Search results for "Stochastic processes"

showing 10 items of 103 documents

Structure of rat behavior in hole-board: I) multivariate analysis of response to anxiety

2008

Aim of present paper was to carry out an analysis of rat behavior in hole-board following different multivariate approaches. Thirty male Wistar rats were observed in a hole-board apparatus and their behavior recorded for 10 min through a digital videocamera for a following frame-by-frame analysis. Both descriptive and multivariate analyses were used. Descriptive analysis showed that roughly 85% of the whole behavioral structure encompassed six patterns appearing during the first minute of observation: walking, climbing, rearing, immobile-sniffing, edge-sniff and head-dip. As to multivariate approach, cluster analysis showed three main dyadic associations: [edge-sniff/head-dip], [walking/cli…

MaleMultivariate statisticsMultivariate analysisHole-boardEdge-sniffStructure (category theory)Experimental and Cognitive PsychologyMotor ActivityAnxietySettore BIO/09 - FisiologiaBehavioral NeuroscienceSniffingStatisticsReaction TimemedicineAnimalsCluster AnalysisRats WistarStochastic ProcessesBehavior AnimalDescriptive statisticsMultivariate analysiBehavioral patternGroomingRatsClimbingMultivariate AnalysisRatAnxietymedicine.symptomPsychologySocial psychologyHead-dipPhysiology & Behavior
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Multivariate analysis of the modifications induced by an environmental acoustic cue on rat exploratory behavior.

2007

The aim of the present paper is to study by means of a multivariate analysis the modifications induced by an environmental acoustic cue on the structure of rat exploratory behavior. Adult male Wistar rats were observed during the exploration of a soundproof observation box. Each rat was acoustically stimulated after 150 s from the beginning of the experimental session, lasting 300 s, and recorded through a digital videocamera. A frame by frame analysis was thereafter carried out using a professional video-recording system. Thirteen behavioral patterns were selected: immobility, immobile-sniffing, walking, rearing, climbing, chewing, paw-licking, face-grooming, body-grooming, head-turning, t…

MaleMultivariate statisticsMultivariate analysisTime FactorsOrienting responseVideo RecordingSniffingExperimental and Cognitive PsychologyExploratory behaviorStimulus (physiology)EnvironmentSettore BIO/09 - FisiologiaOrienting responseBehavioral NeuroscienceSniffingStatisticsAnimalsCluster AnalysisRats WistarStatisticCommunicationStochastic ProcessesBehavior Animalbusiness.industryMultivariate analysiBehavioral patternAcoustic stimulationAcousticsRatsClimbingMultivariate AnalysisRatCuesbusinessPsychology
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Effects of 7-OH-DPAT and U 99194 on the behavioral response to hot plate test, in rats

2005

Aim of present study was to investigate in male Wistar rats, whether behavioral response to hot plate test application could be influenced by systemic administration of 7-OH-DPAT, a dopaminergic (DA) D3 versus D2 receptor agonist, or U 99194, a DA D3 versus D2 receptor antagonist. Each trial lasted no more than 10 s and the whole experimental session lasted 120 min. Animal behavior was recorded by means of a digital videocamera and later, frame by frame examined using a professional videorecorder. Latency of each behavioral pattern, characterizing the response, was analysed, showing significant changes only with U 99194. A multivariate cluster analysis indicated the presence of three main b…

MalePain ThresholdAgonistmedicine.medical_specialtyHot TemperatureDopaminergic D3 receptorTetrahydronaphthalenesmedicine.drug_classDopamine AgentsExperimental and Cognitive Psychology7-OH-DPATSettore BIO/09 - FisiologiaBehavioral Neurosciencechemistry.chemical_compoundDopamine receptor D3Dopamine receptor D2Internal medicineAvoidance LearningReaction TimemedicineAnimalsCluster AnalysisRats WistarHot plate testNeurotransmitterBehavioral switching7-OH-DPATStochastic ProcessesBehavior AnimalReceptors Dopamine D2U 99194DopaminergicBehavioral patternRatsEndocrinologychemistryIndansRatPsychologyLearning processePhysiology & Behavior
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A stochastic approach for automatic registration and fusion of left atrial electroanatomic maps with 3D CT anatomical images.

2007

The integration of electroanatomic maps with highly resolved computed tomography cardiac images plays an important role in the successful planning of the ablation procedure of arrhythmias. In this paper, we present and validate a fully-automated strategy for the registration and fusion of sparse, atrial endocardial electroanatomic maps (CARTO maps) with detailed left atrial (LA) anatomical reconstructions segmented from a pre-procedural MDCT scan. Registration is accomplished by a parameterized geometric transformation of the CARTO points and by a stochastic search of the best parameter set which minimizes the misalignment between transformed CARTO points and the LA surface. The subsequent …

MaleRadiology Nuclear Medicine and ImagingPhysics and Astronomy (miscellaneous)Computer sciencemedicine.medical_treatmentBiomedical EngineeringComputed tomographySensitivity and SpecificityPattern Recognition AutomatedImaging Three-DimensionalLeft atrialArtificial IntelligenceAtrial FibrillationmedicineHumansComputer visionStochastic Processesmedicine.diagnostic_testRadiological and Ultrasound Technologybusiness.industryGeometric transformationBody Surface Potential MappingReproducibility of ResultsAblationCatheterSubtraction TechniqueFemaleArtificial intelligencebusinessTomography X-Ray ComputedAlgorithmsPhysics in medicine and biology
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Prediction of leukocyte counts during paediatric acute lymphoblastic leukaemia maintenance therapy

2019

Maintenance chemotherapy with oral 6-mercaptopurine and methotrexate remains a cornerstone of modern therapy for acute lymphoblastic leukaemia. The dosage and intensity of therapy are based on surrogate markers such as peripheral blood leukocyte and neutrophil counts. Dosage based leukocyte count predictions could provide support for dosage decisions clinicians face trying to find and maintain an appropriate dosage for the individual patient. We present two Bayesian nonlinear state space models for predicting patient leukocyte counts during the maintenance therapy. The models simplify some aspects of previously proposed models but allow for some extra flexibility. Our second model is an ext…

MaleTime seriesAdolescentaikasarjatNeutrophilsDatasets as Topiclcsh:MedicinebiomarkkeritModels BiologicalArticleMaintenance ChemotherapyPaediatric cancerLeukocyte CountSyöpätaudit - CancersAntineoplastic Combined Chemotherapy ProtocolsLeukocytesHumansDrug Dosage CalculationsChildlcsh:Sciencetilastolliset mallitStochastic modellingstokastiset prosessitStochastic ProcessesvalkosolutMercaptopurinebayesilainen menetelmäStatisticslcsh:RInfantennusteetBayes TheoremPrecursor Cell Lymphoblastic Leukemia-LymphomaApplied mathematicsMethotrexateChild Preschoollääkehoitoakuutti lymfaattinen leukemiasyöpätauditFemalelcsh:Q
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Structure of rat behavior in hole-board: II) multivariate analysis of modifications induced by diazepam.

2009

In our previous study we suggested that multivariate analysis could improve hole-board test reliability providing a more useful tool to determine behavioral effects of anxiolytic drugs. To support this hypothesis, a multivariate analysis of rat behavior in hole-board, following administration of the reference anxiolytic drug diazepam, was carried out. Four groups, each composed of thirty male Wistar rats, were used: one saline and three diazepam injected (0.25, 0.5 and 2 mg/kg IP). Rat behavior was recorded for 10 min through a digital videocamera. Descriptive and multivariate analyses were carried out. In all groups, more than 80% of whole behavioral structure encompassed walking, climbing…

Malemedicine.medical_specialtyMultivariate analysismedicine.drug_classmedicine.medical_treatmentExperimental and Cognitive PsychologyAnxiolyticSettore BIO/09 - FisiologiaSensitivity and SpecificityHypnoticBehavioral NeuroscienceInternal medicinemedicineAnimalsCluster AnalysisRats WistarSalineStochastic ProcessesDiazepamBehavior AnimalHole-board Anxiety Diazepam Multivariate analysis Head-dip Edge-sniff RatReproducibility of ResultsRatsEndocrinologyAnticonvulsantAnti-Anxiety AgentsAnesthesiaClimbingData Interpretation StatisticalMultivariate AnalysisExploratory BehaviorAnxietymedicine.symptomPsychologyDiazepammedicine.drugBehavioral ResearchPhysiologybehavior
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Le martingale: aspetti teorici ed applicativi

2001

This paper offers an overview on the characteristics of martingales. These latter are markovian processes without underlying trend, in which the stochastic variable depends on its ultimate realisation. Some application fields are in studies relative to financial markets, and especially the derivative securities. Drawing from the theoretical and empirical literature, the main mathematical characteristics are presented. In order to transform processes with increasing or decreasing trends into martingales, the Doob-Meyer decomposition and the change of probability measure approaches can be adopted. Finally, four applications are considered with regard to the pricing of futures, call options an…

Martingales stochastic processes calculus of probabilitySettore MAT/06 - Probabilita' E Statistica Matematica
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Time scales of adaptive behavior and motor learning in the presence of stochastic perturbations.

2009

In this paper, the major assumptions of influential approaches to the structure of variability in practice conditions are discussed from the perspective of a generalized evolving attractor landscape model of motor learning. The efficacy of the practice condition effects is considered in relation to the theoretical influence of stochastic perturbations in models of gradient descent learning of multiple dimension landscapes. A model for motor learning is presented combining simulated annealing and stochastic resonance phenomena against the background of different time scales for adaptation and learning processes. The practical consequences of the model's assumptions for the structure of pract…

Mathematical optimizationAcclimatizationMovementBiophysicsExperimental and Cognitive PsychologyMotor ActivityOscillometryAttractorAdaptation PsychologicalHumansLearningOrthopedics and Sports MedicineAttentionMotor skillAdaptive behaviorBehaviorStochastic ProcessesStochastic processbusiness.industryGeneral MedicineStochastic resonance (sensory neurobiology)Motor SkillsSimulated annealingArtificial intelligenceMotor learningGradient descentbusinessPsychologyNoiseHuman movement science
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Novel 3D bio-macromolecular bilinear descriptors for protein science: Predicting protein structural classes

2015

In the present study, we introduce novel 3D protein descriptors based on the bilinear algebraic form in the ℝn space on the coulombic matrix. For the calculation of these descriptors, macromolecular vectors belonging to ℝn space, whose components represent certain amino acid side-chain properties, were used as weighting schemes. Generalization approaches for the calculation of inter-amino acidic residue spatial distances based on Minkowski metrics are proposed. The simple- and double-stochastic schemes were defined as approaches to normalize the coulombic matrix. The local-fragment indices for both amino acid-types and amino acid-groups are presented in order to permit characterizing fragme…

Models MolecularProtein structural classesMathematical parametersProtein functionQuantitative Structure-Activity RelationshipBilinear interpolationQuantitative structure activity relation3D protein descriptorBilinear formProceduresChemical structureStatistical parametersMinkowski spaceProtein analysisAmino AcidsPriority journalMathematicsInterpretabilityQuantitative Biology::BiomoleculesApplied MathematicsStatistical parameterValidation studyGeneral MedicineComputer simulationDiscriminant analysisReproducibilityAmino acidAlgorithmChemistryProtein conformationModeling and SimulationStatistical modelGeneral Agricultural and Biological SciencesBiological systemAmino acid analysisAlgorithmsNonbiological modelStatistics and ProbabilityCorrelation coefficientLDAMacromolecular SubstancesMarkov chainMacromoleculeStructure analysisModels BiologicalArticleGeneral Biochemistry Genetics and Molecular BiologyCombinatoricsStochastic processesBilinear formBiologyMatrixGeneral Immunology and MicrobiologyProteinCoulombic matrixComputational BiologyProteinsReproducibility of ResultsLinear discriminant analysisWeightingCorrelation coefficientProtein structureBiological modelLinear ModelsThree-dimensional modelingJournal of Theoretical Biology
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Protein search for multiple targets on DNA

2016

Protein-DNA interactions are crucial for all biological processes. One of the most important fundamental aspects of these interactions is the process of protein searching and recognizing specific binding sites on DNA. A large number of experimental and theoretical investigations have been devoted to uncovering the molecular description of these phenomena, but many aspects of the mechanisms of protein search for the targets on DNA remain not well understood. One of the most intriguing problems is the role of multiple targets in protein search dynamics. Using a recently developed theoretical framework we analyze this question in detail. Our method is based on a discrete-state stochastic appro…

Models MolecularQuantitative Biology - Subcellular ProcessesComputer scienceProcess (engineering)Monte Carlo methodBiophysicsGeneral Physics and Astronomy03 medical and health scienceschemistry.chemical_compound0302 clinical medicinePosition (vector)Computer SimulationStatistical physicsPhysical and Theoretical ChemistrySubcellular Processes (q-bio.SC)030304 developmental biologyStochastic Processes0303 health sciencesBinding SitesModels GeneticProtein moleculesProteinsDNAchemistryFOS: Biological sciencesMonte Carlo Method030217 neurology & neurosurgeryDNAProtein BindingThe Journal of Chemical Physics
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