Search results for "Specificity."

showing 10 items of 2232 documents

The evolution of substrate differentiation inMinuartiaseriesLaricifoliae(Caryophyllaceae) in the European Alps: In situ origin or repeated colonizati…

2013

Premise of the study Substrate specialization is often considered an important factor in evolutionary diversification. A classic example of divergence related to different substrate types is the dichotomy between calcicole and calcifuge plants on calcareous and siliceous substrates as found in the European Alps. When closely related species with contrasting substrate preferences are found in the same area, it is generally hypothesized that they diverged where they now occur. However, it is possible that Alpine edaphic diversity instead allows the coexistence of related species whose edaphic differentiation took place deeper in the phylogeny, in some other part of the range of their clades. …

Genetic SpeciationRange (biology)CalcicoleCaryophyllaceaePlant ScienceBiologyCalcifugeSoilSpecies SpecificityGeneticsEndemismEcosystemPhylogenyEcology Evolution Behavior and SystematicsBase SequenceGeographyEcologyEdaphicBiodiversitySequence Analysis DNAbiology.organism_classificationAdaptation PhysiologicalBiological EvolutionSubstrate (marine biology)EuropeTaxonMinuartiaDNA IntergenicAmerican Journal of Botany
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Baculoviral display of functional scFv and synthetic IgG-binding domains.

2000

Viral vectors displaying specific ligand binding moities such as scFv fragments or intact antibodies hold promise for the development of targeted gene therapy vectors. In this report we describe baculoviral vectors displaying either functional scFv fragments or the synthetic Z/ZZ IgG binding domain derived from protein A. Display on the baculovirus surface was achieved via fusion of the scFv fragment or Z/ZZ domain to the N-terminus of gp64, the major envelope protein of the Autographa californica nuclear polyhedrosis virus, AcNPV. As examples of scFv fragments we have used a murine scFv specific for the hapten 2-phenyloxazolone and a human scFv specific for carcinoembryonic antigen. In pri…

Genetic enhancementvirusesRecombinant Fusion ProteinsBlotting WesternBiophysicschemical and pharmacologic phenomenaEnzyme-Linked Immunosorbent AssayVectors in gene therapySpodopteraBiochemistryViral vector03 medical and health sciencesMice0302 clinical medicineAntibody SpecificityPeptide LibraryAnimalsHumansMolecular BiologyImmunoglobulin FragmentsCells Cultured030304 developmental biology0303 health sciencesbiologyOxazoloneNuclear Polyhedrosis VirusCell Biologyrespiratory systembiology.organism_classificationMolecular biology3. Good healthCarcinoembryonic AntigenAutographa californicaIgG binding030220 oncology & carcinogenesisImmunoglobulin Gbiology.proteinBinding Sites AntibodyAntibodyHaptenBaculoviridaeHaptensViral Fusion ProteinsBiochemical and biophysical research communications
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Liver-specific overexpression of matrix metalloproteinase 9 (MMP-9) in transgenic mice accelerates development of hepatocellular carcinoma.

2010

Matrix metalloproteinase-9 (MMP-9) plays a central role in tumor invasion and development of metastases. Expression of MMP-9 had been shown in human hepatocellular carcinomas (HCCs). However, it remained unclear whether MMP-9 could influence development of HCC. In order to address this issue, we generated transgenic mice overexpressing MMP-9 in the liver. In order to avoid embryonic lethality a Cre-lox system was utilized for conditional overexpression of MMP-9 under control of an albumin enhancer and promoter. Induction of MMP-9 overexpression in transgenic mice was achieved by i.v. injection of an adenovirus coding for the Cre recombinase. Initiation of liver carcinogenesis was achieved b…

Genetically modified mouseCancer ResearchLiver tumorTransgeneGenetic VectorsCre recombinaseGene ExpressionMice TransgenicBiologymedicine.disease_causeMiceLiver Neoplasms ExperimentalIn vivoGene OrdermedicineAnimalsHomeostasisHumansHomologous RecombinationMolecular BiologyIntegrasesHCCSmedicine.diseaseMolecular biologyCell Transformation NeoplasticPhenotypeLiverMatrix Metalloproteinase 9Organ SpecificityHepatocellular carcinomaCarcinogenesisMolecular carcinogenesis
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Heart-targeted overexpression of caspase3 in mice increases infarct size and depresses cardiac function

2001

Up-regulation of proapoptotic genes has been reported in heart failure and myocardial infarction. To determine whether caspase genes can affect cardiac function, a transgenic mouse was generated. Cardiac tissue-specific overexpression of the proapoptotic gene Caspase3 was induced by using the rat promoter of α-myosin heavy chain, a model that may represent a unique tool for investigating new molecules and antiapoptotic therapeutic strategies. Cardiac-specific Caspase3 expression induced transient depression of cardiac function and abnormal nuclear and myofibrillar ultrastructural damage. When subjected to myocardial ischemia–reperfusion injury, Caspase3 transgenic mice showed increased inf…

Genetically modified mouseCardiac function curveDNA ComplementaryTransgeneRecombinant Fusion ProteinsMyocardial InfarctionMyocardial IschemiaCaspase 3ApoptosisMice TransgenicMyocardial Reperfusion InjuryDNA FragmentationContractilityMiceVentricular Dysfunction LeftmedicineAnimalsHumansGenetic Predisposition to DiseaseMyocardial infarctionCaspaseMultidisciplinarybiologyCaspase 3MyocardiumBiological Sciencesmedicine.diseasePhenotypeGene Expression RegulationEchocardiographyOrgan SpecificityHeart failureCaspasesCancer researchbiology.proteincardiovascular system
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A variable intron distribution in globin genes of Chironomus: evidence for recent intron gain

1998

The intron positions found in globin genes of plants, protozoa and invertebrates have been interpreted as evidence for a three-intron-four-exon structure of the ancestral globin gene. In particular, the so-called 'central' introns, which are not found in vertebrate globin genes but are present in a variety of invertebrate and plant species, have been used as an argument for an ancestral gene structure featuring three introns. We have analyzed the presence or absence of central introns in the Gb genes 2beta, 9 and 7A of various European and Australasian species of the insect Chironomus. We find unrelated central introns at different positions in some of the species investigated, while other …

GeneticsBase SequencebiologyMolecular Sequence DataGene ConversionIntronVertebrateExonsGeneral MedicineGroup II intronbiology.organism_classificationChironomidaeIntronsGlobinsEvolution MolecularExonSpecies SpecificityMolecular evolutionSequence Homology Nucleic Acidbiology.animalGeneticsAnimalsChironomusGene conversionGeneGene
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Larval morphology, genetic divergence, and contrasting levels of host manipulation between forms of Pomphorhynchus laevis (Acanthocephala)

2004

Studies on parasite species with a wide geographic and ecological range may be confounded by still equivocal taxonomic identification. Here, we investigated genetic polymorphism and behavioural changes induced in a common intermediate host, in two different forms of Pomphorhynchus laevis based on the morphology of the larval infective stage (cystacanth). A 'smooth type' (S) and a 'wrinkled type' (W) of cystacanth were distinguished based on their surface and shape. We analysed sequence divergence at both nuclear (ribosomal gene 18S rDNA, and ribosomal internal transcribed spacers, ITS1/ITS2) and mitochondrial (cytochrome c oxidase subunit 1) genes of P. laevis cystacanths and adults at vari…

GeneticsBase SequencebiologyMolecular Sequence DataIntermediate hostRibosomal RNAbiology.organism_classificationAcanthocephalaHost-Parasite InteractionsEvolution MolecularGenetic divergenceGammarus pulexInfectious DiseasesSpecies SpecificityEvolutionary biologyLarvabiology.proteinAnimalsCytochrome c oxidaseParasitologyPomphorhynchus laevisAcanthocephalaSequence AlignmentRibosomal DNAGenes HelminthInternational Journal for Parasitology
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Forensic validation of the SNPforID 52-plex assay.

2007

The advantages of single nucleotide polymorphism (SNP) typing in forensic genetics are well known and include a wider choice of high-throughput typing platforms, lower mutation rates, and improved analysis of degraded samples. However, if SNPs are to become a realistic supplement to current short tandem repeat (STR) typing methods, they must be shown to successfully and reliably analyse the challenging samples commonly encountered in casework situations. The European SNPforID consortium, supported by the EU GROWTH programme, has developed a multiplex of 52 SNPs for forensic analysis, with the amplification of all 52 loci in a single reaction followed by two single base extension (SBE) react…

GeneticsForensic GeneticsAnalysis of VarianceGenotypeDNABiologySingle-base extensionDNA FingerprintingPolymorphism Single NucleotideSensitivity and SpecificityPathology and Forensic MedicineEuropeDNA profilingSTR analysisGeneticsMicrosatelliteHumansMultiplexTypingCooperative BehaviorLow copy numberLaboratoriesAllelesSNP arrayMicrosatellite RepeatsForensic science international. Genetics
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A genome-wide view of Caenorhabditis elegans base-substitution mutation processes

2009

Knowledge of mutation processes is central to understanding virtually all evolutionary phenomena and the underlying nature of genetic disorders and cancers. However, the limitations of standard molecular mutation detection methods have historically precluded a genome-wide understanding of mutation rates and spectra in the nuclear genomes of multicellular organisms. We applied two high-throughput DNA sequencing technologies to identify and characterize hundreds of spontaneously arising base-substitution mutations in 10 Caenorhabditis elegans mutation-accumulation (MA)-line nuclear genomes. C. elegans mutation rate estimates were similar to previous calculations based on smaller numbers of m…

GeneticsGenome HelminthMutation rateMultidisciplinaryPoint mutationGenetic VariationHelminth geneticsSequence Analysis DNABiological SciencesDNA HelminthBiologyMutation AccumulationBackground selectionPolymorphism Single NucleotideGenomeGenètica molecularGenetic hitchhikingSpecies SpecificityMutation (genetic algorithm)AnimalsPoint MutationCaenorhabditis elegansGenome-Wide Association Study
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Subrepeats result from regional DNA sequence conservation in tandem repeats in Chironomus telomeres

1990

Repeat units, widespread in eukaryotic genomes, are often partially or entirely built up of subrepeats. Homogenization between whole repeat units arranged in tandem usually can best be understood as a result of unequal crossing over. Such a mechanism is less plausible for maintaining similarities between subrepeats within a repeat unit when present in a regular array. In Chironomus telomeres, large blocks of tandemly repeated approximately 350 base-pair units contain two or three pairs of subrepeats with high mutual identities, embedded in linker DNA, non-repetitive within the repeat unit. Measurements of evolutionary base changes in two closely related species, Chironomus tentans and Chiro…

GeneticsGenomic LibraryUnequal crossing overBase SequencebiologyMolecular Sequence DataGene AmplificationDNAbiology.organism_classificationBiological EvolutionGenomeLinker DNAChironomidaeDNA sequencingSpecies SpecificityTandem repeatStructural BiologyMolecular evolutionSequence Homology Nucleic AcidAnimalsChironomusMolecular BiologyRepetitive Sequences Nucleic AcidRepeat unitJournal of Molecular Biology
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Unmasking frequency-dependent selection in tri-cultures of Drosophila melanogaster.

1989

Larval-to-adult viability was measured for three strains of Drosophila melanogaster: a wild strain and two eye colour mutant strains (cardinal and sepia) starting from seventy different genotypic compositions. Analyses of a sub-set of the data (not considering all genotypic frequencies) demonstrate frequency-dependence in the three strains. These results suggest that in this experiment, frequency-dependent selection may be masked by other selective forces, only being apparent when specific analyses are carried out.

GeneticsGenotypeFrequency-dependent selectionMutantPopulation geneticsPlant ScienceGeneral MedicineBiologybiology.organism_classificationDrosophila melanogasterGene FrequencySpecies SpecificityInsect ScienceDrosophilidaeLarvaGenotypeMutationGeneticsAnimalsRegression AnalysisAnimal Science and ZoologySepiaDrosophila melanogasterSelection GeneticAllele frequencyGenetica
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