Search results for "Segmentation"
showing 10 items of 674 documents
Iteratively Learning a Liver Segmentation Using Probabilistic Atlases: Preliminary Results
2016
This works deals with the concept of liver segmentation by using a priori information based on probabilistic atlases and segmentation learning based of previous steps. A probabilistic atlas is here understood as a probability or membership map that tells how likely is that a point belongs to a shape drawn from the shape distribution at hand. We devise a procedure to segment Perfusion Magnetic Resonance liver images that combines both: a probabilistic atlas of the liver and a segmentation algorithm based on global information of previous simpler segmentation steps, local information from close segmented slices and finally a mathematical morphology procedure, namely viscous reconstruction, to…
A new image segmentation approach using community detection algorithms
2015
Image segmentation has an important role in many image processing applications. Several methods exist for segmenting an image. However, this technique is still a relatively open topic for which various research works are regularly presented. With the recent developments on complex networks theory, image segmentation techniques based on graphs has considerably improved. In this paper, we present a new perspective of image segmentation, by applying three of the most efficient community detection algorithms, Louvain, infomap and stability optimization based on the louvain algorithm, and we extract communities in which the highest modularity feature is achieved. After we show that this measure …
Automatic skull stripping in MRI based on morphological filters and fuzzy c-means segmentation
2012
In this paper a new automatic skull stripping method for T1-weighted MR image of human brain is presented. Skull stripping is a process that allows to separate the brain from the rest of tissues. The proposed method is based on a 2D brain extraction making use of fuzzy c-means segmentation and morphological operators applied on transversal slices. The approach is extended to the 3D case, taking into account the result obtained from the preceding slice to solve the organ splitting problem. The proposed approach is compared with BET (Brain Extraction Tool) implemented in MRIcro software.
A Wavelet approach to extract main features from indirect immunofluorescence images
2019
A number of previous studies have shown that IIF image analysis requires complex and sometimes heterogeneous and diversified methods. Robust solutions can be proposed but they need to orchestrate several methods from low-level analysis up to more complex neural networks or SVM for data classification. The contribution intends to highlight the versatility of Wavelet Transform (WT) and their use in various levels of analysis for the classification of IIF images in order to develop a system capable of performing: image enhancement, ROI segmentation and object classification. Therefore, WT was adopted in the de-noise section, segmentation and classification. This analysis allows frequencies cha…
Exudates as Landmarks Identified through FCM Clustering in Retinal Images
2020
The aim of this work was to develop a method for the automatic identification of exudates, using an unsupervised clustering approach. The ability to classify each pixel as belonging to an eventual exudate, as a warning of disease, allows for the tracking of a patient&rsquo
Efficient Multi-scale Patch-Based Segmentation
2015
The objective of this paper is to devise an efficient and accurate patch-based method for image segmentation. The method presented in this paper builds on the work of Wu et al. [14] with the introduction of a compact multi-scale feature representation and heuristics to speed up the process. A smaller patch representation along with hierarchical pruning allowed the inclusion of more prior knowledge, resulting in a more accurate segmentation. We also propose an intuitive way of optimizing the search strategy to find similar voxel, making the method computationally efficient. An additional approach at improving the speed was explored with the integration of our method with Optimised PatchMatch…
Semi-automatic Brain Lesion Segmentation in Gamma Knife Treatments Using an Unsupervised Fuzzy C-Means Clustering Technique
2016
MR Imaging is being increasingly used in radiation treatment planning as well as for staging and assessing tumor response. Leksell Gamma Knife (R) is a device for stereotactic neuro-radiosurgery to deal with inaccessible or insufficiently treated lesions with traditional surgery or radiotherapy. The target to be treated with radiation beams is currently contoured through slice-by-slice manual segmentation on MR images. This procedure is time consuming and operator-dependent. Segmentation result repeatability may be ensured only by using automatic/semi-automatic methods with the clinicians supporting the planning phase. In this paper a semi-automatic segmentation method, based on an unsuperv…
Filter Bank: a Directional Approach for Retinal Vessel Segmentation
2017
It is well known that retinal diseases are sometimes identified by tortuosity of the vessels, presence of exudates and hemorrhages while lesions of tissues are associated to diabetic retinopathy, retinopathy of prematurity and more general cerebrovascular problems. One of the main issues in this research field is detecting small curvilinear structures, thus the aim of this contribution is to introduce a non-supervised and automated methodology to detect features such as curvilinear structures in retinal images. The core of the proposed methodology consists in using an approach that resembles the “a trous” wavelet algorithm. With respect to the standard Gabor analysis our methodology is base…
Optimal Filter Estimation for Lucas-Kanade Optical Flow
2012
Optical flow algorithms offer a way to estimate motion from a sequence of images. The computation of optical flow plays a key-role in several computer vision applications, including motion detection and segmentation, frame interpolation, three-dimensional scene reconstruction, robot navigation and video compression. In the case of gradient based optical flow implementation, the pre-filtering step plays a vital role, not only for accurate computation of optical flow, but also for the improvement of performance. Generally, in optical flow computation, filtering is used at the initial level on original input images and afterwards, the images are resized. In this paper, we propose an image filt…
Deep Learning-Based Methods for Prostate Segmentation in Magnetic Resonance Imaging
2021
Magnetic Resonance Imaging-based prostate segmentation is an essential task for adaptive radiotherapy and for radiomics studies whose purpose is to identify associations between imaging features and patient outcomes. Because manual delineation is a time-consuming task, we present three deep-learning (DL) approaches, namely UNet, efficient neural network (ENet), and efficient residual factorized convNet (ERFNet), whose aim is to tackle the fully-automated, real-time, and 3D delineation process of the prostate gland on T2-weighted MRI. While UNet is used in many biomedical image delineation applications, ENet and ERFNet are mainly applied in self-driving cars to compensate for limited hardwar…