Search results for "Soma"

showing 10 items of 2624 documents

On the Occurrence of the Invasive Freshwater Limpet Ferrissia californica (Mollusca: Gastropoda: Planorbidae) in Japan.

2018

Two members of the genus Ferrissia Walker, 1903, namely Ferrissia nipponica (Kuroda, 1949) and F. japonica Habe and Burch, 1965, have been reported to occur in Japan, but due to a lack of molecular data, doubts have been expressed as to their validity. Furthermore, the possible presence of allochthonous Ferrissia taxa has been stated under a variety of names, so that even now there is no consensus on their presence and identity. Recently, freshwater limpets belonging to the planorbid genus Ferrissia were collected in an irrigation trough on the Izu island of Hachijōjima, Tokyo, Japan. Molecular identification of the collected specimens, based on a fragment of the large ribosomal subunit 16S…

0106 biological sciences0301 basic medicineSpecies complexGastropodaZoologymolecular identificationbiological invasionFresh Water010603 evolutionary biology01 natural sciencesDNA Mitochondrial03 medical and health sciencesAncyliniJapanGenusLarge ribosomal subunitRNA Ribosomal 16SGastropodaAnimalsAncylinibiologyLimpetfreshwater limpetbiology.organism_classificationHachijojima030104 developmental biologyPlanorbidaeFerrissiacryptic specieAnimal Science and ZoologyIntroduced SpeciesAnimal DistributionZoological science
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Disentangling structural genomic and behavioural barriers in a sea of connectivity

2019

18 pages, 4 tables, 3 figures.-- This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited

0106 biological sciences0301 basic medicineSympatryReproductive IsolationChromosomal rearrangementsPopulation010603 evolutionary biology01 natural sciencesGene flow03 medical and health sciencesBehavioural traitsGeneticsAnimalsGadus14. Life underwaterSelection GeneticAdaptationeducationEcology Evolution Behavior and Systematicseducation.field_of_studySympatric divergencebiologyGenetic DriftHomozygoteGenetic VariationReproductive isolationbiology.organism_classificationSpecial Issue on the Role of Genomic Structural Variants in Adaptation and DiversificationGene flowGenetic divergenceSympatrySpecial Issue: The Role of Genomic Structural Variants in Adaptation and Diversification030104 developmental biologyGadus morhuaSympatric speciationEvolutionary biologyAtlantic codChromosome InversionGenetic FitnessAtlantic cod
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Comparable response of wild rodent gut microbiome to anthropogenic habitat contamination

2021

Abstract Species identity is thought to dominate over environment in shaping wild rodent gut microbiota, but it remains unknown whether the responses of host gut microbiota to shared anthropogenic habitat impacts are species-specific or if the general gut microbiota response is similar across host species. Here, we compare the influence of exposure to radionuclide contamination on the gut microbiota of four wild mouse species: Apodemus flavicollis, A. sylvaticus, A. speciosus and A. argenteus. Building on the evidence that radiation impacts bank vole (Myodes glareolus) gut microbiota, we hypothesized that radiation exposure has a general impact on rodent gut microbiota. Because we sampled (…

0106 biological sciences0301 basic medicineSympatryRodentanthropogenic disturbancejyrsijätsuolistomikrobistoZoologygut microbiomeGut flora010603 evolutionary biology01 natural sciencesdigestive systembakteeritMice03 medical and health sciencesPhylogeneticsRNA Ribosomal 16Sbiology.animalGeneticsAnimalspollutionmikrobitEcology Evolution Behavior and SystematicsbiologyArvicolinaeHost (biology)ympäristön saastuminenMicrobiotaionisoiva säteilybiology.organism_classificationGastrointestinal Microbiomeenvironmental stressBank vole030104 developmental biologyHabitatsuolisto13. Climate actionympäristövaikutuksetApodemusMurinaeionizing radiation
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Symptom severity, infection progression and plant responses in solanum plants caused by three pospiviroids vary with the inoculation procedure

2021

This article belongs to the Section Molecular Plant Sciences.

0106 biological sciences0301 basic medicineViroidvirusesPospiviroidaeCEVd01 natural sciencesRibosome18S ribosomal RNAAgro-infiltrationSolanum lycopersicumBiology (General)Spectroscopyfood and beveragesGeneral MedicinePSTVdTranscriptRibosomeViroidsComputer Science Applications02.- Poner fin al hambre conseguir la seguridad alimentaria y una mejor nutrición y promover la agricultura sostenibleChemistryRNA ViralPlasmidsQH301-705.5PospiviroidaeBiologyEggplantStressArticleCatalysisTomatoMicrobiologyInorganic Chemistry03 medical and health sciencesBIOQUIMICA Y BIOLOGIA MOLECULARPhysical and Theoretical ChemistryQD1-999Molecular BiologyPotato spindle tuber viroidPlant DiseasesInoculationOrganic ChemistryfungiRibosomal RNAbiology.organism_classification030104 developmental biologyTCDVdSolanumRibosomes010606 plant biology & botany
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Induction of radiata pine somatic embryogenesis at high temperatures provokes a long-term decrease in dna methylation/hydroxymethylation and differen…

2020

Based on the hypothesis that embryo development is a crucial stage for the formation of stable epigenetic marks that could modulate the behaviour of the resulting plants, in this study, radiata pine somatic embryogenesis was induced at high temperatures (23 &deg

0106 biological sciences0301 basic medicineanimal structuresSomatic embryogenesisSomatic cellheat shock proteinPlant Scienceepigenetics; 5-hydroxymethylcytosine; 5-methylcytosine; heat; heat shock protein; memory; Pinus radiata; priming; somatic embryo; somatic plantBiology01 natural sciencesArticleTranscriptomememory03 medical and health sciencessomatic embryoMemorylcsh:BotanyHeat shock proteinEpigenetics5-hydroxymethylcytosine5-methylcytosineprimingEcology Evolution Behavior and SystematicsPinus radiataHeat shock proteinEcologyepigeneticsEmbryogenesisfungiSomatic embryofood and beveragesMethylationHeat<i>Pinus radiata</i>lcsh:QK1-989Cell biologySomatic plant030104 developmental biologysomatic plantPrimingDNA methylationEpigeneticsheat010606 plant biology & botany
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Phylogeny, biogeography, and chromosome evolution of the amphitropical genus Grindelia (Asteraceae) inferred from nuclear ribosomal and chloroplast s…

2012

0106 biological sciences0301 basic medicinebiologyBiogeographyChromosomePlant ScienceRibosomal RNAAsteraceaebiology.organism_classification010603 evolutionary biology01 natural sciences03 medical and health sciences030104 developmental biologyGrindeliaGenusPhylogeneticsEvolutionary biologyMolecular phylogeneticsEcology Evolution Behavior and SystematicsTAXON
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Shimia thalassica sp. nov., and reclassification of Pseudopelagicola gijangensis as Shimia gijangensis comb. nov., and Thalassobius activus as Cognat…

2019

Strain CECT 7735T, a marine Gram-reaction negative, aerobic, non-motile bacterium, was isolated from coastal seawater in Valencia, Spain. Strain CECT 7735T is chemoorganotrophic, mesophilic, slightly halophilic, grows at 15–28 °C but not at 4 or 37 °C, requires seawater for growth and grows up to 6 % salinity. The major cellular fatty acid is summed feature 8 (C18 : 1ω7c and/or C18 : 1ω6c). The G+C content of the genome is 55.7 mol%. Comparative analysis of the 16S rRNA gene sequence shows the strain is affiliated to the family Rhodobacteraceae , in the class Alphaproteobacteria , with highest similarities to Phaeobacter species (97.0–97.5 %), Shimia species (96.5–97.3 %) and Pseudopelagico…

0106 biological sciences0301 basic medicinebiologyPhylogenetic treeStrain (chemistry)General Medicinebiology.organism_classification16S ribosomal RNA010603 evolutionary biology01 natural sciencesMicrobiology03 medical and health sciences030104 developmental biologyMarine bacteriophageThalassobiusGenusBotanyPhaeobacterRhodobacteraceaeEcology Evolution Behavior and SystematicsInternational Journal of Systematic and Evolutionary Microbiology
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Characterization of a β-glucosidase isolated from an alpeorujo strain of Candida adriatica

2017

ABSTRACTA β-glucosidase-producing strain, Candida adriatica CECT13142, was isolated from olive oil wastes (alpeorujo) and identified by PCR/restriction fragment length polymorphism of the rDNA internal transcribed spacer and sequence analysis of the D1/D2 region of the 26S rRNA gene techniques. The enzyme was purified by sequential chromatography on DEAE-cellulose and Sephadex G-100. The relative molecular mass of the enzyme was estimated to be 50 kDa by SDS-PAGE. The hydrolytic activity of the β-glucosidase had an optimum pH of 8.2 and an optimum temperature of 40°C. The enzyme displayed high substrate specificity and high catalytic efficiency (Km 0.85 mM, Vmax 12.5 U/g of cells) for p-nit…

0106 biological sciences0301 basic medicinechemistry.chemical_classificationMolecular massStrain (chemistry)Sequence analysisRibosomal RNABiology01 natural sciencesApplied Microbiology and Biotechnology03 medical and health sciences030104 developmental biologyEnzymeBiochemistrychemistrySephadex010608 biotechnologyInternal transcribed spacerRestriction fragment length polymorphismFood ScienceBiotechnologyFood Biotechnology
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Karyotype variability and inter-population genomic differences in freshwater ostracods (Crustacea) showing geographical parthenogenesis

2018

Transitions from sexual to asexual reproduction are often associated with polyploidy and increased chromosomal plasticity in asexuals. We investigated chromosomes in the freshwater ostracod species Eucypris virens (Jurine, 1820), where sexual, asexual and mixed populations can be found. Our initial karyotyping of multiple populations from Europe and North Africa, both sexual and asexual, revealed a striking variability in chromosome numbers. This would suggest that chromosomal changes are likely to be accelerated in asexuals because the constraints of meiosis are removed. Hence, we employed comparative genomic hybridization (CGH) within and among sexual and asexual populations to get insigh…

0106 biological sciences0301 basic medicinefreshwater ostracodslcsh:QH426-470PopulationDIVERSITYcomparative genomic hybridizationPOLYPLOIDYAsexual reproductionGRASSHOPPER EYPREPOCNEMIS-PLORANSchromosome numbersB-CHROMOSOME POLYMORPHISMBiologyASEXUAL REPRODUCTION010603 evolutionary biology01 natural sciencesArticleAsexuality03 medical and health sciencesNORTH-AFRICAACRIDIDAEGeneticsCopy-number variationeducationRibosomal DNAGenetics (clinical)education.field_of_studygeographical parthenogenesisBiology and Life SciencesParthenogenesisreproductive modesDNAfreshwater ostracods; asexuality; reproductive modes; geographical parthenogenesis; comparative genomic hybridization; chromosome numbers; karyotypekaryotypeORTHOPTERAlcsh:Genetics030104 developmental biologyEvolutionary biologyEarth and Environmental SciencesPHASMATODEAPloidyasexualityComparative genomic hybridization
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Evolutionary Trends in the Mitochondrial Genome of Archaeplastida: How Does the GC Bias Affect the Transition from Water to Land?

2020

[EN] Among the most intriguing mysteries in the evolutionary biology of photosynthetic organisms are the genesis and consequences of the dramatic increase in the mitochondrial and nuclear genome sizes, together with the concomitant evolution of the three genetic compartments, particularly during the transition from water to land. To clarify the evolutionary trends in the mitochondrial genome of Archaeplastida, we analyzed the sequences from 37 complete genomes. Therefore, we utilized mitochondrial, plastidial and nuclear ribosomal DNA molecular markers on 100 species of Streptophyta for each subunit. Hierarchical models of sequence evolution were fitted to test the heterogeneity in the base…

0106 biological sciences0301 basic medicinegc biasMitochondrial DNANuclear geneBOTANICAPlant ScienceMitochondrial genomic pattern01 natural sciencesGenomeArticlegc content concomitance03 medical and health sciencesArchaeplastidaRibosomal DNAGeneEcology Evolution Behavior and SystematicsEcologybiologyArchaeplastidaStreptophytaGC biasBotanymitochondrial genomic patternEquilibrium GC frequencybiology.organism_classification030104 developmental biologyequilibrium gc frequencyEvolutionary biologyQK1-989archaeplastidaGC content concomitanceGC-content010606 plant biology & botanyPlants
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