Search results for "Specificity."

showing 10 items of 2232 documents

Specificity of mouse liver cytosolic epoxide hydrolase for K-region epoxides derived from polycyclic aromatic hydrocarbons

1980

Mouse liver cytosol epoxide hydrolase, known to be very active for certain alkene oxides, had a specific activity which was 2.1-, 11- and 160-fold lower than that of the microsomal epoxide hydrolase for the arene oxides 7-methylbenz[a]anthracene 5,6-oxide, benz[a]anthracene 5,6-oxide and phenanthrene 9,10-oxide, respectively. For benzo[a]pyrene 4,5-oxide no activity (less than 10 pmol product/mg protein/min) of cytoplasmic epoxide hydrolase was detectable. The specific activity of cytoplasmic epoxide hydrolase was much lower for all K-region epoxides investigated, compared to trans-stilbene oxide used as a positive control and for which a new assay is described. It is concluded from these r…

Epoxide HydrolasesMaleEpoxide hydrolase 2Cancer ResearchAnthracenePhenanthrenesSubstrate SpecificityMicechemistry.chemical_compoundCytosolLiverOncologychemistryBiochemistryEthers CyclicMicrosomal epoxide hydrolaseHydrolaseBenz(a)AnthracenesMicrosomes LiverMicrosomeAnimalsEpoxy CompoundsPyreneSpecific activityEpoxide hydrolaseCancer Letters
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Cysteine-Specific Radioiodination of Proteins with Fluorescein Maleimide

1997

A protocol is described for coupling of carrier-free iodine to protein sulfhydryl groups via fluorescein maleimide. 125I is first coupled to fluorescein maleimide in the presence of chloramine T. Iodination is stopped with sodium thiosulfate, and the iodine-substituted fluorescein maleimide is reacted with free cysteines of the protein. Excess label is then removed by gel-permeation chromatography. The procedure avoids exposition of the protein to oxidative conditions and does not require purification of the labeled carrier reagent. Suitability of the method for a given protein can be evaluated spectrophotometrically without employing radioactivity. It can be applied under denaturing condit…

ErythrocytesPolymersThiosulfatesBiophysicsPlasma protein bindingSodium thiosulfateComplement Hemolytic Activity AssaySensitivity and SpecificityBiochemistryIodine RadioisotopesTosyl Compoundschemistry.chemical_compoundBacterial ProteinsCysteineFluoresceinMolecular BiologyChloramineChromatographyChloraminesProteinsHalogenationCell BiologyFluoresceinsBiochemistrychemistrySpectrophotometryReagentStreptolysinsChromatography GelStreptolysinProtein BindingCysteineAnalytical Biochemistry
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Enzymes involved in the dynamic equilibrium of core histone acetylation ofPhysarum polycephalum

1992

DEAE-Scpharose chromatography of extracts from plasmodia of the myxomyccte PI~.~suru~~t ,~/.~crpl~~ho~~ revealed the presence of multiple histone acetyltransferases and histonc deacctylascs. A cyloplasmic histonc acctyltransferase B, specific for histonc H4, and two nuclear acetyltransferases Al and A2 were identilied; Al acetylates all core hislones with a preference for l-13 and H2A. whereas A2 is specific for H3 and also slightly for H2B. Two hislone deacetylases. HDI and HD2, could be discriminated. They differ with respect to subslralc speciliciiy and pH dependence. For the first time the substrate specificity of histonc deacetylascs was determined using HPLC-purilicd individual core h…

ErythrocytesSaccharomyces cerevisiae ProteinsBiophysicsBiochemistryHistone DeacetylasesSubstrate SpecificityHistonesPhysarumHistone H1AcetyltransferasesPhysarum polycephalumStructural BiologyHistone H2AGeneticsAnimalsHistone deacetylaseHistone octamerMolecular BiologyChromatography High Pressure LiquidHistone AcetyltransferasesHistone AcetyltransferasesbiologyHistone deacetylase 2AcetylationButyrateCell BiologyHistone acetyltransferaseMolecular biologyChromatinHistone Deacetylase InhibitorsIsoenzymesButyratesKineticsHistone acetylationBiochemistryHistone methyltransferasebiology.proteinButyric AcidHistone acetyltransferaseHistone deacetylaseChickensProtein Processing Post-TranslationalFEBS Letters
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Phosphotransferase properties of human erythrocyte phosphoglycolate phosphatase.

1982

Abstract 1. 1. Human erythrocyte phosphoglycolate phosphatase (PGP) (EC 3.1.3.18) shows transferase properties. Using p -nitrophenylphosphate ( p -NPP) as substrate, methanol, at a concentration of 4.9 M. was the most efficient phosphate acceptor tested (60% phosphate transfer). 2. 2. The branched alcohols i -propanol and i -butanol accept the phosphate better than the unbranched compounds. The acceptor potency is methanol > ethanol > i -propanol > n -propanol > i -butanol > n -butanol. 3. 3. The relative transferase activity could be demonstrated to be independent of substrate concentration, pH. and the inhibitory effect of NaF at 2 and 4 mM. 4. 4. POP shows no transferase activity towards…

ErythrocytesStereochemistryButanolMethanolPhosphotransferasesFructosePhosphateBiochemistryPhosphoric Monoester HydrolasesLactic acidSubstrate SpecificityPhosphotransferasePropanolNitrophenolschemistry.chemical_compoundOrganophosphorus CompoundschemistryBiochemistryAlcoholsTransferaseHumansPhosphoglycolate phosphataseThe International journal of biochemistry
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Digestive vacuoles of Plasmodium falciparum are selectively phagocytosed by and impair killing function of polymorphonuclear leukocytes.

2011

AbstractSequestration of parasitized erythrocytes and dysregulation of the coagulation and complement system are hallmarks of severe Plasmodium falciparum malaria. A link between these events emerged through the discovery that the parasite digestive vacuole (DV), which is released together with infective merozoites into the bloodstream, dually activates the intrinsic clotting and alternative complement pathway. Complement attack occurs exclusively on the membrane of the DVs, and the question followed whether DVs might be marked for uptake by polymorphonuclear granulocytes (PMNs). We report that DVs are indeed rapidly phagocytosed by PMNs after schizont rupture in active human serum. Uptake …

ErythrocytesTime FactorsNeutrophilsPhagocytosisImmunologyPlasmodium falciparumVacuoleBiologyBiochemistryModels BiologicalMicrobiologySubstrate SpecificityPhagocytosisAnimalsHumansMalaria FalciparumOpsoninchemistry.chemical_classificationReactive oxygen speciesCell DeathMerozoitesPlasmodium falciparumCell BiologyHematologybiology.organism_classificationComplement systemRespiratory burstBlood Cell CountchemistryImmunologyVacuolesAlternative complement pathwayReactive Oxygen SpeciesBlood
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Taking Advantage of Selective Change Driven Processing for 3D Scanning

2013

This article deals with the application of the principles of SCD (Selective Change Driven) vision to 3D laser scanning. Two experimental sets have been implemented: one with a classical CMOS (Complementary Metal-Oxide Semiconductor) sensor, and the other one with a recently developed CMOS SCD sensor for comparative purposes, both using the technique known as Active Triangulation. An SCD sensor only delivers the pixels that have changed most, ordered by the magnitude of their change since their last readout. The 3D scanning method is based on the systematic search through the entire image to detect pixels that exceed a certain threshold, showing the SCD approach to be ideal for this applicat…

Event-based visionLaser scanningComputer scienceTransducers3d scanninglcsh:Chemical technologySensitivity and SpecificityBiochemistryArticleAnalytical Chemistrylaw.inventionPhotometryPhotometry (optics)Imaging Three-DimensionallawInformàticaNyquist–Shannon sampling theoremComputer visionlcsh:TP1-11853D scanningElectrical and Electronic Engineeringhigh-speed visual acquisitionInstrumentationPixelbusiness.industryLasers3D reconstructionReproducibility of ResultsSignal Processing Computer-AssistedEquipment DesignImage EnhancementLaserAtomic and Molecular Physics and OpticsEquipment Failure AnalysisTransducerSemiconductorsCMOSArtificial intelligencebusinessHigh-speed visual acquisitionevent-based visionSensors
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On the complexity of the Saccharomyces bayanus taxon: Hybridization and potential hybrid speciation

2014

Although the genus Saccharomyces has been thoroughly studied, some species in the genus has not yet been accurately resolved; an example is S. bayanus, a taxon that includes genetically diverse lineages of pure and hybrid strains. This diversity makes the assignation and classification of strains belonging to this species unclear and controversial. They have been subdivided by some authors into two varieties (bayanus and uvarum), which have been raised to the species level by others. In this work, we evaluate the complexity of 46 different strains included in the S. bayanus taxon by means of PCR-RFLP analysis and by sequencing of 34 gene regions and one mitochondrial gene. Using the sequenc…

Evolutionary GeneticsSaccharomyces bayanusDIVERSITYSequence Homologylcsh:MedicineSaccharomycesPolymerase Chain Reaction//purl.org/becyt/ford/1 [https]Genética y HerenciaPCR-RFLP analysisFungal EvolutionCluster Analysislcsh:ScienceGenome EvolutionPhylogenyGeneticsMultidisciplinarySACCHAROMYCES EUBAYANUSPhylogenetic analysisbiologyStrain (biology)Systems BiologyGenomicsS. bayanusPolymorphism Restriction Fragment LengthCIENCIAS NATURALES Y EXACTASResearch ArticleEvolutionary ProcessesGenetic SpeciationMolecular Sequence DataIntrogressionMycologyGenome ComplexityMicrobiologyGenètica molecularCiencias BiológicasSaccharomycesSpecies SpecificityPhylogeneticsGenetic variationGeneticsYEAST//purl.org/becyt/ford/1.6 [https]HybridizationAllelesHybridEvolutionary BiologyBase Sequencelcsh:ROrganismsFungiBiology and Life SciencesComputational BiologyGenetic VariationSACCHAROMYCES PASTORIANUSSequence Analysis DNAComparative Genomicsbiology.organism_classificationYeastGenetics PopulationHaplotypesFungal ClassificationHybridization GeneticHybrid speciationlcsh:Q
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Chemical Cues Influence Pupation Behavior of Drosophila simulans and Drosophila buzzatii in Nature and in the Laboratory.

2012

International audience; In the wild, larvae of several species of Drosophila develop in heterogeneous and rapidly changing environments sharing resources as food and space. In this scenario, sensory systems contribute to detect, localize and recognize congeners and heterospecifics, and provide information about the availability of food and chemical features of environments where animals live. We investigated the behavior of D. simulans and D. buzzatii larvae to chemicals emitted by conspecific and heterospecific larvae. Our goal was to understand the role of these substances in the selection of pupation sites in the two species that cohabit within decaying prickly pear fruits (Opuntia ficus…

Evolutionary Genetics[ SDV.AEN ] Life Sciences [q-bio]/Food and Nutritionlcsh:Medicinepheromone;larva;adaptation;field studyBiochemistryBehavioral Ecologyadaptation au milieuDrosophila buzzatiilcsh:ScienceLarvaMultidisciplinaryBehavior AnimalEcologyAnimal BehaviorbiologyEcologyPupalarvePupaChemistryLarvaAlimentation et NutritionPheromoneDrosophilaResearch Articleanimal structuresdomaine de rechercheEnvironmentModels BiologicalSpecies SpecificityChemical Biologyparasitic diseasesGeneticsAnimalsFood and NutritionphéromoneBiologyDrosophilaEvolutionary BiologyPopulation Biologylcsh:Rfungibiology.organism_classificationEvolutionary EcologyFruitOdorantsPerceptionlcsh:QAdaptationZoologyEntomology[SDV.AEN]Life Sciences [q-bio]/Food and NutritionNeuroscienceDrosophila larvae
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Neutral deoxyribonucleases of HeLa S3 cells: electrophoretic separation, characterization, substrate specificity and mode of action.

1980

Extracts of HeLa S3 cells were electrophoresed on polyacrylamide gels; gel slices were eluted and the eluates were assayed for DNase activities against native and denatured DNA substrates in the presence of MgCl2 or Na2EDTA. Aliquots of each eluate were also assayed for their ability to nick the circular supercoiled PM2 phage DNA to distinguish endonucleases from exonucleases. Peaks of endonuclease activities were characterized as forming 3′-phospho-oligonucleotides or 5′-phospho-oligonucleotides by the use of oligonucleotides produced by these enzymes as substrates for the 5′-phosphate-specific snake venom exonuclease. The total activity of DNases in gel eluates was much higher than that i…

ExonucleasePolyacrylamideDNA Single-StrandedBiochemistrySubstrate SpecificityEndonucleasechemistry.chemical_compoundHumansMagnesiumEdetic Acidchemistry.chemical_classificationChromatographyDeoxyribonucleasesbiologyOligonucleotideHydrogen-Ion ConcentrationElectrophoresisEnzymeBiochemistrychemistryDNA Viralbiology.proteinElectrophoresis Polyacrylamide GelDNA CircularDeoxyribonucleasesDNAHeLa CellsEuropean journal of biochemistry
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Extrapolation of water and formaldehyde harmonic and anharmonic frequencies to the B3LYP/CBS limit using polarization consistent basis sets

2010

The harmonic and anharmonic frequencies of fundamental vibrations in formaldehyde and water were successfully estimated using the B3LYP Kohn-Sham limit. The results obtained with polarization- and correlation-consistent basis sets were fitted with a two-parameter formula. Anharmonic corrections were obtained by a second order perturbation treatment (PT2). We compared the performance of the PT2 scheme on the two title molecules using SCF, MP2 and DFT (BLYP, B3LYP, PBE and B3PW91 functionals) methods combined with polarization consistent pc-n (n = 0, 1, 2, 3, 4) basis sets, Dunning’s basis sets (aug)-cc-pVXZ where X = D, T, Q, 5, 6 and Pople’s basis sets up to 6-311++G(3df,2pd). The influence…

ExtrapolationPerturbation (astronomy)Sensitivity and SpecificityVibrationMolecular physicsCatalysisInorganic ChemistryRoot mean squareFormaldehydeQuantum mechanicsWavenumberIR and Raman theoretical spectraPhysics::Chemical PhysicsPhysical and Theoretical ChemistryBasis setOriginal PaperChemistrySpectrum AnalysisOrganic ChemistryAnharmonicityHarmonicReproducibility of ResultsWaterComplete basis set limitModels TheoreticalPolarization (waves)Computer Science ApplicationsVibrationComputational Theory and MathematicsAnharmonicJournal of Molecular Modeling
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