environments: An exploratory analysis of Atlantic cod

2021

Stochastic environments shape life‐history traits and can promote selection for risk‐spreading strategies, such as bet‐hedging. Although the strategy has often been hypothesised to exist for various species, empirical tests providing firm evidence have been rare, mainly due to the challenge in tracking fitness across generations. Here, we take a ‘proof of principle’ approach to explore whether the reproductive strategy of multiple‐batch spawning constitutes a bet‐hedging. We used Atlantic cod (Gadus morhua) as the study species and parameterised an eco‐evolutionary model, using empirical data on size‐related reproductive and survival traits. To evaluate the fitness benefits of multiple‐batc…

0106 biological sciencesEmpirical dataEvolutionReproductive strategyBiology010603 evolutionary biology01 natural sciencesrisk‐spreadingturskaEnvironmental riskGeneticsQH359-425Gadus14. Life underwaterEcology Evolution Behavior and SystematicsSelection (genetic algorithm)VDP::Landbruks- og Fiskerifag: 900::Fiskerifag: 920kuntosopeutuminenlisääntymiskäyttäytyminenEcology010604 marine biology & hydrobiologyOriginal ArticlesExploratory analysisbiology.organism_classificationlisääntyminenfitnesselinkiertomultiple‐batch spawningAtlantic codTraitOriginal Articlebet‐hedgingGeneral Agricultural and Biological SciencesAtlantic codenvironmental stochasticityympäristönmuutoksetEvolutionary Applications
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Potential of using data assimilation to support forest planning

2017

Uncertainty in forest information typically results in economic and ecological losses as a consequence of suboptimal management decisions. Several techniques have been proposed to handle such uncertainties. However, these techniques are often complex and costly. Data assimilation (DA) has recently been advocated as a tool that may reduce the uncertainty, thereby improving the quality of forest planning results. It offers an opportunity to make use of all new sources of information in a systematic way and thus provides more accurate and up-to-date information to forest planning. In this study, we refer to literature on handling uncertainties in forest planning, as well as related literature…

0106 biological sciencesForest planningGlobal and Planetary Change010504 meteorology & atmospheric sciencesEcologyOperations researchProcess (engineering)Computer sciencemedia_common.quotation_subjectForestry01 natural sciencesBayesian statisticsData assimilationStochastic optimizationQuality (business)010606 plant biology & botany0105 earth and related environmental sciencesmedia_commonCanadian Journal of Forest Research
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Diversifying selection on MHC class I in the house sparrow (Passer domesticus).

2009

10 pages; International audience; Genes of the major histocompatibility complex (MHC) are the most polymorphic loci known in vertebrates. Two main hypotheses have been put forward to explain the maintenance of MHC diversity: pathogen-mediated selection and MHC-based mate choice. Host-parasite interactions can maintain MHC diversity via frequency-dependent selection, heterozygote advantage, and diversifying selection (spatially and/or temporally heterogeneous selection). In this study, we wished to investigate the nature of selection acting on the MHC class I across spatially structured populations of house sparrows (Passer domesticus) in France. To infer the nature of the selection, we comp…

0106 biological sciencesMESH : Gene FlowMESH: Selection (Genetics)MESH: GeographyGenes MHC Class IMESH: Genetic MarkersBalancing selectionMESH : Microsatellite Repeats[ SDV.IMM.IA ] Life Sciences [q-bio]/Immunology/Adaptive immunology01 natural sciencesmicrosatellitesMESH: SparrowsMESH : Genetic MarkersMESH: AnimalsMESH: Genetic VariationMESH: Evolution MolecularGenetics0303 health scienceseducation.field_of_studyGeographybiology[SDV.BID.EVO]Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE]MESH : GeographyMESH: Genes MHC Class I[ SDE.MCG ] Environmental Sciences/Global Changes[ SDV.BID.EVO ] Life Sciences [q-bio]/Biodiversity/Populations and Evolution [q-bio.PE][SDV.IMM.IA]Life Sciences [q-bio]/Immunology/Adaptive immunologyMate choiceMESH: Stochastic ProcessesMHC class IMESH : MutationSparrowsGene FlowGenetic MarkersMESH: Mutationbalancing selection[SDE.MCG]Environmental Sciences/Global ChangesPopulationMESH : Genetic DriftMESH: Genetics Populationchemical and pharmacologic phenomenaMESH : Stochastic ProcessesMajor histocompatibility complex010603 evolutionary biologyMESH : Genes MHC Class IEvolution Molecular03 medical and health sciencesMESH : Genetic VariationMHC class IGeneticsPasser domesticusMESH : Selection (Genetics)AnimalsMESH : Evolution MolecularSelection GeneticMESH: Genetic DrifteducationAllelesMESH: Gene FlowEcology Evolution Behavior and SystematicsSelection (genetic algorithm)030304 developmental biologyLocal adaptationIsolation by distanceStochastic Processes[ SDE.BE ] Environmental Sciences/Biodiversity and Ecologyhouse sparrowMESH: AllelesGenetic DriftGenetic Variationdiversifying selectionPasser domesticus.[ SDV.GEN.GA ] Life Sciences [q-bio]/Genetics/Animal geneticsMESH : Genetics Population[SDE.ES]Environmental Sciences/Environmental and Society[SDV.GEN.GA]Life Sciences [q-bio]/Genetics/Animal geneticsGenetics PopulationEvolutionary biologyMutationbiology.proteinMESH: Microsatellite RepeatsMESH : AnimalsMESH : Sparrows[SDE.BE]Environmental Sciences/Biodiversity and EcologyMESH : Alleles[ SDE.ES ] Environmental Sciences/Environmental and SocietyMicrosatellite Repeats
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Community size can affect the signals of ecological drift and niche selection on biodiversity

2020

Made available in DSpace on 2020-12-12T01:24:05Z (GMT). No. of bitstreams: 0 Previous issue date: 2020-06-01 Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES) Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) Academy of Finland Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) Ecological drift can override the effects of deterministic niche selection on small populations and drive the assembly of some ecological communities. We tested this hypothesis with a unique data set sampled identically in 200 streams in two regions (tropical Brazil and boreal Finland) that differ in macroinvertebrate community size by fivefold. Null models allowed us t…

0106 biological sciencesMETACOMMUNITIESNichenull modelsBeta diversityBiodiversitydispersal metacommunities010603 evolutionary biology01 natural sciencesCOLONIZATIONDISPERSALCONNECTIVITYAbundance (ecology)TROPICAL STREAMbeta-diversity deviation14. Life underwaterdispersalDISTURBANCEBETA-DIVERSITYRelative species abundanceEcosystemFinlandEcology Evolution Behavior and SystematicsRESTORATIONdemographic stochasticityβ-diversity deviationvesieläimistöEcology010604 marine biology & hydrobiologySmall population sizeBiodiversitybeta diversity deviation15. Life on landBiotaluonnon monimuotoisuusbiodiversiteettiGeographyHabitat destruction13. Climate action1181 Ecology evolutionary biologySIMILARITYPATTERNShyönteisetcommunity assemblySpecies richnessaquatic insectsmetacommunitiesBrazil
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Cyclical and stochastic thermal variability affects survival and growth in brook trout

2019

Directional changes in temperature have well-documented effects on ectotherms, yet few studies have explored how increased thermal variability (a concomitant of climate change) might affect individual fitness. Using a common-garden experimental protocol, we investigated how bidirectional temperature change can affect survival and growth of brook trout (Salvelinus fontinalis) and whether the survival and growth responses differ between two populations, using four thermal-variability treatments (mean: 10 °C; range: 7–13 °C): (i) constancy; (ii) cyclical fluctuations every two days; (iii) low stochasticity (random changes every 2 days); (iv) high stochasticity (random changes daily). Recently …

0106 biological sciencesMalePhysiologyRange (biology)Newfoundland and LabradorTrout030310 physiologyPopulationClimate changeContext (language use)Kaplan-Meier Estimate010603 evolutionary biology01 natural sciencesBiochemistry03 medical and health sciencesAnimal sciencepopulaatiotconstancyAnimalsvaihtelueducationSalvelinus0303 health scienceseducation.field_of_studystochasticityStochastic Processesbiologyfluctuationcommon-gardenpuronieriäTemperaturetemperaturebiology.organism_classificationfitnessTroutFontinalis13. Climate actionEctothermlämpötilaFemaleGeneral Agricultural and Biological SciencesympäristönmuutoksetDevelopmental BiologyJournal of Thermal Biology
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Community size affects the signals of ecological drift and niche selection on biodiversity

2019

AbstractEcological drift can override the effects of deterministic niche selection on small populations and drive the assembly of small communities. We tested the hypothesis that smaller local communities are more dissimilar among each other because of ecological drift than larger communities, which are mainly structured by niche selection. We used a unique, comprehensive dataset on insect communities sampled identically in a total of 200 streams in climatically different regions (Brazil and Finland) that differ in community size by fivefold. Null models allowed us to estimate the magnitude to which beta diversity deviates from the expectation under a random assembly process while taking di…

0106 biological sciencesMetacommunityEcology010604 marine biology & hydrobiologynull modelsNicheCommunity structureBeta diversitySmall population sizebeta diversity deviation15. Life on land010603 evolutionary biology01 natural sciencesGeographyHabitat destruction13. Climate actioncommunity assemblySpecies richnessaquatic insectsdispersalmetacommunitiesRelative species abundancedemographic stochasticity
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The role of noise on the steady state distributions of phytoplankton populations

2016

The spatio-temporal behaviour of total chlorophyll concentration is investigated in the middle of the Tyrrhenian Sea by using a stochastic approach. The study is based on a reaction-diffusion-taxis model, which is used to analyse the dynamics of five phytoplankton groups, responsible for about 80% of the total chlorophyll a inside the euphotic zone of the water column. The analysis is performed by considering: (i) the intraspecific competition of the phytoplanktonic groups for limiting factors, i.e. light intensity and nutrient concentration, (ii) the seasonal changes of environmental variables, and (iii) the random fluctuations of the components of the velocity field and temperature. Speci…

0106 biological sciencesStatistics and ProbabilityPhysicsSteady state (electronics)010504 meteorology & atmospheric sciences010604 marine biology & hydrobiologyturbulenceHydrodynamic fluctuationstochastic processes (theory)Statistical and Nonlinear Physics01 natural sciencesSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)NoisePhytoplanktonHydrodynamic fluctuations; stochastic particle dynamics (theory); stochastic processes (theory); turbulence; Statistical and Nonlinear Physics; Statistics and Probability; Statistics Probability and Uncertaintystochastic particle dynamics (theory)Statistical physicsStatistics Probability and UncertaintyStatistical and Nonlinear Physic0105 earth and related environmental sciencesJournal of Statistical Mechanics: Theory and Experiment
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The irreducible uncertainty of the demography–environment interaction in ecology

2002

The interpretation of ecological data has been greatly improved by bridging the gap between ecological and statistical models. The major challenge is to separate competing hypotheses concerning demography, or other ecological relationships, and environmental variability (noise). In this paper we demonstrate that this may be an arduous, if not impossible, task. It is the lack of adequate ecological theory, rather than statistical sophistication, which leads to this problem. A reconstruction of underlying ecological processes can only be done if we are certain of either the demographic or the noise model, which is something that can only be achieved by an improved theory of stochastic ecologi…

0106 biological sciencesTime Factorsmedia_common.quotation_subjectPopulation DynamicsBiologyEcological systems theoryModels Biological010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyEcological relationshipEconometricsAnimalsNatural ecosystemEnvironmental noiseSophisticationEcosystemGeneral Environmental Sciencemedia_commonStochastic ProcessesModels StatisticalGeneral Immunology and MicrobiologyEcologyStochastic process010604 marine biology & hydrobiologySystem identificationStatistical modelGeneral MedicineBiological Sciences13. Climate actionGeneral Agricultural and Biological SciencesResearch ArticleDemographyProceedings of the Royal Society of London. Series B: Biological Sciences
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