Search results for "SUBSTITUTION"

showing 6 items of 536 documents

Experimental Evolution Reveals a Genetic Basis for Membrane-Associated Virus Release

2021

Many animal viruses replicate and are released from cells in close association to membranes. However, whether this is a passive process or is controlled by the virus remains poorly understood. Importantly, the genetic basis and evolvability of membrane-associated viral shedding have not been investigated. To address this, we performed a directed evolution experiment using coxsackievirus B3, a model enterovirus, in which we repeatedly selected the free-virion or the fast-sedimenting membrane-associated viral subpopulations. The virus responded to this selection regime by reproducibly fixing a series of mutations that altered the extent of membrane-associated viral shedding, as revealed by fu…

ultra-deep sequencingUltra-deep sequencingvirusesMutagenesis (molecular biology technique)Viral transmissionBiologyAcademicSubjects/SCI01180Virus03 medical and health sciencesGeneticsViral sheddingdirected evolutionMolecular BiologyEcology Evolution Behavior and SystematicsDiscoveriesEnterovirus030304 developmental biology0303 health sciencesExperimental evolution030306 microbiologyenterovirusviral transmissionAcademicSubjects/SCI01130Directed evolutionVirologyvirus–membrane interactionsBiological EvolutionVirus ReleaseVirus–membrane interactions3. Good healthEnterovirus B HumanVirus SheddingEvolvabilityCapsidAmino Acid SubstitutionDirected evolutionCapsid ProteinsGenetic FitnessMolecular Biology and Evolution
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Equilibres divariants entre la vapeur d'eau et les hydrates solides : Caractérisation de la nature de la solution solide, limites du domaine de divar…

1972

National audience; Nous avons récemment proposé (1, 2) deux modèles thermodynamiques pour les équilibres divariants entre la vapeur d'eau et les hydrates salins solides. Le premier postule l'existence d'une solution solide d'insertion d'eau dans le sel, le second postule l'existence d'une solution solide de substitution entre deux hydrates du sel. Le but de ce travail est d'établir un nouveau critère permettant de distinguer les deux modèles à partir de l'expérience et de délimiter le domaine divariant dans chacun des deux cas. Nous supposerons, sauf mention contraire, que la solution d'insertion obéit à la loi de Henry par rapport à l'eau et que la solution de substitution est idéale. Nous…

vapeur d'eausolution solide d'insertion[SPI.GPROC] Engineering Sciences [physics]/Chemical and Process Engineeringsolution solide de substitution[ SPI.GPROC ] Engineering Sciences [physics]/Chemical and Process Engineering[SPI.GPROC]Engineering Sciences [physics]/Chemical and Process Engineeringsolidesloi de HenryEquilibres divariantshydrates
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Lexical Substitution and Paraphasia in Advanced Dementia of the Alzheimer Type

2017

Abstract The paper presents the case study of lexical selection in Alzheimer-type dementia. Lexical substitutions in poem recitation and conversations of a Russian speaker, who suffered Alzheimer-type dementia, were analyzed on the background of the lexical retrieval and slip-of-the-tongue phenomena. The classification of the substitutions is worked out on the basis of the links between a target word and its substitutions. The current context plays an essential role as natural priming for a substitution in a poem recitation. Some words have predisposition to be lost; the units belong to the figurative language or to the category of infrequent lexemes. In conversation, the patient masked fai…

verbal associations05 social sciencesSubstitution (logic)lexical substitutionOral communication. Speech050105 experimental psychologyParaphasiaBF1-99003 medical and health sciences0302 clinical medicineAdvanced dementiaP95-95.6medicinealzheimer diseaseslips of the tonguePsychology0501 psychology and cognitive sciencesmedicine.symptomPsychology030217 neurology & neurosurgeryCognitive psychologydementiaPsychology of Language and Communication
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Modulation of Hepatitis C Virus NS5A Hyperphosphorylation by Nonstructural Proteins NS3, NS4A, and NS4B

1999

NS5A of the hepatitis C virus (HCV) is a highly phosphorylated protein involved in resistance against interferon and required most likely for replication of the viral genome. Phosphorylation of this protein is mediated by a cellular kinase(s) generating multiple proteins with different electrophoretic mobilities. In the case of the genotype 1b isolate HCV-J, in addition to the basal phosphorylated NS5A (designated pp56), a hyperphosphorylated form (pp58) was found on coexpression of NS4A (T. Kaneko, Y. Tanji, S. Satoh, M. Hijikata, S. Asabe, K. Kimura, and K. Shimotohno, Biochem. Biophys. Res. Commun. 205:320‐326, 1994). Using a comparative analysis of two full-length genomes of genotype 1b…

virusesHepatitis C virusHepacivirusMolecular Sequence DataImmunologyGene ExpressionReplicationHyperphosphorylationGenome ViralHepacivirusViral Nonstructural Proteinsmedicine.disease_causeMicrobiologyCell LineInterferonCricetinaeVirologymedicineAnimalsHumansPhosphorylationNS5ANS3Base SequencebiologyPestivirusvirus diseasesRNAbiochemical phenomena metabolism and nutritionbiology.organism_classificationVirologyMolecular biologydigestive system diseasesAmino Acid SubstitutionInsect ScienceDNA Viralmedicine.drugJournal of Virology
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Viral and cellular determinants of hepatitis C virus RNA replication in cell culture.

2003

Studies on the replication of hepatitis C virus (HCV) have been facilitated by the development of selectable subgenomic replicons replicating in the human hepatoma cell line Huh-7 at a surprisingly high level. Analysis of the replicon population in selected cells revealed the occurrence of cell culture-adaptive mutations that enhance RNA replication substantially. To gain a better understanding of HCV cell culture adaptation, we characterized conserved mutations identified by sequence analysis of 26 independent replicon cell clones for their effect on RNA replication. Mutations enhancing replication were found in nearly every nonstructural (NS) protein, and they could be subdivided into at …

virusesImmunologyCell Culture TechniquesReplicationRNA-dependent RNA polymeraseEukaryotic DNA replicationHepacivirusViral Nonstructural ProteinsBiologyVirus ReplicationOrigin of replicationMicrobiologyReplication factor CControl of chromosome duplicationVirologyTumor Cells Cultured[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyHumansRepliconVirologyAmino Acid SubstitutionViral replicationInsect ScienceRNA ViralOrigin recognition complexRepliconRibosomes
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Biochemical properties of hepatitis C virus NS5B RNA-dependent RNA polymerase and identification of amino acid sequence motifs essential for enzymati…

1997

The NS5B protein of the hepatitis C virus (HCV) is an RNA-dependent RNA polymerase (RdRp) (S.-E. Behrens, L. Tomei, and R. De Francesco, EMBO J. 15:12-22, 1996) that is assumed to be required for replication of the viral genome. To further study the biochemical and structural properties of this enzyme, an NS5B-hexahistidine fusion protein was expressed with recombinant baculoviruses in insect cells and purified to near homogeneity. The enzyme was found to have a primer-dependent RdRp activity that was able to copy a complete in vitro-transcribed HCV genome in the absence of additional viral or cellular factors. Filter binding assays and competition experiments showed that the purified enzym…

virusesImmunologyMolecular Sequence DataRNA-dependent RNA polymeraseSequence alignmentRNA-binding proteinHepacivirusViral Nonstructural ProteinsMicrobiologychemistry.chemical_compoundStructure-Activity RelationshipVirologyRNA polymeraseNS5BPeptide sequencePolymerasebiologyBase SequenceSequence Homology Amino AcidRNARNA-Binding ProteinsTemplates GeneticRNA-Dependent RNA PolymeraseMolecular biologyRecombinant ProteinschemistryAmino Acid SubstitutionInsect Sciencebiology.proteinRNA ViralSequence AlignmentResearch Article
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