Search results for "Statistical"

showing 10 items of 4960 documents

Can number and size of offspring increase simultaneously?--a central life-history trade-off reconsidered.

2011

Abstract Background To maximize their fitness, parents are assumed to allocate their resources optimally between number and size of offspring. Although this fundamental life-history trade-off has been subject to long standing interest, its genetic basis, especially in wild mammals, still remains unresolved. One important reason for this problem is that a large multigenerational pedigree is required to conduct a reliable analysis of this trade-off. Results We used the REML-animal model to estimate genetic parameters for litter size and individual birth size for a common Palearctic small mammal, the bank vole (Myodes glareolus). Even though a phenotypic trade-off between offspring number and …

0106 biological sciencesLitter (animal)MaleGenetic correlationLitter SizeEvolutionOffspringZoologyTrade-off010603 evolutionary biology01 natural sciencesGenetic correlationHeritability03 medical and health sciencesQuantitative Trait Heritable<it>Myodes glareolus</it>Genetic variationMyodes glareolusQH359-425AnimalsBody SizeSelection GeneticEcology Evolution Behavior and SystematicsSelection (genetic algorithm)030304 developmental biology0303 health sciencesModels StatisticalbiologyArvicolinaeGenetic VariationHeritabilitybiology.organism_classificationBiological EvolutionBirth sizeBank volePhenotypeEvolutionary biologyFemaleResearch ArticleBMC evolutionary biology
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Advantage of rare infanticide strategies in an invasion experiment of behavioural polymorphism

2012

Killing conspecific infants (infanticide) is among the most puzzling phenomena in nature. Stable polymorphism in such behaviour could be maintained by negative frequency-dependent selection (benefit of rare types). However, it is currently unknown whether there is genetic polymorphism in infanticidal behaviour or whether infanticide may have any fitness advantages when rare. Here we show genetic polymorphism in non-parental infanticide. Our novel invasion experiment confirms negative frequency-dependent selection in wild bank vole populations, where resource benefits allow an infanticidal strategy to invade a population of non-infanticidal individuals. The results show that infanticidal beh…

0106 biological sciencesMalePopulationGeneral Physics and AstronomyBiology010603 evolutionary biology01 natural sciencesGenetic correlationGeneral Biochemistry Genetics and Molecular BiologyArticleSex FactorsPolymorphism (computer science)AnimalseducationMaternal BehaviorSelection (genetic algorithm)Paternal BehaviorComputingMilieux_MISCELLANEOUSGeneticseducation.field_of_studyMultidisciplinaryModels StatisticalPolymorphism GeneticBehavior AnimalArvicolinaeGeneral Chemistrybiology.organism_classification010601 ecologyBank voleAggressionAnimals NewbornEvolutionary biologyMutationLinear ModelsFemale[SDE.BE]Environmental Sciences/Biodiversity and Ecology
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Grapes and vines of the Phoenicians: morphometric analyses of pips from modern varieties and Iron Age archaeological sites in the Western Mediterrane…

2021

The present study aims to contribute to the investigation of the role of Phoenicians in the spreading and trade of the grapevine through the morphometric analysis of grape pips. Waterlogged and charred samples were selected from three Iron Age sites in the Western Mediterranean: Motya (Sicily, Italy), Nuraghe S’Urachi (Sardinia, Italy) and Huelva (Andalusia, Spain). While only Motya is a Phoenician foundation, all three were nevertheless associated with Phoenician expansion and cultural interaction. Ten cultivars from the “Vivaio Federico Paulsen” in Marsala (western Sicily) were chosen as modern reference material. The key challenge was the comparison of archaeological pips preserved throu…

0106 biological sciencesMediterranean climateWestern MediterraneanArcheology[SHS.ARCHEO]Humanities and Social Sciences/Archaeology and PrehistoryArqueologiaPhoenicians01 natural sciencesFossilization03 medical and health sciencesStatistical analysesPhoenicians; viticulture; morphometry; Western Mediterranean; experimental charringCultivarDomesticationComputingMilieux_MISCELLANEOUS030304 developmental biologyexperimental charring0303 health sciencesViticultureExperimental charringMorphometry15. Life on landviticultureArchaeologylanguage.human_languageGeographyMorphometric analysislanguagePhoenician[SDE.BE]Environmental Sciences/Biodiversity and Ecologymorphometry010606 plant biology & botanyWest mediterranean
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Efficient estimation of generalized linear latent variable models.

2019

Generalized linear latent variable models (GLLVM) are popular tools for modeling multivariate, correlated responses. Such data are often encountered, for instance, in ecological studies, where presence-absences, counts, or biomass of interacting species are collected from a set of sites. Until very recently, the main challenge in fitting GLLVMs has been the lack of computationally efficient estimation methods. For likelihood based estimation, several closed form approximations for the marginal likelihood of GLLVMs have been proposed, but their efficient implementations have been lacking in the literature. To fill this gap, we show in this paper how to obtain computationally convenient estim…

0106 biological sciencesMultivariate statisticsMultivariate analysisComputer scienceBinomials01 natural sciencesPolynomials010104 statistics & probabilityAmoebastilastolliset mallitestimointiProtozoansLikelihood FunctionsMultidisciplinaryApproximation MethodsStatistical ModelsSimulation and ModelingApplied MathematicsStatisticsQLinear modelREukaryotaLaplace's methodData Interpretation StatisticalPhysical SciencesVertebratesMedicineAlgorithmAlgorithmsResearch ArticleOptimizationScienceLatent variableResearch and Analysis Methods010603 evolutionary biologygeneralized linear latent variable modelsSet (abstract data type)BirdsAnimalsComputer Simulation0101 mathematicsta112OrganismsBiology and Life SciencesStatistical modelMarginal likelihoodAlgebraAmniotesMultivariate AnalysisLinear ModelsMathematicsSoftwarePLoS ONE
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Spatiotemporal Structure of Host‐Pathogen Interactions in a Metapopulation

2009

International audience; The ecological and evolutionary dynamics of species are influenced by spatiotemporal variation in population size. Unfortunately, we are usually limited in our ability to investigate the numerical dynamics of natural populations across large spatial scales and over long periods of time. Here we combine mechanistic and statistical approaches to reconstruct continuous-time infection dynamics of an obligate fungal pathogen on the basis of discrete-time occurrence data. The pathogen, Podosphaera plantaginis, infects its host plant, Plantago lanceolata, in a metapopulation setting where the presence of the pathogen has been recorded annually for 6 years in similar to 4,00…

0106 biological sciencesPODOSPHAERA PLANTAGINISMetapopulationRELATION PLANTE-PATHOGENEBiologyENCOUNTER RATE010603 evolutionary biology01 natural sciences03 medical and health sciencesAscomycotaHOST-PARASITE INTERACTIONAnimals[INFO]Computer Science [cs]MECHANISTIC-STATISTICAL MODEL[MATH]Mathematics [math]Evolutionary dynamicsPlantagoFinlandEcology Evolution Behavior and SystematicsOverwinteringCoevolutionPlant Diseases030304 developmental biologyLocal adaptation0303 health sciencesObligateHost (biology)EcologyCOEVOLUTIONPopulation sizeBiological EvolutionSURVIVAL PROBABILITYTEMPORAL STABILITYPLANTAGO LANCELOLATAHost-Pathogen InteractionsSeasonsAlgorithmsThe American Naturalist
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Risk of predation makes foragers less choosy about their food.

2017

18 pages; International audience; Animals foraging in the wild have to balance speed of decision making and accuracy of assessment of a food item's quality. If resource quality is important for maximizing fitness, then the duration of decision making may be in conflict with other crucial and time consuming tasks, such as anti-predator behaviours or competition monitoring. Individuals facing the risk of predation and/or competition should adjust the duration of decision making and, as a consequence, their level of choosiness for resources. When exposed to predation, the forager could either maintain its level of choosiness for food items but accept a reduction in the amount of food items con…

0106 biological sciencesPhysiologylcsh:MedicinePredationSocial SciencesKaplan-Meier EstimateChoice Behavior01 natural sciencesPredationCognitionMathematical and Statistical TechniquesBeetlesMedicine and Health Sciences[ SDV.EE.IEO ] Life Sciences [q-bio]/Ecology environment/SymbiosisPsychologyForagingDecision-makinglcsh:Sciencemedia_common2. Zero hungerMultidisciplinaryEcologyAnimal BehaviorEcology05 social sciencesEukaryotaPlantsTrophic InteractionsInsectsCommunity EcologyPhysical SciencesSeedsStatistics (Mathematics)Research ArticleRiskOpportunity costArthropodaMovementmedia_common.quotation_subjectDecision MakingForagingBiologyResearch and Analysis Methods010603 evolutionary biologyIntraspecific competitionCompetition (biology)Food PreferencesAnimals0501 psychology and cognitive sciencesQuality (business)050102 behavioral science & comparative psychologyStatistical MethodsBehavior[ SDE.BE ] Environmental Sciences/Biodiversity and Ecologylcsh:REcology and Environmental SciencesCognitive PsychologyFood ConsumptionOrganismsBiology and Life SciencesInterspecific competitionInvertebratesFoodPredatory BehaviorCognitive Sciencelcsh:QWeeds[SDE.BE]Environmental Sciences/Biodiversity and EcologyPhysiological ProcessesZoologyMathematicsNeuroscienceGeneralized Linear ModelDemography[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/Symbiosis
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Detection of Allee effects in marine fishes: analytical biases generated by data availability and model selection

2017

The demographic Allee effect, or depensation, implies positive association between per capita population growth rate and population size at low abundances, thereby lowering growth ability of sparse populations. This can have far-reaching consequences on population recovery ability and colonization success. In the context of marine fishes, there is a widespread perception that Allee effects are rare or non-existent. However, studies that have failed to detect Allee effects in marine fishes have suffered from several fundamental methodological and data limitations. In the present study, we challenge the prevailing perception about the rarity of Allee effects by analysing nine populations of …

0106 biological sciencesPopulation DynamicsAtlantic herringBiologyModels Biological010603 evolutionary biology01 natural sciencesPopulation densityGeneral Biochemistry Genetics and Molecular BiologycompensationDepensationsymbols.namesakePer capitaAnimalsPopulation growth14. Life underwaterClupea harengusPopulation GrowthGeneral Environmental ScienceAllee effectlow-abundance dynamicsPopulation DensityModels StatisticalEcologyGeneral Immunology and MicrobiologyEcology010604 marine biology & hydrobiologyModel selectionPopulation sizestock–recruitment relationshipFishesBayes TheoremGeneral MedicineData availabilitydepensationsymbolsta1181General Agricultural and Biological SciencesProceedings of the Royal Society B: Biological Sciences
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An Empirical Evaluation of the Utility of Convex Hull and Standard Ellipse Areas for Assessing Population Niche Widths from Stable Isotope Data

2013

Stable isotope analyses are increasingly employed to characterise population niche widths. The convex hull area (TA) in a δ¹³C–δ¹⁵N biplot has been used as a measure of isotopic niche width, but concerns exist over its dependence on sample size and associated difficulties in among-population comparisons. Recently a more robust method was proposed for estimating and comparing isotopic niche widths using standard ellipse areas (SEA), but this approach has yet to be tested with empirical stable isotope data. The two methods measure different kind of isotopic niche areas, but both are now widely used to characterise isotopic niche widths of populations. We used simulated data and an extensive e…

0106 biological sciencesPopulation Dynamicslcsh:MedicinePopulation Modeling01 natural sciencesTheoretical EcologyFood Web StructureStatisticsRange (statistics)lcsh:ScienceFreshwater EcologyCarbon Isotopeseducation.field_of_studyMultidisciplinaryEcologyδ13CEcologyStable isotope ratioStatisticsFishesBiogeochemistryisotopic nicheTrophic Interactionstrophic nicheCommunity Ecologyconvex hullResearch ArticlePopulationNichestable isotopesBiostatistics010603 evolutionary biologyNiche ConstructionNormal distributionBayesian ellipse areavakaat isotoopitAnimals14. Life underwaterStatistical MethodseducationBiologyEcological nicheNitrogen Isotopes010604 marine biology & hydrobiologylcsh:RComputational BiologySpecies InteractionsSample size determinationSample SizeravintolokeroEnvironmental scienceta1181lcsh:QPopulation EcologyEcosystem ModelingMathematicsPLOS ONE
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Dynamic complexities in host-parasitoid interaction

1999

In the 1970s ecological research detected chaos and other forms of complex dynamics in simple population dynamics models, initiating a new research tradition in ecology. However, the investigations of complex population dynamics have mainly concentrated on single populations and not on higher dimensional ecological systems. Here we report a detailed study of the complicated dynamics occurring in a basic discrete-time model of host-parasitoid interaction. The complexities include (a) non-unique dynamics, meaning that several attractors coexist, (b) basins of attraction (defined as the set of the initial conditions leading to a certain type of an attractor) with fractal properties (pattern of…

0106 biological sciencesStatistics and ProbabilityEcology (disciplines)PopulationChaoticBiologyBifurcation diagram010603 evolutionary biology01 natural sciencesGeneral Biochemistry Genetics and Molecular Biologylaw.invention03 medical and health sciencesFractalControl theorylawIntermittencyAttractorQuantitative Biology::Populations and EvolutionStatistical physicseducation030304 developmental biology0303 health scienceseducation.field_of_studyGeneral Immunology and MicrobiologyApplied MathematicsGeneral MedicineComplex dynamicsModeling and SimulationGeneral Agricultural and Biological SciencesJournal of theoretical biology
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The role of noise on the steady state distributions of phytoplankton populations

2016

The spatio-temporal behaviour of total chlorophyll concentration is investigated in the middle of the Tyrrhenian Sea by using a stochastic approach. The study is based on a reaction-diffusion-taxis model, which is used to analyse the dynamics of five phytoplankton groups, responsible for about 80% of the total chlorophyll a inside the euphotic zone of the water column. The analysis is performed by considering: (i) the intraspecific competition of the phytoplanktonic groups for limiting factors, i.e. light intensity and nutrient concentration, (ii) the seasonal changes of environmental variables, and (iii) the random fluctuations of the components of the velocity field and temperature. Speci…

0106 biological sciencesStatistics and ProbabilityPhysicsSteady state (electronics)010504 meteorology & atmospheric sciences010604 marine biology & hydrobiologyturbulenceHydrodynamic fluctuationstochastic processes (theory)Statistical and Nonlinear Physics01 natural sciencesSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)NoisePhytoplanktonHydrodynamic fluctuations; stochastic particle dynamics (theory); stochastic processes (theory); turbulence; Statistical and Nonlinear Physics; Statistics and Probability; Statistics Probability and Uncertaintystochastic particle dynamics (theory)Statistical physicsStatistics Probability and UncertaintyStatistical and Nonlinear Physic0105 earth and related environmental sciencesJournal of Statistical Mechanics: Theory and Experiment
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