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showing 10 items of 25013 documents
The cost-effectiveness of using raptor nest sites to identify areas with high species richness of other taxa
2016
Abstract Given the limited resources available for conservation, it is important that the areas to preserve are selected in a cost effective manner. However, the cost effectiveness of the surrogate species strategy (the use of information on one or more species to identify areas of value for other species for which there is no, or more limited, available information) has seldom been evaluated. In this study, we investigate the opportunity cost of setting aside breeding sites of two forest raptor species (the surrogate species) by evaluating their individual and combined contribution to preserve diversity of polypores (wood-decaying fungi) and birds against the contributions of previously es…
Drosophila Evolution over Space and Time (DEST) : A New Population Genomics Resource
2021
Drosophila melanogaster is a leading model in population genetics and genomics, and a growing number of whole-genome datasets from natural populations of this species have been published over the last years. A major challenge is the integration of disparate datasets, often generated using different sequencing technologies and bioinformatic pipelines, which hampers our ability to address questions about the evolution of this species. Here we address these issues by developing a bioinformatics pipeline that maps pooled sequencing (Pool-Seq) reads from D. melanogaster to a hologenome consisting of fly and symbiont genomes and estimates allele frequencies using either a heuristic (PoolSNP) or a…
Resource availability and competition shape the evolution of survival and growth ability in a bacterial community
2013
Resource availability is one of the main factors determining the ecological dynamics of populations or species. Fluctuations in resource availability can increase or decrease the intensity of resource competition. Resource availability and competition can also cause evolutionary changes in life-history traits. We studied how community structure and resource fluctuations affect the evolution of fitness related traits using a two-species bacterial model system. Replicated populations of Serratia marcescens (copiotroph) and Novosophingobium capsulatum (oligotroph) were reared alone or together in environments with intergenerational, pulsed resource renewal. The comparison of ancestral and evol…
Environmental Fluctuations Drive Species' Competitive Success in Experimental Invasions
2020
Climate change is presumed to increase both the number and frequency of fluctuations in environmental conditions. Fluctuations can affect the ecological and evolutionary processes that make species more successful competitors. For example, fluctuating conditions can create selection pressures for traits that are profitable in adaptation to fast climate change. On an ecological timescale, environmental fluctuations can facilitate species competitive success by reducing other species’ population sizes. Climate change could then enhance species invasions into new areas if fluctuation-adapted invaders displace their native competitors in chancing environments. We tested experimentally whether f…
Non-linear regional weather-growth relationships indicate limited adaptability of the eastern Baltic Scots pine
2021
Abstract Under changing climate, temporal and spatial stability (stationarity) of growth responses of trees to weather and climate, which has often been presumed without explicit testing, is crucial for prediction of productivity and sustainability of forests. However, considering evolutionary adaptation of tree populations to wide spatiotemporal ecological gradients, extrapolation of linear responses, which could be observed in limited parts of the gradients (certain locality), can result in biased results. Accordingly, the plasticity of responses of tree-ring width of the eastern Baltic populations of Scots pine (Pinus sylvestris L.) to meteorological conditions across the regional climat…
Exploring individual and population eco-evolutionary feedbacks under the coupled effects of fishing and predation
2020
Intensive fishing that selects for large and old individuals can have pervasive effects on traits directly associated with the fecundity and survival of the target species. The observed reduction in fish body size can result in earlier sexual maturity at a smaller body size, leading to a lower individual reproductive output and population productivity in the long term. In addition, increased predation can induce similar responses in age and size at maturity due to the release of intraspecific competition and the lower population density. Thus, the combined impact of fisheries and predation is more difficult to predict due to their competition for fish, ultimately limiting and directing the …
Diplura in caves : diversity, ecology, evolution and biogeography
2020
Abstract Diplurans (Hexapoda) are considered the ‘ideal cavernicolous animal’ having one of the highest ratios of cave-adapted vs. non-cave-adapted species. They are successful colonizers of subterranean habitats, thriving in all cryptic, dark, terrestrial environments. Diplurans play an important role in the decomposition of organic matter below the ground and are sensitive to anthropogenic pressures. We present the first comprehensive review about cave Diplura diversity, ecology, evolution, distribution and biogeography. We provide a roadmap for research questions regarding the ecology, aimed at stimulating the pursuit of new studies on this fascinating group. Filling these current knowle…
Toward a mechanistic understanding of vulnerability to hook-and-line fishing: Boldness as the basic target of angling-induced selection
2017
In passively operated fishing gear, boldness-related behaviors should fundamentally affect the vulnerability of individual fish and thus be under fisheries selection. To test this hypothesis, we used juvenile common-garden reared carp (Cyprinus carpio) within a narrow size-range to investigate the mechanistic basis of behavioral selection caused by angling. We focused on one key personality trait (i.e., boldness), measured in groups within ponds, two morphological traits (body-shape and head-shape), and one life-history trait (juvenile growth capacity) and studied mean standardized selection gradients caused by angling. Carp behavior was highly repeatable within ponds. In the short-term, ov…
A haplotype-resolved, de novo genome assembly for the wood tiger moth (Arctia plantaginis) through trio binning
2020
ABSTRACT Background Diploid genome assembly is typically impeded by heterozygosity because it introduces errors when haplotypes are collapsed into a consensus sequence. Trio binning offers an innovative solution that exploits heterozygosity for assembly. Short, parental reads are used to assign parental origin to long reads from their F1 offspring before assembly, enabling complete haplotype resolution. Trio binning could therefore provide an effective strategy for assembling highly heterozygous genomes, which are traditionally problematic, such as insect genomes. This includes the wood tiger moth (Arctia plantaginis), which is an evolutionary study system for warning colour polymorphism. F…
Selection on fish personality differs between a no-take marine reserve and fished areas
2021
9 pages, 2 tables, 3 figures.-- This is an open access article under the terms of the Creative Commons Attribution License