Search results for "Systematic"

showing 10 items of 7608 documents

Genetic variation in natural populations of the aphid Rhopalosiphum padi as revealed by maternally inherited markers

1996

A survey on 148 clones of the aphid Rhopalosiphum padi from 11 widespread localities has been carried out to study the genetic structure of populations of this species as revealed by mitochondrial DNA restriction site and length polymorphisms as well as by restriction site analysis of a maternally inherited plasmid carried by the aphid eubacterial endosymbiont Buchnera aphidicola. Our results support the existence in the area under study of two main aphid maternal lineages strikingly coincidental with the two main reproductive categories displayed by this species. Those aphid clones possessing an incomplete life cycle that lacks the sexual phase (anholocyclic or androcyclic clones) show mit…

0106 biological sciencesGeneticseducation.field_of_studyAphidMitochondrial DNAPopulationHaplotypebiochemical phenomena metabolism and nutritionBiologybiology.organism_classificationGENETIQUE MITOCHONDRIALE010603 evolutionary biology01 natural sciencesINSECTE010602 entomologyRestriction siteRhopalosiphum padiGenetic variation[SDV.BBM] Life Sciences [q-bio]/Biochemistry Molecular BiologyGenetics[SDV.BBM]Life Sciences [q-bio]/Biochemistry Molecular BiologyBuchneraeducationComputingMilieux_MISCELLANEOUSEcology Evolution Behavior and SystematicsMolecular Ecology
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Demosponge EST sequencing reveals a complex genetic toolkit of the simplest metazoans.

2010

Sponges (Porifera) are among the simplest living and the earliest branching metazoans. They hold a pivotal role for studying genome evolution of the entire metazoan branch, both as an outgroup to Eumetazoa and as the closest branching phylum to the common ancestor of all multicellular animals (Urmetazoa). In order to assess the transcription inventory of sponges, we sequenced expressed sequence tag libraries of two demosponge species, Suberites domuncula and Lubomirskia baicalensis, and systematically analyzed the assembled sponge transcripts against their homologs from complete proteomes of six well-characterized metazoans--Nematostella vectensis, Caenorhabditis elegans, Drosophila melanog…

0106 biological sciencesGenome evolutionanimal structuresMolecular Sequence Datacomparative genomicsBiologyLubomirskia baicalensis010603 evolutionary biology01 natural sciencesGenomeEvolution Molecular03 medical and health sciencesGeneticsAnimalsCiona intestinalisMolecular BiologyGeneEcology Evolution Behavior and SystematicsPhylogenyResearch Articles030304 developmental biologymetazoan evolution; comparative genomics; genome complexity; Suberites domuncula; Lubomirskia baicalensisComparative genomicsGeneticsExpressed Sequence Tags0303 health sciencesComparative Genomic HybridizationGenomegenome complexityBase SequenceSequence Homology Amino Acidmetazoan evolutionbiology.organism_classificationSuberites domunculaEumetazoaPoriferaSuberites domunculaGene Expression RegulationSuberitesSequence AlignmentSuberitesMolecular biology and evolution
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Disentangling phylogeography, polyploid evolution and taxonomy of a woodland herb (Veronica chamaedrys group, Plantaginaceae s.l.) in southeastern Eu…

2010

Southeastern Europe is a centre of European biodiversity, but very little is known about factors causing the observed richness. Here, we contribute to fill this gap by reconstructing the spatio-temporal diversification of the cytologically variable and taxonomically intricate complex of Veronica chamaedrys (Plantaginaceae s.l.), growing in open forests, forest edges and grasslands, with flow cytometry, molecular markers (AFLPs, plastid DNA sequences) and morphometry. Our results show that both diploid and tetraploid cytotypes are widespread, but diploids predominate on the southern Balkan Peninsula. Plastid sequences suggest a first split into three main lineages in the mid-Pleistocene and …

0106 biological sciencesGenome sizeAFLPBiodiversityWoodland010603 evolutionary biology01 natural sciencesArticlePolyploidyEvolution Molecular03 medical and health sciencesPolyploidSoutheastern Europeparasitic diseasesGeneticsPlantaginaceaeAmplified Fragment Length Polymorphism AnalysisMolecular BiologyPhylogenyEcology Evolution Behavior and Systematics030304 developmental biologyMorphometricsPlastid DNA0303 health sciencesbiologyEcologyVeronica chamaedrysfood and beveragesBalkan Peninsula15. Life on landbiology.organism_classificationClassificationVeronicaEuropePhylogeographyPhylogeographyTaxonomy (biology)Morphometricsgeographic locationsVeronica chamaedrysGenome PlantMolecular Phylogenetics and Evolution
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Reciprocal Interaction Matrix Reveals Complex Genetic and Dose-Dependent Specificity among Coinfecting Parasites

2012

Understanding genetic specificity in factors determining the outcome of host-parasite interactions is especially important as it contributes to parasite epidemiology, virulence, and maintenance of genetic variation. Such specificity, however, is still generally poorly understood. We examined genetic specificity in interactions among coinfecting parasites. In natural populations, individual hosts are often simultaneously infected by multiple parasite species and genotypes that interact. Such interactions could maintain genetic variation in parasite populations if they are genetically specific so that the relative fitness of parasite genotypes varies across host individuals depending on (1) t…

0106 biological sciencesGenotypeVirulence010603 evolutionary biology01 natural sciencesDiplostomum pseudospathaceumHost Specificity03 medical and health sciencesGenotypeGenetic variationmedicineParasite hostingAnimalsEcology Evolution Behavior and Systematics030304 developmental biologyGenetics0303 health sciencesbiologyHost (biology)CoinfectionGenetic Variationmedicine.diseasebiology.organism_classification3. Good healthOncorhynchus mykissCoinfectionTrematodaTrematodaAmerican Naturalist
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Evidence for a recent horizontal transmission and spatial spread of Wolbachia from endemic Rhagoletis cerasi (Diptera: Tephritidae) to invasive Rhago…

2013

The widespread occurrence of Wolbachia in arthropods and nematodes suggests that this intracellular, maternally inherited endosymbiont has the ability to cross species boundaries. However, direct evidence for such a horizontal transmission of Wolbachia in nature is scarce. Here, we compare the well-characterized Wolbachia infection of the European cherry fruit fly, Rhagoletis cerasi, with that of the North American eastern cherry fruit fly, Rhagoletis cingulata, recently introduced to Europe. Molecular genetic analysis of Wolbachia based on multilocus sequence typing and the Wolbachia surface protein wsp showed that all R. cingulata individuals are infected with wCin2 identical to wCer2 in …

0106 biological sciencesGenotypeZoologyRhagoletis cingulata010603 evolutionary biology01 natural sciencesGenetic analysisElectron Transport Complex IV03 medical and health sciencesTephritidaeGeneticsDisease Transmission InfectiousAnimalsEcology Evolution Behavior and Systematics030304 developmental biology0303 health sciencesbiologyEcologyHaplotypeTephritidaeGenetic VariationRhagoletis cerasibiology.organism_classification3. Good healthMultilocus sequence typingWolbachiaHorizontal transmissionWolbachiaBacterial Outer Membrane ProteinsMultilocus Sequence TypingMolecular ecology
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Prevalence of infection as a predictor of multiple genotype infection frequency in parasites with multiple-host life cycle.

2012

In nature, parasites commonly share hosts with other conspecific parasite genotypes. While adult parasites typically show aggregated distribution in their final hosts, aggregation of clonal parasite genotypes in intermediate hosts, such as those of trematodes in molluscs, is not generally known. However, infection of a host by multiple parasite genotypes has significant implications for evolution of virulence and host-parasite coevolution. Aggregated distribution of the clonal stages can increase host mortality and reduce larval output of each infecting genotype through interclonal competition, and therefore have significant implications for parasite epidemiology. The aim of this study was …

0106 biological sciencesGenotypemedia_common.quotation_subjectZoologySnailBiology010603 evolutionary biology01 natural sciencesCompetition (biology)Host-Parasite Interactions03 medical and health sciencesbiology.animalGenotypeParasite hostingAnimalsEcology Evolution Behavior and SystematicsFreshwater mollusc030304 developmental biologymedia_commonLymnaea0303 health sciencesHost (biology)Bayes Theorembiology.organism_classification3. Good healthAnimal ecologyAnimal Science and ZoologyTrematodaTrematodaMicrosatellite RepeatsThe Journal of animal ecology
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Interactive effects between diet and genotypes of host and pathogen define the severity of infection

2012

Host resistance and parasite virulence are influenced by multiple interacting factors in complex natural communities. Yet, these interactive effects are seldom studied concurrently, resulting in poor understanding of host-pathogen-environment dynamics. Here, we investigated how the level of opportunist pathogen virulence, strength of host immunity and the host condition manipulated via diet affect the survival of wood tiger moth Parasemia plantaginis (Arctidae). Larvae from “low cuticular melanin” and “high cuticular melanin” (considered as low and high pathogen resistance, respectively) selection lines were infected with moderately and highly virulent bacteria strains of Serratia marcescen…

0106 biological sciencesGenotype-environment interactionVirulenceLactucaBiology010603 evolutionary biology01 natural sciencesMicrobiologyMelanin03 medical and health sciencesImmunityParasemia plantaginisBotanyPathogenEcology Evolution Behavior and SystematicsSerratia marcescens030304 developmental biologyNature and Landscape ConservationOriginal Research11832 Microbiology and virology0303 health sciencesimmunokompetenssilleimmunocompetenceEcologyintegumentary systemHost (biology)fungivirulenssiPlantago majorbiology.organism_classificationvirulenceSerratia marcescensta1181Parasemia plantaginissense organsGenotyyppi-ympäristö vuorovaikutusEcology and Evolution
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Trends in marine survival of Atlantic salmon populations in eastern Canada

2021

Abstract Declines in wild Atlantic salmon (Salmo salar) abundance throughout the north Atlantic are primarily attributed to decreases in survival at sea. However, comparing trends in marine survival among populations is challenging as data on both migrating smolts and returning adults are sparse and models are difficult to parameterize due to their varied life histories. We fit a hierarchical Bayesian maturity schedule model to data from seven populations in eastern Canada to estimate numbers of out-migrating smolts, survival in the first and second year at sea, and the proportion returning after 1 year. Trends in survival at sea were not consistent among populations; we observe positive, n…

0106 biological sciencesGeographyEcology010604 marine biology & hydrobiologyAquatic ScienceOceanography010603 evolutionary biology01 natural sciencesEcology Evolution Behavior and SystematicsICES Journal of Marine Science
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Western Eurasian-western North American disjunct plant taxa: The dry-adapted ends of formerly widespread north temperate mesic lineages-and examples …

2012

0106 biological sciencesGeographyTaxonEcologyTemperate climateBiological dispersalPlant ScienceParallel evolutionDisjunct010603 evolutionary biology01 natural sciencesEcology Evolution Behavior and Systematics010606 plant biology & botanyTAXON
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The Effect of Echinorhynchus borealis (Acanthocephala) Infection on the Anti-Predator Behavior of a Benthic Amphipod

2008

In benthic habitats, predators can generally not be detected visually, so olfaction may be particularly important for inducing anti-predation behaviors in prey organisms. Manipulative parasites infecting benthic hosts could suppress these responses so as to increase the probability of predation and thus trophic transmission. We studied how infection with the acanthocephalan Echinorhynchus borealis affects the response of the benthic amphipod Pallasea quadrispinosa to water conditioned by burbot (Lota lota), the parasite's definitive host. In normal lake water, refuge use by infected and uninfected amphipods was similar, but when exposed to burbot-conditioned water, uninfected amphipods spen…

0106 biological sciencesGeologic SedimentsAmphipodaFresh Water010603 evolutionary biology01 natural sciencesPheromonesAcanthocephalaPredation03 medical and health sciencesAnimalsAmphipodaPredatorFinlandEcology Evolution Behavior and Systematics030304 developmental biologyTrophic level0303 health sciencesBehavior AnimalbiologyHost (biology)Ecologybiology.organism_classificationAdaptation PhysiologicalCrustaceanSmellGadiformesBenthic zonePredatory BehaviorParasitologyAcanthocephalaJournal of Parasitology
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