Search results for "Salmo"

Comparison of Four Commercial DNA Extraction Kits for PCR Detection of Listeria monocytogenes, Salmonella, Escherichia coli O157:H7, and Staphylococc…

2008

Four commercial DNA extraction methods, PrepMan Ultra (Applied Biosystems), InstaGene Matrix (BioRad), DNeasy Tissue kit (Qiagen), and UltraClean (MoBio), were tested for PCR detection of Listeria monocytogenes, Escherichia coli O157: H7, Salmonella, and Staphylococcus aureus in fresh, minimally processed vegetables. For comparative purposes, sensitivity assays with specific PCRs were carried out after DNA extraction with the four methods in green pepper, broccoli, and onion artificially inoculated with the four pathogens separately. As confirmed by statistical analysis, the DNeasy Tissue kit rendered the highest sensitivity values in the three matrices assayed for Salmonella, L. monocytoge…

Assessment of Salmonella spp. in feces, cloacal swabs, and eggs (eggshell and content separately) from a laying hen farm.

2011

Microbial pathogens of the genus Salmonella are among the leading causes of foodborne illness in the world. The present study was done on a laying hen farm with a Salmonella enterica serovar Enteritidis-positive result according to the testing specified by European regulation 2160/2003. The aim of this study was to compare the Salmonella contamination on a laying hen farm with the Salmonella presence in the hen eggs. The strains were isolated by ISO method 6579:2002 (standard method for the detection of Salmonella spp. in the European regulation for food and animal feeding stuffs, animal feces, and environmental samples from the primary production stage, including poultry farms) and were co…

Genetic diversity and phenotypic characterization of Iodobacter limnosediminis associated with skin lesions in freshwater fish

2021

The relatively unknown genus Iodobacter sp. has been repeatedly isolated from skin ulcers and saprolegniosis on freshwater fish in Finland, especially farmed salmonids. Genetic characterization verified that all 23 bacterial isolates studied here belonged to the species Iodobacter limnosediminis, previously undescribed from the fish microbiota. Whole-genome pulsed-field gel electrophoresis revealed variability between the I. limnosediminis strains, suggesting that they were most likely of environmental origin. Two I. limnosediminis strains caused lesions in 27%–53% of brown trout (Salmo trutta) injected intramuscularly (p ≤ .05). The lesions represented moderate to severe tissue damage, but…

Characterization of the first extended-spectrum b-lactamase–producing nontyphoidal Salmonella strains Isolated in Tehran, Iran

2010

The infections caused by Salmonella remain a significant public health problem throughout the world. b-Lactams and fluoroquinolones are generally used to treat invasive Salmonella infections, but emergence and spread of antibiotic-resistant strains are being increasingly notified in many countries. In particular, detection of extended spectrum b-lactamases (ESBLs) in Salmonella spp. is a newly emerging threat worldwide. This study was carried out to characterize b-lactamase–producing Salmonella strains identified in Tehran, Iran. Over the 2-year period from 2007 to 2008, 6 of 136 Salmonella isolates recovered from pediatrics patients, including three Salmonella enterica serotypes Enteritidi…

Early-season river entry of adult Atlantic salmon: its dependency on environmental factors

2003

River entry of adult Atlantic salmon Salmo salar into the River Tornionjoki, monitored during three migration seasons (1997–1999) by horizontal split-beam hydroacoustics, started early in June when water temperature was c. 9° C and when the discharge varied between 1700 and 2000 m3 s−1. In 1997 and 1999, migration peaked during the latter half of June, 17 days after the peak flood, at water temperatures ranging from 11· 5 to 18·2° C. Few statistically significant correlations were observed between river entry and six measured environmental factors and those that were significant were not persistent over the years. The strongest correlation ( r = −0·60) was between the number of upstream mig…

Niche segregation of coexisting Arctic charr (Salvelinus alpinus) and brown trout (Salmo trutta) constrains food web coupling in subarctic lakes

2012

SUMMARY 1. Generalist fish species are recognised as important couplers of benthic and pelagic food-web compartments in lakes. However, interspecific niche segregation and individual specialisation may limit the potential for generalistic feeding behaviour. 2. We studied summer habitat use, stomach contents and stable isotopic compositions of the generalist feeder Arctic charr coexisting with its common resource competitor brown trout in five subarctic lakes in northern Norway to reveal population-level and individual-level niche plasticity. 3. Charr and trout showed partial niche segregation in all five lakes. Charr used all habitat types and a wide variety of invertebrate prey including z…

The effect of temperature fluctuations on oxygen consumption and ammonia excretion of underyearling Lake Inari Arctic charr

1998

Underyearling Lake Inari Arctic charr Salvelinus alpinus were acclimated to 11·0) C for 3 weeks, and then one group was maintained at 11·0) C and others were exposed to 14·4) Cconst, 17·7) Cconst or a diel fluctuating temperature of 14·3° C ± 1° C (14·3° Cfluc). Routine rates of oxygen consumption and ammonia excretion were measured over 10 days before the temperature change and over 31 days following the change. Measurements were made on fish that were feeding and growing. The temperature increase produced an immediate increase in oxygen consumption. There was then a decline over the next few days, suggesting that thermal acclimation was rapid. For groups exposed to constant temperature th…

Evidence of energy and nutrient transfer from invasive pink salmon ( Oncorhynchus gorbuscha ) spawners to juvenile Atlantic salmon ( Salmo salar ) an…

2020

Accurate Wound and Lice Detection in Atlantic Salmon Fish Using a Convolutional Neural Network

2022

The population living in the coastal region relies heavily on fish as a food source due to their vast availability and low cost. This need has given rise to fish farming. Fish farmers and the fishing industry face serious challenges such as lice in the aquaculture ecosystem, wounds due to injuries, early fish maturity, etc. causing millions of fish deaths in the fish aquaculture ecosystem. Several measures, such as cleaner fish and anti-parasite drugs, are utilized to reduce sea lice, but getting rid of them entirely is challenging. This study proposed an image-based machine-learning technique to detect wounds and the presence of lice in the live salmon fish farm ecosystem. A new equally di…

Environmentally driven changes in Baltic salmon oxidative status during marine migration.

2020

The fitness and recruitment of fish stocks can be markedly affected by environmental disturbances including global warming, eutrophication and contamination. Understanding the effects of environmental stressors on salmon physiology during marine residence is of a global concern as marine survival has decreased. We present a unique combination of physiological responses - antioxidant defence and oxidative damage biomarkers, stable isotopes and contaminant exposure biomarkers - measured from adult Atlantic salmon (Salmo salar) collected at the Baltic Sea and studied in relation to environmental variables and fitness estimates. The results demonstrate that feeding populations of salmon display…