Search results for "Sampling"
showing 10 items of 788 documents
Spatio-temporal variations in the application of the Braun-Blanquet approach in Europe
2018
An historical overview on the affirmation of the phytosociological method in Europe is presented. Some methodological and procedural differences in the application of the Braun-Blanquet approach, from the selection of the sampling plots to the assignment of relevés to existing or newly described units, are briefly commented. The main advantages and limitations of the phytosociological vegetation classification are reviewed and discussed, also in the light of their applications for vegetation mapping and monitoring.
Assessing sampling coverage of species distribution in biodiversity databases
2019
Abstract Aim Biodiversity databases are valuable resources for understanding plant species distributions and dynamics, but they may insufficiently represent the actual geographic distribution and climatic niches of species. Here we propose and test a method to assess sampling coverage of species distribution in biodiversity databases in geographic and climatic space. Location Europe. Methods Using a test selection of 808,794 vegetation plots from the European Vegetation Archive (EVA), we assessed the sampling coverage of 564 European vascular plant species across both their geographic ranges and realized climatic niches. Range maps from the Chorological Database Halle (CDH) were used as bac…
Establishing the occurrence and profile of polycyclic aromatic hydrocarbons in marine sediments: The eastern Mediterranean coast of Spain as a case s…
2019
Sampling, cost-effective analysis, diagnosis of sources of pollution and assessment of potential toxicological effects were included in the case study. Marine sediments collected from 24 points along the eastern Mediterranean coast of Spain (Comunitat Valenciana region) in 2010, 2011, 2012 and 2015 have been analysed for polycyclic aromatic hydrocarbons. Fluoranthene, pyrene, chrysene, benzo[b]fluoranthene and benzo[a]pyrene were the most found. An analysis of the relative abundance of selected PAHs revealed that petrogenic and mixed petrogenic/pyrogenic sources are predominant in the area. The total concentrations of the target compounds ranged from 14.7 to 615.3 ng/g dry weight. The effec…
Analysis of spatial patterns informs community assembly and sampling requirements for Collembola in forest soils
2018
Abstract The relative importance of niche separation, non-equilibrial and neutral models of community assembly has been a theme in community ecology for many decades with none appearing to be applicable under all circumstances. In this study, Collembola species abundances were recorded over eleven consecutive years in a spatially explicit grid and used to examine (i) whether observed beta diversity differed from that expected under conditions of neutrality, (ii) whether sampling points differed in their relative contributions to overall beta diversity, and (iii) the number of samples required to provide comparable estimates of species richness across three forest sites. Neutrality could not…
Accounting for preferential sampling in species distribution models
2019
D. C., A. L. Q. and F. M. would like to thank the Ministerio de Educación y Ciencia (Spain) for financial support (jointly financed by the European Regional Development Fund) via Research Grants MTM2013‐42323‐P and MTM2016‐77501‐P, and ACOMP/2015/202 from Generalitat Valenciana (Spain). Species distribution models (SDMs) are now being widely used in ecology for management and conservation purposes across terrestrial, freshwater, and marine realms. The increasing interest in SDMs has drawn the attention of ecologists to spatial models and, in particular, to geostatistical models, which are used to associate observations of species occurrence or abundance with environmental covariates in a fi…
Impact of sewage pollution on two species of sea urchins in the Mediterranean Sea (Cortiou, France): radial asymmetry as a bioindicator of stress.
2015
9 pages; International audience; BackgroundThe surroundings of the Cortiou sewage are among the most polluted environments of the French Mediterranean Sea (Marseilles, France). So far, no studies have precisely quantified the impact of pollution on the development of organisms in this area.MethodsWe used a fluctuating asymmetry (FA) measure of developmental instability (DI) to assess environmental stress in two species of radially symmetric sea urchins (Arbacia lixula and Paracentrotus lividus). For six sampling sites (Cortiou, Riou, Maire, East Maire, Mejean, and Niolon), levels of FA were calculated from continuous and discrete skeletal measures of ambulacral length, number of pore pairs …
Stable isotopes reveal differences in diet among reed bunting subspecies that vary in bill size
2017
Reed bunting Emberiza schoeniclus subspecies vary considerably in bill size and shape and seem to be at an early stage of speciation, in which bill might be indirectly causing reproductive isolation. Hence, we evaluated whether bill size, as well as age and sex, are associated with foraging niche in three west European subspecies of reed bunting: the thin-billed schoeniclus, the intermediate-billed lusitanica and the thick-billed witherbyi. Blood sampling was undertaken at three sites in southwest Europe during the winter (when these subspecies co-occur), and stable isotope analyses (carbon and nitrogen) were performed to assess their foraging niches. Stable isotope analyses of potential fo…
A novel method to predict dark diversity using unconstrained ordination analysis
2019
[Questions] Species pools are the product of complex ecological and evolutionary mechanisms, operating over a range of spatial scales. Here, we focus on species absent from local sites but with the potential to establish within communities — known as dark diversity. Methods for estimating dark diversity are still being developed and need to be compared, as well as tested for the type, and amount, of reference data needed to calibrate these methods. [Location] South Bohemia (48°58′ N, 14°28′ E) and Železné Hory (49°52′ N, 15°34′ E), Czech Republic. [Method] We compared a widely accepted algorithm to estimate species pools (Beals smoothing index, based on species co-occurrence) against a nove…
Thompson Sampling Based Active Learning in Probabilistic Programs with Application to Travel Time Estimation
2019
The pertinent problem of Traveling Time Estimation (TTE) is to estimate the travel time, given a start location and a destination, solely based on the coordinates of the points under consideration. This is typically solved by fitting a function based on a sequence of observations. However, it can be expensive or slow to obtain labeled data or measurements to calibrate the estimation function. Active Learning tries to alleviate this problem by actively selecting samples that minimize the total number of samples needed to do accurate inference. Probabilistic Programming Languages (PPL) give us the opportunities to apply powerful Bayesian inference to model problems that involve uncertainties.…
The effects of data collection and observation methods on uncertainty of social networks in wild primates
2020
International audience; In social species, network centralities of group members shape social transmission and other social phenomena. Different factors have been found to influence the measurement of social networks, such as data collection and observation methods. In this study, we collected data on adults and juveniles and examined the effect of data collection method (ad libitum sampling vs. focal animal sampling) and observation method (interaction—grooming; play—vs. association—arm‐length; 2 m; 5 m proximities—) on social networks in wild vervet monkeys. First, we showed using a bootstrapping method, that uncertainty of ad libitum grooming and play matrices were lesser than uncertaint…