Search results for "Sponge"

showing 10 items of 296 documents

The sponge silicatein-interacting protein silintaphin-2 blocks calcite formation of calcareous sponge spicules at the vaterite stage

2013

Ca-carbonate, the inorganic matrix of the spicules from the calcareous sponges, is formed as the result of an enzyme-catalyzed reaction with the carbonic anhydrase [CA] as a decisive component. The growth and the morphology of the spicules are genetically controlled, and are taxon-specific. In the present study it is shown that the silicatein-interacting protein silintaphin-2 is present at the surface of the siliceous spicules of the demosponge Suberites domuncula and prevents the association of calcareous crystals synthesized in vitro to these skeletal elements. Silintaphin-2 comprises a Ca2+-binding domain that is formed by a 22 amino acid-long peptide, N-DDDSQGEIQSDMAEEEDDDNVD-C. This ve…

CalcitebiologyCalcareous spongeChemistryGeneral Chemical EngineeringGeneral Chemistrybiology.organism_classificationSuberites domunculaSpongechemistry.chemical_compoundCrystallographySponge spiculeDemospongeVateriteCalcareousRSC Adv.
researchProduct

Silicateins, the major biosilica forming enzymes present in demosponges: protein analysis and phylogenetic relationship.

2007

Silicateins are enzymes, which are restricted to sponges (phylum Porifera), that mediate the catalytic formation of biosilica from monomeric silicon compounds. The silicatein protein is compartmented in the sponges in the axial filaments which reside in the axial canals of the siliceous spicules. In the present study silicatein has been isolated from the freshwater sponge Lubomirskia baicalensis where it occurs in isoforms with sizes of 23 kDa, 24 kDa and 26 kDa. Since the larger protein is glycosylated we posit that it is a processed form of one of the smaller size forms. The silicatein isoforms are post-translationally modified by phosphorylation; at least four isoforms exist with pI's of…

Cathepsin LMolecular Sequence DataCathepsin LDemospongeCatalytic triadGeneticsAnimalsAmino Acid SequenceGenePeptide sequencePhylogenyCathepsinbiologySequence Homology Amino AcidGeneral MedicineExonsbiology.organism_classificationSilicon DioxideCathepsinsIntronsPoriferaSuberites domunculaSpongeCysteine EndopeptidasesMicroscopy ElectronBiochemistrybiology.proteinGene
researchProduct

Application of a MTT Assay for Screening Nutritional Factors in Growth Media of Primary Sponge Cell Culture

2004

Marine sponges (Porifera) are producers of the largest variety of bioactive compounds among benthic marine organisms. In vitro culture of marine sponge cells has been proposed for the sustainable production of these pharmacologically interesting compounds from marine sponges but with limited success. The development of a suitable growth medium is an essential prerequisite for sponge cells grown in vitro. The MTT (3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide) assay was adapted to screen for potential nutritional factors in formulating a growth medium for primary cell culture of Suberites domuncula. In 96-well plates, the effects of nutritional factors including glutamine, pyr…

Cell SurvivalGlutamineIronCell Culture TechniquesCell CountMicrobiologychemistry.chemical_compoundPyruvic AcidAnimalsNutritional Physiological PhenomenaMTT assayViability assayFood scienceGrowth mediumbiologyCell growthSilicatesbiology.organism_classificationCulture MediaPoriferaSuberites domunculaGlutamineSpongechemistryCell cultureBiotechnologyBiotechnology Progress
researchProduct

The stem cell concept in sponges (Porifera): Metazoan traits.

2006

Sponges are considered the oldest living animal group and provide important insights into the earliest evolutionary processes in the Metazoa. This paper reviews the evidence that sponge stem cells have essential roles in cellular specialization, embryogenesis and Bauplan formation. Data indicate that sponge archaeocytes not only represent germ cells but also totipotent stem cells. Marker genes have been identified which are expressed in totipotent stem cells and gemmule cells. Furthermore, genes are described for the three main cell lineages in sponge, which share a common origin from archaeocytes and result in the differentiation of skeletal, epithelial, and contractile cells.

Cell divisionCellular differentiationBiologyModels BiologicalEvolution MolecularAnimalsCell LineageMuscle SkeletalPhylogenyMuscle CellsGene Expression ProfilingMultipotent Stem CellsStem CellsCell DifferentiationEpithelial CellsCell BiologyAnatomyGemmulebiology.organism_classificationCell biologyPoriferaSuberites domunculaSpongeMultipotent Stem CellStem cellArchaeocyteCell DivisionDevelopmental BiologySeminars in celldevelopmental biology
researchProduct

Bio-inorganic Nanomaterials for Biomedical Applications (Bio-silica and Polyphosphate)

2014

Bio-silica represents the main mineral component of the sponge skeletal elements (siliceous spicules), while bio-polyphosphate (polyP), a multifunctional polymer existing in microorganisms and animals, acts, among others, as reinforcement for pores in cell membranes. These natural inorganic bio-polymers, which can be readily prepared, either by recombinant enzymes (bio-silica and polyP) or chemically (polyP), are promising materials/substances for the amelioration and/or treatment of human bone diseases and dysfunctions. Bone defects in human, caused by fractures/nonunions or trauma, have an increasing impact and have become a medical challenge in the present-day aging population. Frequentl…

Cell signalingbiologyChemistryMesenchymal stem cellOsteoporosismedicine.diseasebiology.organism_classificationCell biologyExtracellular matrixHaematopoiesisSpongeRANKLmedicinebiology.proteinStem cell
researchProduct

Probing the Multiple Structures of Vaterite through Combined Computational and Experimental Raman Spectroscopy.

2014

First-principles Raman spectra have been computed for several new vaterite structural models that have been recently proposed, and compared with spectra recorded on a set of biogenic, geological and synthetic samples. This set includes new measurements collected on Herdamania momus spicules (Great Barrier Reef, Queensland, Australia), which are known to have purity and crystallinity that are higher than for other biogenic samples. Overall, due to the close structural connection between the various models, the computed Raman spectra are found to be broadly similar. However, the spectra obtained for the two most stable models (monoclinic C2 and trigonal P3221, corresponding to two different p…

Chemistry02 engineering and technologyTrigonal crystal system010402 general chemistry021001 nanoscience & nanotechnology01 natural sciencesGreat barrier reefSpectral line0104 chemical sciencesSurfaces Coatings and FilmsElectronic Optical and Magnetic MaterialsCrystallographysymbols.namesakeCrystallinityGeneral EnergySponge spiculeVateritesymbolsPhysical and Theoretical Chemistry0210 nano-technologyRaman spectroscopyMonoclinic crystal system
researchProduct

Alkaloids from the Sponge-Associated FungusAspergillussp.

2012

Seven new alkaloids including tryptoquivaline K (1) and fumiquinazolines K–P (2–7), bearing a rare 1-aminocyclopropane-1-carboxylic acid residue, together with six known compounds (8–13), were isolated from the fungus Aspergillus sp. obtained from the Mediterranean sponge Tethya aurantium. The structures of the new compounds were determined by extensive analysis by 1D and 2D NMR spectroscopy and mass spectrometry. The absolute configurations of tryptoquivaline K (1) and fumiquinazolines K and L (2, 3) were determined by TDDFT ECD calculations of their solution conformers, and the configurational assignment of the related fumiquinazolines M–P (4–7) was achieved by comparison of their ECD spe…

Circular dichroismAspergillusbiologyStereochemistryChemistryOrganic Chemistrybiology.organism_classificationMass spectrometrySpongePhysical and Theoretical ChemistryTethya aurantiumCytotoxicityConformational isomerismTwo-dimensional nuclear magnetic resonance spectroscopyEuropean Journal of Organic Chemistry
researchProduct

Lactones from the Sponge-Derived Fungus Talaromyces rugulosus.

2017

The marine-derived fungus Talaromyces rugulosus isolated from the Mediterranean sponge Axinella cannabina and cultured on solid rice medium yielded seventeen lactone derivatives including five butenolides (1–5), seven (3S)-resorcylide derivatives (6–12), two butenolide-resorcylide dimers (13 and 14), and three dihydroisocoumarins (15–17). Among them, fourteen compounds (1–3, 6–16) are new natural products. The structures of the isolated compounds were elucidated by 1D and 2D NMR (Nuclear Magnetic Resonance) spectroscopy as well as by ESI-HRMS (ElectroSpray Ionization-High Resolution Mass Spectrometry). TDDFT-ECD (Time-Dependent Density Functional Theory-Electronic Circular Dichroism) calcul…

Circular dichroismElectrosprayTalaromyces rugulosusStereochemistryPharmaceutical ScienceFungus010402 general chemistry01 natural sciences<i>Talaromyces rugulosus</i>; lactones; ECD calculation; cytotoxicityECD calculationArticlelactonesMiceTermészettudományok4-ButyrolactoneCell Line TumorDrug DiscoveryAnimalsLeukemia L5178Kémiai tudományokCytotoxicitylcsh:QH301-705.5Pharmacology Toxicology and Pharmaceutics (miscellaneous)Nuclear Magnetic Resonance Biomolecularchemistry.chemical_classificationBiological Productsbiology010405 organic chemistryChemistryCircular DichroismTalaromyces rugulosusbiology.organism_classification0104 chemical sciencesPoriferaSpongelcsh:Biology (General)Talaromycesddc:540cytotoxicityTwo-dimensional nuclear magnetic resonance spectroscopyLactoneMarine drugs
researchProduct

Cloning and expression of the sponge longevity gene SDLAGL.

2000

Porifera show a characteristic Bauplan in spite of the fact that (almost) all cells are telomerase-positive and presumably provided with an unlimited potency for cell proliferation. One gene, SDLAGL, was identified in the marine sponge Suberites domuncula whose deduced polypeptide showed high sequence similarity to the longevity assurance genes from other Metazoa. While in single cells no transcripts of SDLAGL could be identified, high expression was seen after re-aggregation of single cells and in proliferating cells of primmorphs.

CloningEmbryologybiologyCell growthmedia_common.quotation_subjectLongevityLongevitySponges. Porifera. Suberites domuncula. Longevity assurance-likeProteinsbiology.organism_classificationBioinformaticsCell biologyPoriferaSuberites domunculaSpongeGene Expression RegulationGene expressionAnimalsCloning MolecularGenemedia_commonDevelopmental BiologyMechanisms of development
researchProduct

Evolutionary analysis of G-proteins in early metazoans: Cloning of α- and β-subunits from the sponge Geodia cydonium1The sequences reported here have…

1998

G-protein-coupled (seven-transmembrane segment)-receptors represent a major group of metazoan receptors, involved in transduction of extracellular signals. The G-proteins, which are made up of Galpha/beta/gamma-subunits, link the receptors to the effector system(s). To analyze the phylogenetic relationships among the metazoan alpha-subunits of G-proteins, cDNAs of alpha-subunits were isolated from Geodia cydonium, a marine sponge belonging to the lowest metazoan phylum, Porifera. One encodes a putative isotype of a stimulator of the adenylyl cyclase (Galpha s), another one a putative inhibitor of the adenylyl cyclase (Galpha i/o) and the third one a putative activator of phospholipase C (Ga…

CloningGeneticsPhospholipase CPhylogenetic treeEvolutionG proteinEffectorMolecular phylogenyCell BiologyAnatomyBiologyPoriferaAdenylyl cyclasechemistry.chemical_compoundchemistrySpongePhylogenetics(Geodia cydonium)MonophylyMolecular BiologyPeptide sequenceBiochimica et Biophysica Acta (BBA) - Molecular Cell Research
researchProduct