Search results for "Systematic"

showing 10 items of 7608 documents

Genomic Differentiation and Demographic Histories of Atlantic and Indo-Pacific Yellowfin Tuna (Thunnus albacares) Populations.

2017

Recent developments in the field of genomics have provided new and powerful insights into population structure and dynamics that are essential for the conservation of biological diversity. As a commercially highly valuable species, the yellowfin tuna (Thunnus albacares) is intensely exploited throughout its distribution in tropical oceans around the world, and is currently classified as near threatened. However, conservation efforts for this species have so far been hampered by limited knowledge of its population structure, due to incongruent results of previous investigations. Here, we use whole-genome sequencing in concert with a draft genome assembly to decipher the global population str…

0106 biological sciences0301 basic medicineYellowfin tunademographypopulation genomicsDemographic historyPopulation010603 evolutionary biology01 natural sciencesPopulation genomics03 medical and health sciencesGeneticseducationEcology Evolution Behavior and Systematicseducation.field_of_studyNear-threatened speciesbiologyconservationbiology.organism_classificationFishery030104 developmental biologyfisheries managementwhole-genome sequencingtunaTunahuman activitiesIndo-PacificThunnusResearch ArticleGenome biology and evolution
researchProduct

Curse of the black spot: spotting negatively correlates with fitness in black grouseLyrurus tetrix

2016

There is growing evidence that achromatic plumage can act as honest indicators of male quality. In some species with areas of white plumage, black melanin spots can be found on parts of the feathers. The functional significance of these spots and the relationship with male quality is yet poorly understood. We investigated the relationship between black melanin spots in an otherwise totally white ornament, the undertail covert, in relation to age, fitness and covariance with past and present expression of sexual traits, in the lekking black grouse Lyrurus tetrix. We found that spots at tips of feathers (tip spots) were negatively related to survival and reproductive success, and covaried neg…

0106 biological sciences0301 basic medicineZoologyBiology010603 evolutionary biology01 natural sciences03 medical and health sciencesLek matingoxidative stressEcology Evolution Behavior and SystematicsC300 ZoologylekkingSpotsReproductive successEcologyC182 Evolutionfood and beveragesBlack grousebiology.organism_classificationfeathersfitnessmelaninWhite (mutation)030104 developmental biologyPlumageFeathervisual_artvisual_art.visual_art_mediumta1181C100 BiologyAnimal Science and ZoologyachromaticBlack spotBehavioral Ecology
researchProduct

Shoaling with infected conspecifics does not improve resistance to trematode infection

2018

Group‐living animals can gain protection against parasitic infections through social contacts with previously infected conspecifics (social immunization). Recent research suggests that such protective effects can be induced through visual or chemical cues released by infected individuals, resulting in anticipatory immune upregulation among group members. Here, we study cue‐induced social resistance in rainbow trout Oncorhynchus mykiss exposed to a trematode parasite, the eye‐fluke Diplostomum pseudospathaceum. We established groups of naïve individuals (receivers) that were paired with previously infected individuals (donors) at different ratios of donors to receivers and at different time …

0106 biological sciences0301 basic medicineZoologyDiplostomum pseudospathaceumGroup living010603 evolutionary biology01 natural sciencesDiplostomum pseudospathaceum03 medical and health scienceskirjolohisocial immunizationloisetParasite hostingimmuniteettiryhmätEcology Evolution Behavior and SystematicsResistance (ecology)biologygroup livingShoaling and schoolingbiology.organism_classificationrainbow troutcue030104 developmental biologyparasiteta1181Animal Science and ZoologyRainbow trout
researchProduct

Gut microbiota of the pine weevil degrades conifer diterpenes and increases insect fitness

2017

AbstractThe pine weevil (Hylobius abietis), a major pest of conifer forests throughout Europe, feeds on the bark and cambium, tissues rich in terpenoid resins that are toxic to many insect herbivores. Here we report the ability of the pine weevil gut microbiota to degrade the diterpene acids of Norway spruce. The diterpene acid levels present in ingested bark were substantially reduced on passage through the pine weevil gut. This reduction was significantly less upon antibiotic treatment, and supplementing the diet with gut suspensions from untreated insects restored the ability to degrade diterpenes. In addition, cultured bacteria isolated from pine weevil guts were shown to degrade a Norw…

0106 biological sciences0301 basic medicineZoologyGut floracomplex mixtures010603 evolutionary biology01 natural sciences03 medical and health scienceschemistry.chemical_compoundSymbiosisBotanyGeneticsAnimalsHylobius abietisPiceaEcology Evolution Behavior and SystematicsbiologyHost (biology)Weevilfungibiology.organism_classificationGastrointestinal MicrobiomeEurope030104 developmental biologychemistryvisual_artvisual_art.visual_art_mediumWeevilsBarkGenetic FitnessDiterpenesDiterpeneBacteriaMolecular Ecology
researchProduct

When phenotypes fail to illuminate underlying genetic processes in fish and fisheries science

2019

Abstract Advances in genetic and genomic technologies have become widely available and have potential to provide novel insights into fish biology and fisheries science. In the present overview, we explore cases for which genomic analyses have proven instrumental in the rejection of hypotheses that have been well-motivated based on phenotypic and ecological properties of individuals and populations. We focus on study systems for which information derived using genomic tools contradicts conclusions drawn from traditional fisheries science methodologies and assumptions. We further illustrate the non-intuitive interplay of genomics and ecology in Atlantic salmon (Salmo salar L.) owing to the re…

0106 biological sciences0301 basic medicineadaptationAquatic ScienceBiologyeco-evolutionary dynamicskalastuksenhoitoOceanography010603 evolutionary biology01 natural sciencesatlantinlohi03 medical and health scienceskalakantojen hoitolife-history evolution14. Life underwaterEcology Evolution Behavior and SystematicsGenetic ProcessesFisheries scienceEcologykalakannatgenomiikkaPhenotypeFishery030104 developmental biologypopulaatiogenetiikkaFish <Actinopterygii>fenotyyppiICES Journal of Marine Science
researchProduct

Induction of radiata pine somatic embryogenesis at high temperatures provokes a long-term decrease in dna methylation/hydroxymethylation and differen…

2020

Based on the hypothesis that embryo development is a crucial stage for the formation of stable epigenetic marks that could modulate the behaviour of the resulting plants, in this study, radiata pine somatic embryogenesis was induced at high temperatures (23 &deg

0106 biological sciences0301 basic medicineanimal structuresSomatic embryogenesisSomatic cellheat shock proteinPlant Scienceepigenetics; 5-hydroxymethylcytosine; 5-methylcytosine; heat; heat shock protein; memory; Pinus radiata; priming; somatic embryo; somatic plantBiology01 natural sciencesArticleTranscriptomememory03 medical and health sciencessomatic embryoMemorylcsh:BotanyHeat shock proteinEpigenetics5-hydroxymethylcytosine5-methylcytosineprimingEcology Evolution Behavior and SystematicsPinus radiataHeat shock proteinEcologyepigeneticsEmbryogenesisfungiSomatic embryofood and beveragesMethylationHeat<i>Pinus radiata</i>lcsh:QK1-989Cell biologySomatic plant030104 developmental biologysomatic plantPrimingDNA methylationEpigeneticsheat010606 plant biology & botany
researchProduct

Parameterising a public good: how experiments on predation can be used to predict cheat frequencies

2016

Chemical defence is superficially easy to understand as a means for individuals to protect themselves from enemies. The evolution of chemical defence is however potentially complex because such defences may cause the generation of a public good, protecting members of the population as a whole as well as individuals that deploy toxins defensively. If a public good of protection exists, it may be exploited and degraded by “cheats” that do not invest in defence. This can in turn lead to complex frequency (and density) dependent effects in toxin evolution. To investigate this we used ecologically relevant predators (Great tits, Parus major) and examined how individual and public benefits vary d…

0106 biological sciences0301 basic medicineautomimicryCheatingPopulationmyrkyllisyyscheatingsosiaalinen vuorovaikutus010603 evolutionary biology01 natural sciencesPredation03 medical and health sciencesSet (psychology)educationEcology Evolution Behavior and SystematicsParuseducation.field_of_studychemical defencebiologyEcologyPublic goodbiology.organism_classificationSocial relation030104 developmental biologyfrequency dependenceAnimal ecologyEvolutionary Ecology
researchProduct

Female sexual signaling in a capital breeder, the European glow-worm Lampyris noctiluca

2021

AbstractTheory predicts that because costs constrain female sexual signaling, females are expected to have a low signaling effort that is increased with passing time until mating is secured. This pattern of signaling is expected to result from females balancing the costs associated with a higher than optimal signaling effort and those costs associated with a low signaling effort that increase the likelihood of delayed mating. We tested whether this prediction applies in the common glow-worm Lampyris noctiluca (Coleoptera, Lampyridae), a capital breeding species in which females glow at night to attract males. Contrary to predictions, we found that the duration of female sexual signaling sig…

0106 biological sciences0301 basic medicineaviationSexual signaling costsFemale sexual selectioneläinten käyttäytyminen010603 evolutionary biology01 natural sciences03 medical and health sciencessignaalitLampyridaeMatingEcology Evolution Behavior and SystematicsCapital breedinglisääntymiskäyttäytyminen030102 biochemistry & molecular biologybiologyFemale sexual signalingbiology.organism_classificationBreeder (cellular automaton)aviation.aircraft_modelsukupuolivalintaAnimal ecologyInsect ScienceCapital (economics)kiiltomadotLampyris noctilucaLampyris noctilucaLampyridaeDemography
researchProduct

Taxonomic status and epidemiology of the mesoparasitic copepod Pennella balaenoptera in cetaceans from the western Mediterranean.

2018

Pennella balaenoptera is a mesoparasitic copepod that has been reported in at least 17 cetacean species. Subtle morphological differences in the first antennae of adult females have been used to discriminate this species from P. filosa, a species infecting fishes. Other morphological traits are unreliable because of their high plasticity, and no molecular data are available to confirm the taxonomic status of P. balaenoptera as an independent species. We found no consistent morphological differences of the first antennae between P. balaenoptera and P. filosa collected from cetaceans and fish in the western Mediterranean. Molecular data on the mitochondrial cytochrome oxidase subunit I failed…

0106 biological sciences0301 basic medicinebiologyBalaenopteraRange (biology)ZoologyEctoparasitic InfestationsAquatic Sciencebiology.organism_classificationBottlenose dolphin010603 evolutionary biology01 natural sciencesZiphius cavirostrisCopepoda03 medical and health sciencesBeaked whaleMonophyly030104 developmental biologyPennellaMediterranean SeaAnimalsCetaceaEcology Evolution Behavior and SystematicsCopepodDiseases of aquatic organisms
researchProduct

Phylogeny, biogeography, and chromosome evolution of the amphitropical genus Grindelia (Asteraceae) inferred from nuclear ribosomal and chloroplast s…

2012

0106 biological sciences0301 basic medicinebiologyBiogeographyChromosomePlant ScienceRibosomal RNAAsteraceaebiology.organism_classification010603 evolutionary biology01 natural sciences03 medical and health sciences030104 developmental biologyGrindeliaGenusPhylogeneticsEvolutionary biologyMolecular phylogeneticsEcology Evolution Behavior and SystematicsTAXON
researchProduct