Search results for "Theoretical Computer Science"

showing 10 items of 1151 documents

Statistically validated networks in bipartite complex systems.

2011

Many complex systems present an intrinsic bipartite nature and are often described and modeled in terms of networks [1-5]. Examples include movies and actors [1, 2, 4], authors and scientific papers [6-9], email accounts and emails [10], plants and animals that pollinate them [11, 12]. Bipartite networks are often very heterogeneous in the number of relationships that the elements of one set establish with the elements of the other set. When one constructs a projected network with nodes from only one set, the system heterogeneity makes it very difficult to identify preferential links between the elements. Here we introduce an unsupervised method to statistically validate each link of the pr…

Theoretical computer scienceComputer sciencelcsh:MedicineNetwork theorySocial and Behavioral SciencesBioinformaticsQuantitative Biology - Quantitative MethodsSociologyProtein Interaction Mappinglcsh:ScienceQuantitative Methods (q-bio.QM)MultidisciplinarySystems BiologyApplied MathematicsPhysicsStatisticsComplex SystemsGenomicsLink (geometry)Social NetworksSpecialization (logic)Interdisciplinary PhysicsBipartite graphProbability distributionResearch ArticleNetwork analysisPhysics - Physics and SocietyComplex systemFOS: Physical sciencesPhysics and Society (physics.soc-ph)Type (model theory)BiologyModels BiologicalNetwork theory Statistical PhysicsStatistical MechanicsSet (abstract data type)Statistical MethodsBiologyStructure (mathematical logic)Statistical Physicslcsh:RComputational BiologyModels TheoreticalComparative GenomicsSettore FIS/07 - Fisica Applicata(Beni Culturali Ambientali Biol.e Medicin)FOS: Biological sciencesNetwork theorylcsh:QNull hypothesisMathematicsPLoS ONE
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Gl-learning

2016

In this paper, we present a new open-source software library, Gl-learning, for grammatical inference. The rise of new application scenarios in recent years has required optimized methods to address knowledge extraction from huge amounts of data and to model highly complex systems. Our library implements the main state-of-the-art algorithms in the grammatical inference field (RPNI, EDSM, L*), redesigned through the OpenMP library for a parallel execution that drastically decreases execution times. To our best knowledge, it is also the first comprehensive library including a noise tolerance learning algorithm, such as Blue*, that significantly broadens the range of the potential application s…

Theoretical computer scienceComputer sciencemedia_common.quotation_subjectParallel algorithm0102 computer and information sciences02 engineering and technologycomputer.software_genre01 natural sciencesField (computer science)Grammatical inferenceSoftwareKnowledge extractionSoftware library0202 electrical engineering electronic engineering information engineering1707media_commonSettore ING-INF/05 - Sistemi Di Elaborazione Delle InformazioniGrammarbusiness.industryProgramming languageModular designGrammar inductionHuman-Computer InteractionParallel algorithmRange (mathematics)Computer Networks and Communication010201 computation theory & mathematics020201 artificial intelligence & image processingbusinesscomputerSoftwareProceedings of the 17th International Conference on Computer Systems and Technologies 2016
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Rough Sets and Vague Sets

2007

The subject-matter of the consideration touches the problem of vagueness. The notion of the rough set, originated by Zdzislaw Pawlak, was constructed under the influence of vague information and methods of shaping systems of notions leading to conceptualization and representation of vague knowledge, so also systems of their scopes as some vague sets. This paper outlines some direction of searching for a solution to this problem. In the paper, in connection to the notion of the rough set, the notion of a vague set is introduced. Some operations on these sets and their properties are discussed. The considerations intend to take into account a classical approach to reasoning, based on vague pr…

Theoretical computer scienceConceptualizationClassical logicComputingMilieux_LEGALASPECTSOFCOMPUTINGVaguenessRepresentation (arts)Rough setVague setAlgorithmConnection (mathematics)Mathematics
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Increasing the Inference and Learning Speed of Tsetlin Machines with Clause Indexing

2020

The Tsetlin Machine (TM) is a machine learning algorithm founded on the classical Tsetlin Automaton (TA) and game theory. It further leverages frequent pattern mining and resource allocation principles to extract common patterns in the data, rather than relying on minimizing output error, which is prone to overfitting. Unlike the intertwined nature of pattern representation in neural networks, a TM decomposes problems into self-contained patterns, represented as conjunctive clauses. The clause outputs, in turn, are combined into a classification decision through summation and thresholding, akin to a logistic regression function, however, with binary weights and a unit step output function. …

Theoretical computer scienceContextual image classificationArtificial neural networkLearning automataComputer scienceSentiment analysisSearch engine indexingPattern recognition (psychology)OverfittingMNIST database
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ENFORCEMENT OF INTER-TASK DEPENDENCIES IN WORKFLOWS, CHARACTERIZATION AND PARADIGM

1998

Workflow techniques have gained a lot of attention as a means to support advanced business applications such as cooperative information systems and process re-engineering but also as a means to integrate legacy systems. Inter-task dependencies, described separately from the other parts of the workflow, have been recognized as a valuable method in describing certain restrictions on the executions of workflows. In this paper, we study the issue of pre-analysing and enforcing inter-task dependencies. The protocol and the theory behind it are presented, along with examples and discussions on ways to improve the performance. The idea is to present the meaning of a dependency through an automato…

Theoretical computer scienceCorrectnessDependency (UML)Event (computing)Computer scienceProgramming languageLegacy systemcomputer.software_genreComputer Science ApplicationsAutomatonTask (project management)Dependency theory (database theory)WorkflowcomputerInformation SystemsInternational Journal of Cooperative Information Systems
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Fragtique: Applying an OO Database Distribution Strategy to Data Warehouse

2001

We propose a strategy for distribution of a relational data warehouse organized according to a star schema. We adapt fragmentation and allocation strategies that were developed for OO databases. We split the most-often-accessed dimension table into fragments by using primary horizontal fragmentation. The derived fragmentation then divides the fact table into fragments. Other dimension tables are not fragmented since they are presumed to be sufficiently small. Allocation of fragments encompasses duplication of non-fragmented dimension tables that we call a closure.

Theoretical computer scienceDatabaseComputer scienceRelational databaseFragmentation (computing)Dimension tableA* search algorithmFact tablecomputer.software_genreData warehouselaw.inventionData cubelawSchema (psychology)Data miningcomputer
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Invisible Graffiti on Your Buildings: Blind and Squaring-Proof Watermarking of Geographical Databases

2007

Due to the ease of digital copy, watermarking is crucial to protect the intellectual property of rights owners. We propose an effective watermarking method for vectorial geographical databases, with the focus on the buildings layer. Embedded watermarks survive common geographical filters, including the essential squaring and simplification transformations, as well as deliberate removal attempts, e.g. by noise addition, cropping or over-watermarking. Robustness against the squaring transformation is not adressed by existing approaches. The impact on the quality of the datasets, defined as a composition of point accuracy and angular quality, is assessed through an extensive series of experime…

Theoretical computer scienceDatabaseOrientation (computer vision)CentroidComputingMilieux_LEGALASPECTSOFCOMPUTINGcomputer.software_genreTransformation (function)Robustness (computer science)Noise (video)Focus (optics)Quantization (image processing)computerDigital watermarkingMathematics
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Random Tanglegram Partitions (Random TaPas): An Alexandrian Approach to the Cophylogenetic Gordian Knot

2018

Abstract Symbiosis is a key driver of evolutionary novelty and ecological diversity, but our understanding of how macroevolutionary processes originate extant symbiotic associations is still very incomplete. Cophylogenetic tools are used to assess the congruence between the phylogenies of two groups of organisms related by extant associations. If phylogenetic congruence is higher than expected by chance, we conclude that there is cophylogenetic signal in the system under study. However, how to quantify cophylogenetic signal is still an open issue. We present a novel approach, Random Tanglegram Partitions (Random TaPas) that applies a given global-fit method to random partial tanglegrams of …

Theoretical computer scienceDegree (graph theory)Phylogenetic treeComputer scienceContext (language use)Recursive partitioningVariation (game tree)BiologyClassificationModels BiologicalKnot (unit)CospeciationCongruence (geometry)Extant taxonPhylogeneticsGeneticsAnimalsComputer SimulationSymbiosisPhylogenySoftwareEcology Evolution Behavior and SystematicsCoevolutionSystematic Biology
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Supervised learning of time-independent Hamiltonians for gate design

2018

We present a general framework to tackle the problem of finding time-independent dynamics generating target unitary evolutions. We show that this problem is equivalently stated as a set of conditions over the spectrum of the time-independent gate generator, thus transforming the task to an inverse eigenvalue problem. We illustrate our methodology by identifying suitable time-independent generators implementing Toffoli and Fredkin gates without the need for ancillae or effective evolutions. We show how the same conditions can be used to solve the problem numerically, via supervised learning techniques. In turn, this allows us to solve problems that are not amenable, in general, to direct ana…

Theoretical computer scienceDiagonalFOS: Physical sciencesGeneral Physics and AstronomyInverseToffoli gate02 engineering and technologysupervised learning01 natural sciencesUnitary statequantum computingSettore FIS/03 - Fisica Della Materia010305 fluids & plasmasSet (abstract data type)Computer Science::Hardware Architecturesymbols.namesakeComputer Science::Emerging Technologiesquant-ph020204 information systems0103 physical sciences0202 electrical engineering electronic engineering information engineering010306 general physicsEigenvalues and eigenvectorsQuantum computerMathematicsPhysicsFlexibility (engineering)Discrete mathematicsQuantum PhysicsSupervised learningInverse problemHermitian matrixmachine learningQubitsymbolsPairwise comparisonquantum circuitsQuantum Physics (quant-ph)Hamiltonian (quantum mechanics)Generator (mathematics)Quantum Information and Measurement (QIM) V: Quantum Technologies
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Distributed Consensus on Boolean Information

2009

Abstract In this paper we study the convergence towards consensus on information in a distributed system of agents communicating over a network. The particularity of this study is that the information on which the consensus is seeked is not represented by real numbers, rather by logical values or sets. Whereas the problems of allowing a network of agents to reach a consensus on logical functions of input events, and that of agreeing on set–valued information, have been separately addressed in previous work, in this paper we show that these problems can indeed be attacked in a unified way in the framework of Boolean distributed information systems. Based on a notion of contractivity for Bool…

Theoretical computer scienceDynamical systems theoryAnd-inverter graphConsensus theoremGeneral Medicinedistributed estimationUniform consensusBoolean networkSettore ING-INF/04 - AutomaticaConsensusInformation systemBoolean dynamics systemBoolean consensus algorithmStandard Boolean modelMathematics
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