Search results for "Spectroscopy"

showing 10 items of 10293 documents

4,5,6,7-Tetrahydro-isoxazolo-[4,5-c]-pyridines as a new class of cytotoxic Hsp90 inhibitors.

2014

Hsp90 is considered an interesting therapeutic target for anticancer drug development. Here we describe a new class of 4,5,6,7-tetrahydro-isoxazolo-[4,5-c]-pyridine compounds. A small library of derivatives has been synthesized and investigated. Some reported compounds show interesting properties combining both notable binding to Hsp90 and potent cell growth inhibitory activity. N-5 substitution with a 2,4 resorcinol carboxamide appears crucial for activity. Moreover, a derivative bearing a hydroxamic acid residue bound to C-3 amide portion was found to inhibit both Hsp90 and HDAC6.

Spectrometry Mass Electrospray IonizationMagnetic Resonance Spectroscopymedicine.drug_classStereochemistryPyridinesCarboxamideApoptosisResorcinolAnti-cancer drugschemistry.chemical_compoundResidue (chemistry)AmideDrug DiscoveryHeat shock protein 90 Anti-cancer drugs 4567-Tetrahydro-isoxazolo-[45-c]- pyridinesmedicineCytotoxic T cellHumansHeat shock protein 90HSP90 Heat-Shock ProteinsPharmacologyHydroxamic acidChemistryCell growthOrganic ChemistryGeneral MedicineNuclear magnetic resonance spectroscopy4 5 6 7-Tetrahydro-isoxazolo-[4 5-c]-pyridinesFlow CytometrySettore CHIM/08 - Chimica Farmaceuticahsp90Settore BIO/14 - Farmacologia4 5 6 7-Tetrahydro-isoxazolo-[4 5-c]-pyridines; Anti-cancer drugs; Heat shock protein 90;K562 CellsCell DivisionEuropean journal of medicinal chemistry
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Chemoenzymatic Synthesis of Functional Sialyl LewisX Mimetics with a Heteroaromatic Core

2014

Functional mimetics of the sialyl Lewis(X) tetrasaccharide were prepared by the enzymatic sialylation of a 1,3-diglycosylated indole and a glycosyl azide, which was subsequently transformed into a 1,4-diglycosylated 1,2,3-triazole, by using the trans-sialidase of Trypanosoma cruzi. These compounds inhibited the binding of E-, L-, and P-selectin-coated nanoparticles to polyacrylamide-bound sialyl-Lewis(X) -containing neighboring sulfated tyrosine residues (sTyr/sLe(X) -PAA) at low or sub-millimolar concentrations. Except for E-selectin, the mimetics showed higher activities than the natural tetrasaccharide.

Spectrometry Mass Electrospray IonizationStereochemistryProton Magnetic Resonance SpectroscopyTrypanosoma cruziMolecular Sequence DataNeuraminidaseOligosaccharidessaccharide mimeticsBiochemistryenzyme catalysisEnzyme catalysischemistry.chemical_compoundSulfationTetrasaccharideAnimalsGlycosylTyrosineCarbon-13 Magnetic Resonance SpectroscopySialyl Lewis X AntigenGlycoproteinsIndole testheterocyclesOrganic ChemistryMolecular Mimicrycell adhesionGeneral ChemistryFull Paperscarbohydrates (lipids)Sialyl-Lewis XchemistryCarbohydrate SequenceSelectinsAzideChemistry, an Asian Journal
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Entrapment of amino acids in gas phase surfactant assemblies: The case of tryptophan confined in positively charged (1R,2S)-dodecyl (2-hydroxy-1-meth…

2017

The ability of positively charged aggregates of the surfactant (1R,2S)‐dodecyl (2‐hydroxy‐1‐methyl‐2‐phenylethyl))dimethylammonium bromide (DMEB) to incorporate D-tryptophan or L-tryptophan in the gas phase has been investigated by electrospray ion mobility mass spectrometry (ESI‐IM‐MS). Strongly impacted by the pH of the electrosprayed solutions, both protonated (T+) and deprotonated (T-) tryptophan are effectively included into the aggregates, whereas, tryptophan in zwitterionic (T0) form is practically absent in singly charged DMEB aggregates but can be found in multiply charged ones. The ability to incorporate tryptophan increases with the aggregation number and charge state of aggr…

Spectrometry Mass Electrospray IonizationSurfactant aggregateCollision-induced dissociationIon mobilityMolecular ConformationProtonationRandom hexamerGas-phase self-assembly010402 general chemistryPhotochemistry01 natural sciencesGas‐phase self‐assemblychemistry.chemical_compoundSurface-Active AgentsDeprotonationBromideCationsOrganic chemistryMoietyDMEBSpectroscopyAggregation number010401 analytical chemistryTryptophanTryptophanStereoisomerism0104 chemical sciencesQuaternary Ammonium CompoundschemistryGasesJournal of mass spectrometry : JMS
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LC–ESI–FT–MSn Metabolite Profiling of Symphytum officinale L. Roots Leads to Isolation of Comfreyn A, an Unusual Arylnaphthalene Lignan

2020

Preparations of comfrey (Symphytum officinale L.) roots are used topically to reduce inflammation. Comfrey anti-inflammatory and analgesic properties have been proven in clinical studies. However, the bioactive compounds associated with these therapeutic activities are yet to be identified. An LC&ndash

Spectrometry Mass Electrospray Ionizationcomfrey rootsMetaboliteAnti-Inflammatory AgentsComfreySymphytum officinalePlant Roots01 natural sciencescomfreyn AArticleCatalysisUmbilical veinInorganic Chemistrylcsh:Chemistrychemistry.chemical_compoundLC–ESI–Orbitrap–MSComfreyHuman Umbilical Vein Endothelial CellsSymphytum officinaleHumans<i>Symphytum officinale</i>Physical and Theoretical ChemistryGloboidnan AMolecular Biologylcsh:QH301-705.5SpectroscopyLignanPlants MedicinalChromatographyMolecular StructurebiologyChemistry010401 analytical chemistryOrganic ChemistryComfrey roots; Comfreyn A; LC–ESI–Orbitrap–MS; Phenylpropanoids; Symphytum officinaleGeneral Medicinebiology.organism_classification0104 chemical sciencesComputer Science Applications010404 medicinal & biomolecular chemistrylcsh:Biology (General)lcsh:QD1-999Metabolite profilingTwo-dimensional nuclear magnetic resonance spectroscopyChromatography LiquidphenylpropanoidsInternational Journal of Molecular Sciences
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Infrared Difference Spectroscopy of Proteins: From Bands to Bonds

2020

Infrared difference spectroscopy probes vibrational changes of proteins upon their perturbation. Compared with other spectroscopic methods, it stands out by its sensitivity to the protonation state, H-bonding, and the conformation of different groups in proteins, including the peptide backbone, amino acid side chains, internal water molecules, or cofactors. In particular, the detection of protonation and H-bonding changes in a time-resolved manner, not easily obtained by other techniques, is one of the most successful applications of IR difference spectroscopy. The present review deals with the use of perturbations designed to specifically change the protein between two (or more) functional…

Spectrophotometry Infrared010405 organic chemistryInfraredChemistryMembrane ProteinsWaterHydrogen BondingProtonationGeneral ChemistryNanosecond010402 general chemistryVibration01 natural sciences0104 chemical sciencesIsotopic labelingChemical physicsMutagenesis Site-DirectedSide chainAnimalsHumansMoleculeAmino AcidsSpectroscopyRotational–vibrational couplingChemical Reviews
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Rapid determination of baicalin and total baicalein content in Scutellariae radix by ATR-IR and NIR spectroscopy

2013

In this study methods for the quantification of baicalin and total baicalein in Scutellariae radix with near infrared (NIR) spectroscopy and attenuated-total-reflectance mid-infrared (ATR-IR) spectroscopy in hyphenation with multivariate analysis were developed and compared. The reference analysis was performed by high performance liquid chromatography coupled to diode array detection (HPLC-DAD). Different pretreatments like standard normal variate (SNV), multiplicative scatter correction (MSC), first and second derivative Savitzky-Golay were applied on the spectra to optimize the calibrations. A principal component analysis was performed with both spectroscopic methods to distinguish wild …

Spectrophotometry InfraredATR-IRAnalytical chemistryPlant RootsHigh-performance liquid chromatographyArticleAnalytical Chemistrychemistry.chemical_compoundScutellariae radixScutellariae radixBaicalinLeast-Squares AnalysisSpectroscopySecond derivativeFlavonoidsPrincipal Component AnalysisChromatographybiologyNear-infrared spectroscopyNIRBaicaleinbiology.organism_classificationBaicaleinchemistryFlavanonesScutellaria baicalensisBaicalinScutellaria baicalensisTalanta
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Gas phase infrared multiple photon dissociation spectra of positively charged sodium bis(2-ethylhexyl)sulfosuccinate reverse micelle-like aggregates

2011

The capability of infrared multiple photon dissociation (IRMPD) spectroscopy to gain structural information on surfactant-based supramolecular aggregates has been exploited to elucidate intermolecular interactions and local organization of positively charged sodium bis(2-ethylhexyl)sulfosuccinate (AOTNa) aggregates in the gas phase. A detailed analysis of the stretching modes of the AOTNa CO and SO(3)(-) head groups allows one to directly probe their interactions with sodium counterions and to gain insight in their organization within the aggregate. Similarities and differences of the IRMPD spectra as compared to the infrared absorption spectrum of micellized AOTNa in CCl(4) have been analy…

Spectrophotometry InfraredAnalytical chemistryInfrared spectroscopy010402 general chemistryPhotochemistry01 natural sciencesMicelleDissociation (chemistry)Fragmentation (mass spectrometry)IRMPD gas phase AOTMaterials ChemistryMoleculeInfrared multiphoton dissociationPhysical and Theoretical ChemistryMicellesSettore CHIM/02 - Chimica Fisicachemistry.chemical_classificationDioctyl Sulfosuccinic AcidPhotonsChemistryLasers010401 analytical chemistryIntermolecular force0104 chemical sciencesSurfaces Coatings and FilmsGasesCounterionThe journal of Physical Chemistry. B
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Metal complexes of the carbonic anhydrase inhibitor methazolamide (Hmacm). Crystal structure of the Zn(macm)2 (NH3)2. Anticonvulsant properties of th…

1995

Complexes of Co(II), Cu(II), and Zn(II) with deprotonated methazolamide and ammonia are synthesized and characterized. The complex Zn(macm)2(NH3)2 crystallizes in the monoclinic C2/c space group with a = 13.468(1), b = 6.759(1), c = 23.014(2) A, beta = 90.27(1), and Z = 4. The structure was refined to R = 0.049 (Rw = 0.053). The Zn(II) ion is coordinated to two deprotonated sulfonamido nitrogen atoms of the macm- ligand and two nitrogen atoms of the ammonia ligands in a distorted tetrahedron. The Zn(macm)2(NH3)2 complex is shown to be a simple model for the methazolamide inhibition of CA. EHMO calculations applied to fractional coordinates of the Zn(macm)2(NH3)2 complex indicate that the at…

Spectrophotometry InfraredCations DivalentInorganic chemistryMethazolamidechemistry.chemical_elementCrystal structureZincCrystallography X-RayBiochemistryInorganic ChemistryMetalDeprotonationmedicineAnimalsMethazolamideHOMO/LUMOMolecular StructureChemistryLigandElectron Spin Resonance SpectroscopyCobaltZincCrystallographyvisual_artvisual_art.visual_art_mediumAnticonvulsantsCoppermedicine.drugMonoclinic crystal systemJournal of Inorganic Biochemistry
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Theoretical calculation of the vibrational spectra of cis-cis-cyclooctadienes in the vapour phase.

2000

The theoretical infrared spectra of 1,3-cis-cis-cyclooctadiene (1,3-COD) and 1,5-cis-cis-cyclooctadiene (1,5-COD), were obtained by ab initio MO calculations at Hartree-Fock level. The results were compared with the available IR experimental spectra of 1,3- and 1,5-COD. The apparent agreement between theoretical and experimental data allows us to exploit two bands, found only in the case of the theoretical spectrum of 1,4-COD, as a tool for identifying 1,4-COD during its synthesis.

Spectrophotometry InfraredChemistryAnalytical chemistryAb initioInfrared spectroscopyCycloparaffinsAtomic and Molecular Physics and OpticsSpectral lineAnalytical ChemistryCyclooctanesModels ChemicalPhase (matter)Physical chemistryInstrumentationSpectroscopyVibrational spectraSpectrochimica acta. Part A, Molecular and biomolecular spectroscopy
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Isolated glyoxylic acid-water 1:1 complexes in low temperature argon matrices

2015

Abstract The 1:1 hydrogen bonded complexes between glyoxylic acid (GA) and water are studied in low temperature argon matrices. Four different complex structures were found in deposited matrices. The lowest energy conformer (T1) of GA was found to form complex, where the water molecule was attached to the opposite side of the intramolecular hydrogen bond in the molecule (T1B). Interestingly, this complex was estimated to be +8.0 kJ mol −1 higher in energy than the most stable structure (T1A), where the water is inserted into the internal hydrogen bond, and also found in solid argon but in smaller abundance. For the second-lowest energy conformer of GA (T2), the two lowest-energy complex str…

Spectrophotometry InfraredHydrogenMolecular Conformationconformerschemistry.chemical_elementVibrationkonformeeritAnalytical Chemistrychemistry.chemical_compoundIsomerismComputational chemistryglyoxylic acidMoleculematriisi isolaatioArgonvärähdysspektroskopiaInstrumentationConformational isomerismta116SpectroscopyGlyoxylic acidhydrogen bondArgonglyoksyylihappoHydrogen bondMatrix isolationGlyoxylatesWatermatrix isolationHydrogen Bondinglaskennallinen kemiacomputational chemistryAtomic and Molecular Physics and OpticsCold TemperatureCrystallographychemistryIntramolecular forcevetysidosSpectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy
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