Search results for "Sipuncula"

showing 6 items of 6 documents

Respiratory proteins in Sipunculus nudus--implications for phylogeny and evolution of the hemerythrin family.

2009

Three major classes of respiratory proteins are known, hemoglobin, molluscan and arthropod hemocyanin, and hemerythrin (Hr). Similar to hemoglobin, respiratory Hr is packed into erythrocytes floating in the coelomic fluid and is only known from sipunculids, brachiopods, and priapulids. Owing to this scattered distribution, the presence of Hr is generally assumed to be the plesiomorphic condition without phylogenetic importance. By sequencing 2000 Expressed Sequence Tags (ESTs) from Sipunculus nudus, we found 75 Hr-coding ESTs assembled to 20 cDNA contigs classified as four distinct Hr isoforms: three polymeric Hrs (subunit A, A', and B) and the monomeric myo-hemerythrin (myoHr). Phylogeneti…

NematodaPhysiologymedicine.medical_treatmentBiochemistryHemerythrinEvolution MolecularPhylogeneticsSipunculus nudusmedicineAnimalsProtein IsoformsMolecular BiologyPhylogenySipunculaExpressed Sequence TagsExpressed sequence tagLikelihood FunctionsAnnelidPhylogenetic treebiologyRespirationHemocyaninBayes TheoremAnatomybiology.organism_classificationHemerythrinBiochemistryGene Expression RegulationMultigene FamilyComparative biochemistry and physiology. Part B, Biochemistrymolecular biology
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Komposisi Kimia Cacing Kacang (Sipunculus nudus) di Kabupaten Raja Ampat dan Kabupaten Manokwari

2017

Filum Sipuncula adalah biota laut unik, dari penampilan luarnya. Hewan ini mirip dengan cacing, sehingga diistilahkan peanut worm. Masyarakat pesisir Papua khususnya di Papua Barat telah memanfaatkan organisme ini sebagai bahan pangan, tetapi komposisi gizi dari spesies inu belum banyak dibahas. Penelitian dilakukan Maret-April 2014, bertujuan untuk mengetahui komposisi kimia dari Sipuncula nudus yang diambil dari perairan Raja Ampat dan Manokwari. Hasil menunjukkan bahwa kadar air S. nudus dari Kelurahan Sowi 4 Manokwari) yaitu 8.06%, kadar lemak tertinggi terdapat pada Kampung Amdui Raja Ampat) yaitu 1.70%, kadar protein tertinggi berasal dari Kampung Amdui Raja Ampat) yaitu 82.46%, karbo…

Phylum SipunculaVeterinary medicineFat contentEcologyBiologyJURNAL SUMBERDAYA AKUATIK INDOPASIFIK
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Annelid Coelomic Fluid Proteins

2020

The coelomic cavity is part of the main body plan of annelids. This fluid filled space takes up a considerable volume of the body and serves as an important site of exchange of both metabolites and proteins. In addition to low molecular substances such as amino acids and glucose and lactate, the coelomic fluid contains different proteins that can arise through release from adjacent tissues (intestine) or from secretion by coelomic cells. In this chapter, we will review the current knowledge about the proteins in the annelid coelomic fluid. Given the number of more than 20,000 extant annelid species, existing studies are confined to a relatively few species. Most studies on the oligochaetes …

0301 basic medicinechemistry.chemical_classificationSipunculaEchiuraAnnelid030102 biochemistry & molecular biologybiologyAntimicrobial peptidesbiology.organism_classificationAmino acid03 medical and health sciencesVitellogenin030104 developmental biologychemistryBiochemistrybiology.proteinCoelomVitellogenesis
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Phylogenomic analyses unravel annelid evolution

2011

Annelida, the ringed worms, is a highly diverse animal phylum that includes more than 15,000 described species and constitutes the dominant benthic macrofauna from the intertidal zone down to the deep sea. A robust annelid phylogeny would shape our understanding of animal body-plan evolution and shed light on the bilaterian ground pattern. Traditionally, Annelida has been split into two major groups: Clitellata (earthworms and leeches) and polychaetes (bristle worms), but recent evidence suggests that other taxa that were once considered to be separate phyla (Sipuncula, Echiura and Siboglinidae (also known as Pogonophora)) should be included in Annelida(1-4). However, the deep-level evoluti…

Expressed Sequence TagsSipunculaEchiuraGenomeMultidisciplinaryAnnelidbiologySiboglinidaeEcologyPhylumAnnelidaClitellataGenomicsbiology.organism_classificationModels BiologicalEvolutionary biologyAnimalsErrantiaInstitut für Biochemie und BiologiePhylogenyPlatynereisNature
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Spiralian phylogenomics supports the resurrection of Bryozoa comprising Ectoprocta and Entoprocta.

2007

Phylogenetic analyses based on 79 ribosomal proteins of 38 metazoans, partly derived from 6 new expressed sequence tag projects for Ectoprocta, Entoprocta, Sipuncula, Annelida, and Acanthocephala, indicate the monophyly of Bryozoa comprising Ectoprocta and Entoprocta, 2 taxa that have been separated for more than a century based on seemingly profound morphological differences. Our results also show that bryozoans are more closely related to Neotrochozoa, including molluscs and annelids, than to Syndermata, the latter comprising Rotifera and Acanthocephala. Furthermore, we find evidence for the position of Sipuncula within Annelida. These findings suggest that classical developmental and mor…

SipunculabiologyEntoproctaModels GeneticAnnelidaAnatomyGenomicsbiology.organism_classificationBryozoaMonophylyEvolutionary biologyPhylogeneticsPlatyhelminthsPhylogenomicsGeneticsBryozoaAnimalsSpiraliaAcanthocephalaMolecular BiologyEcology Evolution Behavior and SystematicsPhylogenyMolecular biology and evolution
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Mitochondrial genome sequence and gene order of Sipunculus nudus give additional support for an inclusion of Sipuncula into Annelida.

2010

Abstract Background Mitochondrial genomes are a valuable source of data for analysing phylogenetic relationships. Besides sequence information, mitochondrial gene order may add phylogenetically useful information, too. Sipuncula are unsegmented marine worms, traditionally placed in their own phylum. Recent molecular and morphological findings suggest a close affinity to the segmented Annelida. Results The first complete mitochondrial genome of a member of Sipuncula, Sipunculus nudus, is presented. All 37 genes characteristic for metazoan mtDNA were detected and are encoded on the same strand. The mitochondrial gene order (protein-coding and ribosomal RNA genes) resembles that of annelids, b…

Mitochondrial DNAlcsh:QH426-470Nematodalcsh:BiotechnologyAnnelidaBiologyGenomeDNA MitochondrialEvolution MolecularPhylogeneticslcsh:TP248.13-248.65ddc:570Sipunculus nudusGene OrderGeneticsAnimalsGeneInstitut für Biochemie und BiologiePhylogenyGeneticsSipunculaExpressed Sequence TagsAnnelidPhylogenetic treeSequence Analysis DNAbiology.organism_classificationlcsh:GeneticsGenes MitochondrialGenome MitochondrialBiotechnologyResearch ArticleBMC genomics
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