Search results for "Systematics"

showing 10 items of 6702 documents

Lactobacillus uvarum sp. nov. - A new lactic acid bacterium isolated from Spanish Bobal grape must

2008

Five strains isolated from grape musts in Spain in 1997, have been characterized by several molecular techniques, and three of them have been identified as pertaining to a new species. All strains are Gram-positive rods, aerotolerant and homofermentative bacteria that do not exhibit catalase activity. Phylogenetic analysis based on 16S rRNA gene sequences placed these strains within the genus Lactobacillus, closely related to Lactobacillus mali. DNA-DNA hybridization experiments confirmed that strain 71 belongs to the lately described species L. satsumensis, strain 88 belongs to L. mali and the other three isolates have an independent status at species level. Restriction analysis of the amp…

MustMolecular Sequence DataWineBiologyApplied Microbiology and BiotechnologyMicrobiologyRibotypingMicrobiologyRibotypingARDRAPhylogeneticsRAPDLactobacillusRNA Ribosomal 16SGenotypeVitisISR16S rRNALactobacillus uvarum sp. nov.Ecology Evolution Behavior and SystematicsPhylogenyPlant DiseasesGeneticsPhylogenetic treefood and beveragesRibosomal RNA16S ribosomal RNAbiology.organism_classificationRAPDRandom Amplified Polymorphic DNA TechniqueLactobacillusPhenotypeGenes BacterialSpainCarbohydrate MetabolismDNA IntergenicWinemaking
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Coordinate overexpression of two RND efflux systems, ParXY and TtgABC , is responsible for multidrug resistance in Pseudomonas putida

2020

Resistance Nodulation cell Division (RND) efflux pumps are known to contribute to the tolerance of Pseudomonas putida to aromatic hydrocarbons, but their role in antibiotic resistance has not been fully elucidated. In this study, two types of single-step multidrug-resistant (MDR) mutants were selected in vitro from reference strain KT2440. Mutants of the first type were more resistant to fluoroquinolones and β-lactams except imipenem, and overproduced the efflux system TtgABC as a result of mutations occurring in regulator TtgR. In addition to TtgABC, mutants of the second type such as HPG-5 were found to upregulate a novel RND pump, dubbed ParXY/TtgC, which accommodates cefepim, fluoroquin…

MutantGlyoxylate cycleMicrobial Sensitivity Testsmedicine.disease_causeMicrobiologyMicrobiology03 medical and health sciencesAntibiotic resistanceBacterial ProteinsDrug Resistance Multiple BacterialmedicineGeneEcology Evolution Behavior and SystematicsComputingMilieux_MISCELLANEOUS030304 developmental biology0303 health sciencesMutationbiology030306 microbiologyPseudomonas putidaMembrane Transport ProteinsBiological TransportGene Expression Regulation Bacterialbiology.organism_classificationPseudomonas putidaAnti-Bacterial AgentsMultiple drug resistance[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyMutationEffluxCell Division
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Functional analysis of endo-1,4-β-glucanases in response to Botrytis cinerea and Pseudomonas syringae reveals their involvement in plant-pathogen int…

2013

Plant cell wall modification is a critical component in stress responses. Endo-1,4-β-glucanases (EGs) take part in cell wall editing processes, e.g. elongation, ripening and abscission. Here we studied the infection response of Solanum lycopersicum and Arabidopsis thaliana with impaired EGs. Transgenic TomCel1 and TomCel2 tomato antisense plants challenged with Pseudomonas syringae showed higher susceptibility, callose priming and increased jasmonic acid pathway marker gene expression. These two EGs could be resistance factors and may act as negative regulators of callose deposition, probably by interfering with the defence-signalling network. A study of a set of Arabidopsis EG T-DNA insert…

Mutantendo-glucanasesArabidopsisGene ExpressionPseudomonas syringaePlant ScienceCyclopentanestomatoGenes PlantMarker genechemistry.chemical_compoundBotrytis cinereaCellulaseSolanum lycopersicumPlant Growth RegulatorsCell WallGene Expression Regulation PlantArabidopsisBotanyPseudomonas syringaeArabidopsis thalianaOxylipinsGlucansEcology Evolution Behavior and SystematicsBotrytis cinereaDisease ResistancePlant DiseasesPlant ProteinsbiologyJasmonic acidCallosefungifood and beveragesGeneral Medicinebiology.organism_classificationdefence responseCell biologychemistryHost-Pathogen Interactionscell wallBotrytisSignal TransductionPlant biology (Stuttgart, Germany)
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The effect of genetic robustness on evolvability in digital organisms

2008

Abstract Background Recent work has revealed that many biological systems keep functioning in the face of mutations and therefore can be considered genetically robust. However, several issues related to robustness remain poorly understood, such as its implications for evolvability (the ability to produce adaptive evolutionary innovations). Results Here, we use the Avida digital evolution platform to explore the effects of genetic robustness on evolvability. First, we obtained digital organisms with varying levels of robustness by evolving them under combinations of mutation rates and population sizes previously shown to select for different levels of robustness. Then, we assessed the abilit…

Mutation rateGenetic robustnessDigital organismsGenotypeEvolutionUNESCO::CIENCIAS DE LA VIDA::Otras especialidades de la biologíaPopulationAdaptation BiologicalEvolutionary innovationsBiologyEvolution MolecularQH359-425Computer SimulationSelection GeneticeducationEcology Evolution Behavior and Systematicseducation.field_of_studyGenetic diversityAnalysis of VarianceModels GeneticRobustness (evolution)EvolvabilityGenetic robustness; Digital organisms; Evolutionary innovationsGenetics PopulationPhenotypeEvolutionary biologyMutationTraitRna foldingAvida:CIENCIAS DE LA VIDA::Otras especialidades de la biología [UNESCO]Research ArticleBMC Evolutionary Biology
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Chloroplast DNA and isozyme analysis of the progenitor-derivative species relationship between Senecio nebrodensis and S. viscosus (Asteraceae )

1995

A comparison of chloroplast DNA (cpDNA) and isozyme diversity in Senecio nebrodensis L., a species restricted to certain mountain ranges in Spain, and S. viscosus L., a widespread ruderal species in Europe, revealed that S. viscosus possessed the more common of two cpDNA haplotypes resolved in S. nebrodensis and contained only a small subset of the alleles found in S. nebrodensis at enzyme coding loci. The two species shared one restriction length mutation and one site mutation in their cpDNA, which distinguished them from other European Senecio species examined previously. Taken overall, these results support the hypothesis that S. nebrodensis and S. viscosus are related as a progenitor-de…

MutationbiologyHaplotypePlant ScienceSenecioAsteraceaemedicine.disease_causebiology.organism_classificationIsozymestomatognathic diseasesChloroplast DNABotanyGeneticsmedicineRuderal speciesAlleleEcology Evolution Behavior and SystematicsAmerican Journal of Botany
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Nest mounds of red wood ants ( Formicaaquilonia ): hot spots for litter-dwelling earthworms

2017

A previously undocumented association between earthworms and red wood ants (Formicaaquilonia Yarr.) was found during an investigation of the influence of wood ants on the distribution and abundance of soil animals in boreal forest soil. Ant nest mounds and the surrounding soil of the ant territories were sampled. The ant nest mound surface (the uppermost 5-cm layer) harboured a much more abundant earthworm community than the surrounding soil; the biomass of the earthworms was about 7 times higher in the nests than in the soil. Dendrodrilusrubidus dominated the earthworm community in the nests, while in soils Dendrobaenaoctaedra was more abundant. Favorable temperature, moisture and pH (Ca c…

Mutualism (biology)Dendrodrilus rubidusAculeataNestbiologyEcologyEarthwormHymenopteraAnt colonybiology.organism_classificationEcology Evolution Behavior and SystematicsPredationOecologia
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Short seed-dispersal distances and low seedling recruitment in farmland populations of bird-dispersed cherry trees

2012

Summary In Central Europe, many plant populations are patchily distributed in human-modified landscapes and depend on animal vectors for seed dispersal. To predict seed-dispersal distances and locations of seeds of wild cherry trees (Prunus avium L.) in forest and farmland habitats in a human-modified landscape, we integrate movement data and seed regurgitation times of the Common Blackbird (Turdus merula L.) in a simulation model. We performed feeding trials with Common Blackbirds and wild cherries to determine the distribution of regurgitation times. We captured 32 male blackbirds and equipped them with radio tags to follow their movements in forest and farmland habitats. To simulate the …

Mutualism (biology)EcologyEcologySeed dispersalForagingfood and beveragesPlant ScienceBiologybiology.organism_classificationPrunusHabitatSeedlingPlant speciesBiological dispersalEcology Evolution Behavior and SystematicsJournal of Ecology
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Sex-specific interaction between arbuscular mycorrhizal and dark septate fungi in the dioecious plant Antennaria dioica (Asteraceae).

2012

Male and female plants of dioecious species often differ in their resource demands and this has been linked to secondary sexual dimorphism, including sex-specific interactions with other organisms such as herbivores and pollinators. However, little is known about the interaction between dioecious plants and fungal root endophytes. Plants may be simultaneously colonised by arbuscular mycorrhizal (AM) and dark septate (DS) fungi. While it is well established that AM mutualism involves reciprocal transfer of photosynthates and mineral nutrients between roots of host plants and these fungi, the role of DS fungi remains controversial. Here, we report the temporal and spatial variation in AM and …

Mutualism (biology)HerbivoreDioecyfungifood and beveragesAntennaria dioicaPlant ScienceGeneral MedicineBiologyAsteraceaeAsteraceaebiology.organism_classificationPlant RootsSexual dimorphismColonisationPollinatorMycorrhizaeBotanySymbiosisEcology Evolution Behavior and SystematicsFinlandSoil MicrobiologyPlant biology (Stuttgart, Germany)
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Lasius niger ants discriminate aphids based on their cuticular hydrocarbons

2011

Mutualistic interactions between organisms depend on the ability of each partner to recognize the other. In ant–aphid mutualisms, ants have to recognize whether an aphid colony is worth tending. Many aphid species can live in mutualistic associations with ants (trophobiosis), whereas others are never tended and are frequently preyed upon by ants. Since aphids often produce low amounts of honeydew when not tended by ants, the ants should be able to recognize potential trophobionts based on signals other than honeydew. Conversely, aphids should signal if they are potential trophobionts. We investigated whether ants recognize potential trophobiont aphids based on their behaviour, morphological…

Mutualism (biology)HoneydewAphidbiologyLasiusBotanyAnimal Science and ZoologyTrophobiosisbiology.organism_classificationChemical communicationEcology Evolution Behavior and SystematicsMyrmecophilyPredationAnimal Behaviour
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Under my wing: lesser kestrels and jackdaws derive reciprocal benefits in mixed-species colonies

2011

In mixed-species assemblages, antipredator benefits for a timid species nesting close to a more pugnacious one are often reported. Advantages for the protected species are usually manifested in terms of higher reproductive success than conspecifics nesting remote to the protector species. Whether the protector species also accrues any benefit remains untested, and the species-specific behavioral traits underlying enhanced reproductive output in mixed-species associations remain poorly documented. We studied associations between lesser kestrels (Falco naumanni) and jackdaws (Corvus monedula) nesting in rural buildings in the Gela Plain (Italy). We tested for interspecific interactions of jac…

Mutualism (biology)biologyReproductive successantipredator behavior Corvus monedula Falco naumanni information transfer interspecific interactions mutualism predator protection vigilance.EcologySettore BIO/05 - ZoologiaFalco naumanniInterspecific competitionbiology.organism_classificationPredationVigilance (behavioural ecology)NestAnimal Science and ZoologyPredatorEcology Evolution Behavior and SystematicsBehavioral Ecology
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