Search results for "Simulation and modeling"

showing 10 items of 38 documents

Experiment of Indoor Thermal Optimization of an Old Historic Building of Cluny through Digital Mock-up Simulation

2013

International audience; Improving energy efficiency is the first and most important step toward achieving sustainability in buildings. Buildings designed with sustainable solutions are usually energy-efficient because sustainable design is aimed at producing green buildings. In the case of historic buildings, however, this is quite challenging. Integrated building energy simulation programs have been used in various ways by building professionals to respond to these challenges and to improve building design with respect to sustainability. This poster presents a new approach toward optimizing thermal indoor energy using a digital mock-up simulation of a historical building to explore its pot…

Indoor thermalenergy optimization.[INFO.INFO-GR] Computer Science [cs]/Graphics [cs.GR]I.6.5 [Simulation and Modeling]: Model Development Modeling Methodologies J.6 [Computer-aided Engineering]: Computer-aided Design J.5 [Arts and Humanities]: Architecture.energy optimization[ INFO.INFO-GR ] Computer Science [cs]/Graphics [cs.GR]simulation[INFO.INFO-GR]Computer Science [cs]/Graphics [cs.GR]
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Interactions of pharmaceutical companies with world countries, cancers and rare diseases from Wikipedia network analysis

2019

AbstractUsing the English Wikipedia network of more than 5 million articles we analyze interactions and interlinks between the 34 largest pharmaceutical companies, 195 world countries, 47 rare renal diseases and 37 types of cancer. The recently developed algorithm using a reduced Google matrix (REGOMAX) allows us to take account both of direct Markov transitions between these articles and also of indirect transitions generated by the pathways between them via the global Wikipedia network. This approach therefore provides a compact description of interactions between these articles that allows us to determine the friendship networks between them, as well as the PageRank sensitivity of countr…

InternationalityComputer scienceSocial Sciences01 natural scienceslaw.inventionSociologylawNeoplasmsBreast TumorsMedicine and Health SciencesDrug InteractionsComputingMilieux_MISCELLANEOUSMarketing0303 health sciencesGoogle matrixApplied MathematicsSimulation and ModelingQROnline Encyclopedias[SDV.SP]Life Sciences [q-bio]/Pharmaceutical sciencesInfectious DiseasesOncologyNephrologyGenetic DiseasesPhysical SciencesMedicineAnatomyAlgorithmsNetwork analysisResearch ArticleMarket capitalization[INFO.INFO-CC]Computer Science [cs]/Computational Complexity [cs.CC]Drug IndustryScience[SDV.CAN]Life Sciences [q-bio]/CancerResearch and Analysis MethodsStatistics Nonparametric[INFO.INFO-SI]Computer Science [cs]/Social and Information Networks [cs.SI]03 medical and health sciencesRare DiseasesPageRank0103 physical sciencesBreast CancerRenal DiseasesHumansMass Media010306 general physics030304 developmental biologyClinical GeneticsPharmacologyInternetCancers and NeoplasmsBiology and Life SciencesKidneysRenal SystemData scienceCommunicationsEncyclopediasFabry Disease[INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM]Mathematics
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Incidence rates of narcolepsy diagnoses in Taiwan, Canada, and Europe: The use of statistical simulation to evaluate methods for the rapid assessment…

2018

Vacunación; Narcolepsia; Simulación y modelado: en Vacunació; Narcolèpsia; Simulació i modelització Vaccination; Narcolepsy; Simulation and modeling Background & objectives Vaccine safety signals require investigation, which may be done rapidly at the population level using ecological studies, before embarking on hypothesis-testing studies. Incidence rates were used to assess a signal of narcolepsy following AS03-adjuvanted monovalent pandemic H1N1 (pH1N1) influenza vaccination among children and adolescents in Sweden and Finland in 2010. We explored the utility of ecological data to assess incidence of narcolepsy following exposure to pandemic H1N1 virus or vaccination in 10 sites that use…

Male:Other subheadings::Other subheadings::/epidemiology [Other subheadings]medicine.medical_treatmentlcsh:Medicine:Other subheadings::Other subheadings::/drug therapy [Other subheadings]medicine.disease_causeGeographical locations:enfermedades del sistema nervioso::trastornos del sueño-vigilia::disomnias::trastornos intrínsecos del sueño::trastornos de somnolencia excesiva::narcolepsia [NarcolepsiaENFERMEDADES]Influenza A Virus H1N1 Subtype0302 clinical medicineRisk FactorsPandemicMedicine and Health SciencesInfluenza A virusMedicinePublic and Occupational Health030212 general & internal medicineYoung adultChildlcsh:Science:Otros calificadores::Otros calificadores::/tratamiento farmacológico [Otros calificadores]Aged 80 and overVaccinesMultidisciplinaryIncidenceSimulation and ModelingIncidence (epidemiology)Vaccination:Otros calificadores::Otros calificadores::/epidemiología [Otros calificadores]Middle AgedVaccination and ImmunizationEuropeVaccinationInfectious DiseasesNeurologyInfluenza VaccinesChild PreschoolsymbolsEngineering and TechnologyFemaleSafetyNarcolèpsia - TractamentAdjuvantResearch ArticleAdultCanadaAsiaAdolescentInfectious Disease ControlImmunologyTaiwanResearch and Analysis MethodsYoung Adult03 medical and health sciencessymbols.namesakeAdjuvants ImmunologicEnvironmental healthInfluenza HumanHumansComputer SimulationEuropean UnionPoisson regressionAgedTrastorns del sonNarcolepsySwedenModels Statisticalbusiness.industrylcsh:RInfant NewbornNarcolèpsia - EpidemiologiaInfantBiology and Life SciencesDyssomniasAge GroupsR - MedicineRelative riskSignal ProcessingPopulation Groupingslcsh:QPreventive MedicinePeople and placesSleep Disordersbusiness030217 neurology & neurosurgeryPLOS ONE
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The Evonik-Mainz Eye Care-Study (EMECS): Development of an Expert System for Glaucoma Risk Detection in a Working Population

2015

Purpose To develop an expert system for glaucoma screening in a working population based on a human expert procedure using images of optic nerve head (ONH), visual field (frequency doubling technology, FDT) and intraocular pressure (IOP). Methods 4167 of 13037 (32%) employees between 40 and 65 years of Evonik Industries were screened. An experienced glaucoma expert (JW) assessed papilla parameters and evaluated all individual screening results. His classification into “no glaucoma”, “possible glaucoma” and “probable glaucoma” was defined as “gold standard”. A screening model was developed which was tested versus the gold-standard. This model took into account the assessment of the ONH. Valu…

MaleIntraocular pressureEye Diseasesgenetic structuresOptic disklcsh:MedicineGlaucomacomputer.software_genreNerve Fibers0302 clinical medicineCost of IllnessRisk FactorsAnimal CellsOdds RatioPrevalenceMedicine and Health SciencesMedicine030212 general & internal medicinelcsh:ScienceNeuronsMultidisciplinaryPharmaceuticsApplied MathematicsSimulation and ModelingMiddle AgedVisual fieldPhysical SciencesFemaleAnatomyCellular TypesAlgorithmsResearch ArticleAdultmedicine.medical_specialtyOptic DiskResearch and Analysis MethodsSensitivity and SpecificityDiagnosis DifferentialTonometry Ocular03 medical and health sciencesDrug TherapyOcular SystemOphthalmologyHumansWorking populationIntraocular PressureAgedbusiness.industrylcsh:RBiology and Life SciencesGlaucomaOptic NerveCell BiologyOdds ratioGold standard (test)medicine.diseaseeye diseasesExpert systemOphthalmologyCellular Neuroscience030221 ophthalmology & optometryVisual Field TestsEyesOptometrylcsh:Qsense organsVisual FieldsbusinessHeadcomputerMathematicsNeurosciencePLOS ONE
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Problem-based learning for anesthesia resident operating room crisis management training.

2018

Background Senior anesthesia residents must acquire competency in crisis management for operating room (OR) emergencies. We conducted problem based learning (PBL) OR emergency scenarios for anesthesia residents, focused on emergencies in ‘Airway’, ‘Circulation’, ‘Central venous catheter’, and ‘Pain management complications’. Non-technical skills are an integral component of team-based OR emergency management. Methods Prior to integrated OR emergency clinical and non-technical skills PBL training, participating 35 anesthesia residents completed two 5-point scale surveys regarding frequency of emergency experiences in the operating room, and self-confidence for anesthesia-related crisis manag…

MaleOperating RoomsCritical Care and Emergency Medicinemedicine.medical_treatmentSocial SciencesCrew resource managementlcsh:MedicineCrisis managementLearning and Memory0302 clinical medicineAnesthesiology030202 anesthesiologyMedicine and Health SciencesCardiac ArrestPsychologyIntubationAnesthesia030212 general & internal medicinelcsh:ScienceMultidisciplinaryEmergency managementPharmaceuticsSimulation and ModelingProblem-based learningScale (social sciences)AnesthesiaEngineering and TechnologyFemaleClinical CompetenceCentral venous catheterResearch ArticleBiotechnologyCatheterseducationCardiologyBioengineeringSurgical and Invasive Medical ProceduresResearch and Analysis Methods03 medical and health sciencesDrug TherapymedicineLearningPain ManagementHumansbusiness.industryCrew Resource Management Healthcarelcsh:RCognitive PsychologyBiology and Life SciencesInternship and ResidencyProblem-Based LearningSelf ConceptCognitive ScienceMedical Devices and Equipmentlcsh:QIntubationbusinessAirwayNeurosciencePLoS ONE
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Physiologically based metformin pharmacokinetics model of mice and scale-up to humans for the estimation of concentrations in various tissues

2020

Metformin is the primary drug for type 2 diabetes treatment and a promising candidate for other disease treatment. It has significant deviations between individuals in therapy efficiency and pharmacokinetics, leading to the administration of an unnecessary overdose or an insufficient dose. There is a lack of data regarding the concentration-time profiles in various human tissues that limits the understanding of pharmacokinetics and hinders the development of precision therapies for individual patients. The physiologically based pharmacokinetic (PBPK) model developed in this study is based on humans’ known physiological parameters (blood flow, tissue volume, and others). The missing tissue-s…

MalePhysiologyAdipose tissueType 2 diabetesPharmacology030226 pharmacology & pharmacyMice0302 clinical medicineAnimal CellsRed Blood CellsMedicine and Health SciencesTissue Distribution0303 health sciencesMultidisciplinarySimulation and ModelingQRMetforminBody Fluids3. Good healthMetforminBloodmedicine.anatomical_structureSmall IntestineMedicineAnatomyCellular TypesResearch Articlemedicine.drugPhysiologically based pharmacokinetic modellingScienceExcretionCmaxResearch and Analysis MethodsModels BiologicalBlood Plasma03 medical and health sciencesPharmacokineticsmedicineAnimalsHumansHypoglycemic AgentsComputer SimulationPharmacokinetics030304 developmental biologyPharmacologyBlood CellsDose-Response Relationship Drugbusiness.industryBiology and Life SciencesKidneysRenal SystemCell BiologyBlood flowmedicine.diseaseSmall intestineGastrointestinal TractDiabetes Mellitus Type 2Physiological ProcessesbusinessDigestive SystemPLOS ONE
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The COPD multi-dimensional phenotype: A new classification from the STORICO Italian observational study.

2019

BackgroundThis paper is aimed to (i) develop an innovative classification of COPD, multi-dimensional phenotype, based on a multidimensional assessment; (ii) describe the identified multi-dimensional phenotypes.MethodsAn exploratory factor analysis to identify the main classificatory variables and, then, a cluster analysis based on these variables were run to classify the COPD-diagnosed 514 patients enrolled in the STORICO (trial registration number: NCT03105999) study into multi-dimensional phenotypes.ResultsThe circadian rhythm of symptoms and health-related quality of life, but neither comorbidity nor respiratory function, qualified as primary classificatory variables. Five multidimension…

MalePulmonologyPhysiologyComorbidityAnxietyPathology and Laboratory MedicineCohort StudiesPulmonary Disease Chronic ObstructiveMathematical and Statistical TechniquesQuality of lifeMedicine and Health SciencesCoughingCluster AnalysisRespiratory functionPublic and Occupational HealthAged 80 and overCOPDMultidisciplinaryDepressionApplied MathematicsSimulation and ModelingQStatisticsRMiddle AgedExploratory factor analysisCircadian RhythmBody FluidsCircadian RhythmsPhenotypeItalyPhysical SciencesAnxietyMedicineFemalemedicine.symptomAnatomyFactor AnalysisAlgorithmsCohort studyResearch Articlemedicine.medical_specialtyScienceMemory EpisodicChronic Obstructive Pulmonary DiseaseSettore MED/10 - Malattie Dell'Apparato RespiratorioResearch and Analysis MethodsClustering AlgorithmsSigns and SymptomsDiagnostic MedicineInternal medicinemedicineCOPDHumansStatistical MethodsAgedbusiness.industryBiology and Life SciencesPhysical Activitymedicine.diseaseComorbidityrespiratory tract diseasesMucusDyspneaCoughQuality of LifeObservational studybusinessFactor Analysis StatisticalSleepPhysiological ProcessesChronobiologymultiple phenotypesMathematicsPloS one
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Three dimensional reconstruction to visualize atrial fibrillation activation patterns on curved atrial geometry

2021

BackgroundThe rotational activation created by spiral waves may be a mechanism for atrial fibrillation (AF), yet it is unclear how activation patterns obtained from endocardial baskets are influenced by the 3D geometric curvature of the atrium or ‘unfolding’ into 2D maps. We develop algorithms that can visualize spiral waves and their tip locations on curved atrial geometries. We use these algorithms to quantify differences in AF maps and spiral tip locations between 3D basket reconstructions, projection onto 3D anatomical shells and unfolded 2D surfaces.MethodsWe tested our algorithms in N = 20 patients in whom AF was recorded from 64-pole baskets (Abbott, CA). Phase maps were generated by…

Malemedicine.medical_treatmentGeometryProjection (mathematics)Atrial FibrillationMedicine and Health SciencesElectrochemistryPower DistributionAtrium (heart)Cardiac AtriaSpiralPhysicsNumerical AnalysisMultidisciplinaryApplied MathematicsSimulation and ModelingQRAtrial fibrillationSignal Processing Computer-AssistedHeartMiddle AgedAblationChemistrymedicine.anatomical_structurePhysical SciencesCatheter AblationMedicineEngineering and TechnologyGravitational singularityFemaleAnatomyElectrophysiologic Techniques CardiacAlgorithmsArrhythmiaResearch ArticleBiotechnologyPower GridsCathetersSciencePhase (waves)CardiologyGeometryBioengineeringCurvatureResearch and Analysis MethodsImaging Three-DimensionalmedicineHumansImatges tridimensionals en medicinaCurvatureElectrode PotentialsBiology and Life Sciencesmedicine.diseaseInterpolationEnergy and PowerCardiovascular AnatomyMedical Devices and EquipmentMathematics
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The Low Energy-Coupling Respiration in Zymomonas mobilis Accelerates Flux in the Entner-Doudoroff Pathway.

2015

Performing oxidative phosphorylation is the primary role of respiratory chain both in bacteria and eukaryotes. Yet, the branched respiratory chains of prokaryotes contain alternative, low energy-coupling electron pathways, which serve for functions other than oxidative ATP generation (like those of respiratory protection, adaptation to low-oxygen media, redox balancing, etc.), some of which are still poorly understood. We here demonstrate that withdrawal of reducing equivalents by the energetically uncoupled respiratory chain of the bacterium Zymomonas mobilis accelerates its fermentative catabolism, increasing the glucose consumption rate. This is in contrast to what has been observed in o…

Metabolic Processes0301 basic medicineRespiratory chainlcsh:MedicineBiochemistryOxidative PhosphorylationGlucose Metabolismlcsh:ScienceZymomonasMultidisciplinarybiologyOrganic CompoundsSimulation and ModelingMonosaccharidesChemical ReactionsCatabolismAerobiosisEnzymesChemistryBiochemistryPhysical SciencesCarbohydrate MetabolismOxidoreductasesOxidation-ReductionResearch Article030106 microbiologyCarbohydratesAcetaldehydeOxidative phosphorylationResearch and Analysis MethodsZymomonas mobilisElectron Transport03 medical and health sciencesOxidationEntner–Doudoroff pathwayDehydrogenasesOrganic Chemistrylcsh:RChemical CompoundsBiology and Life SciencesProteinsNADbiology.organism_classificationElectron transport chainKineticsGlucoseMetabolismFermentationEnzymologyFermentationlcsh:QFlux (metabolism)BacteriaPLoS ONE
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A Structural Model of the Human α7 Nicotinic Receptor in an Open Conformation

2015

International audience; Nicotinic acetylcholine receptors (nAchRs) are ligand-gated ion channels that regulate chemical transmission at the neuromuscular junction. Structural information is available at low resolution from open and closed forms of an eukaryotic receptor, and at high resolution from other members of the same structural family, two prokaryotic orthologs and an eukary- otic GluCl channel. Structures of human channels however are still lacking. Homology modeling and Molecular Dynamics simulations are valuable tools to predict structures of unknown proteins, however, for the case of human nAchRs, they have been unsuccessful in providing a stable open structure so far. This is du…

Models MolecularHydrogen bondingalpha7 Nicotinic Acetylcholine ReceptorProtein ConformationMolecular Sequence DataMESH: Sequence Alignmentligand gated ion channles molecular dynamics simulation epibatidine waterlcsh:MedicineSequence alignmentMESH: Amino Acid SequenceMolecular Dynamics SimulationMESH: Models Molecular*Molecular dynamicsProtein structureSequence alignmentCationsHumansMESH: Molecular Dynamics SimulationHomology modelingAmino Acid SequenceNicotinic Receptorlcsh:ScienceBiochemical simulationsIon channelAcetylcholine receptorIonsMESH: Protein Conformation*MultidisciplinaryMESH: HumansMESH: Molecular Sequence DataChemistryMESH: Protein Multimerizationlcsh:RMESH: alpha7 Nicotinic Acetylcholine Receptor/chemistry*[SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM]Transmembrane proteinSimulation and modelingNicotinic agonistBiochemistryBiophysicsProtein structurelcsh:QProtein MultimerizationResearch ArticleStructural Model
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