Search results for "Tomàquets"

showing 6 items of 6 documents

European traditional tomatoes galore: a result of farmers' selection of a few diversity-rich loci

2022

A comprehensive collection of 1254 tomato accessions, corresponding to European traditional and modern varieties, early domesticated varieties, and wild relatives, was analyzed by genotyping by sequencing. A continuous genetic gradient between the traditional and modern varieties was observed. European traditional tomatoes displayed very low genetic diversity, with only 298 polymorphic loci (95% threshold) out of 64 943 total variants. European traditional tomatoes could be classified into several genetic groups. Two main clusters consisting of Spanish and Italian accessions showed higher genetic diversity than the remaining varieties, suggesting that these regions might be independent seco…

LDQTLPhysiologySLCFruit morphologyMicrobiologiaPlant SciencePortes-lès-ValenceSLLquantitative trait locusSolanum lycopersicumsingle nucleotide polymorphismCrop evolution; diversification; fruit morphology; genome-wide association study; genotyping by sequencing; selection; single nucleotide polymorphismGWASLSLSolanum pimpinellifolium HM ClauseCrop evolutionFarmersSPSolanum lycopersicum var. cerasiformeTomàquets--Conreuminimum allele frequencyMAFPhenotypeDiversificationGenotyping by sequencinglong shelf-lifeGenome-wide association studydiversificationSNPselectionprincipal coordinate analysesGBSFrance Crop evolutionPolymorphism Single Nucleotidegenotyping by sequencingLife ScienceHumansPCoA:Enginyeria agroalimentària::Agricultura::Producció vegetal [Àrees temàtiques de la UPC]SelectionAllelesfruit morphologyGenetic VariationEcologia[SDV.BV.AP]Life Sciences [q-bio]/Vegetal Biology/Plant breedingPlant BreedingSolanum lycopersicum L. var. lycopersicumlinkage disequilibriumTomatoes--VarietiesGenome-Wide Association StudyJ Exp Bot
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The Histone Marks Signature in Exonic and Intronic Regions Is Relevant in Early Response of Tomato Genes to Botrytis cinerea and in miRNA Regulation

2020

Research into the relationship between epigenetic regulation and resistance to biotic stresses provides alternatives for plant protection and crop improvement. To unravel the mechanisms underlying tomato responses to Botrytis cinerea, we performed a chromatin immunoprecipitation (ChIP) analysis showing the increase in H3K9ac mark along the early induced genes SlyDES, SlyDOX1, and SlyLoxD encoding oxylipin-pathway enzymes, and SlyWRKY75 coding for a transcriptional regulator of hormonal signaling. This histone mark showed a more distinct distribution than the previously studied H3K4me3. The RNAPol-ChIP analysis reflected the actual gene transcription associated with increased histone modific…

0106 biological sciences0301 basic medicinePseudomonas syringaeMiRNA bindingPlant ScienceBiology<i>pseudomonas syringae</i>01 natural sciencesTomato03 medical and health sciencesBotrytis cinerealcsh:BotanyTomàquetsTranscriptional regulationEpigeneticsGeneEcology Evolution Behavior and SystematicsBotrytis cinereamiRNAGeneticsEcologyHistone modificationsfungifood and beveragesFongs patògensbiology.organism_classificationChromatin immunoprecipitationlcsh:QK1-989030104 developmental biologyHistone<i>botrytis cinerea</i>biology.proteinRNAH3K4me3EpigeneticsChromatin immunoprecipitation010606 plant biology & botany
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Identification of Stress Associated microRNAs in Solanum lycopersicum by High-Throughput Sequencing

2019

Tomato (Solanum lycopersicum) is one of the most important crops around the world and also a model plant to study response to stress. High-throughput sequencing was used to analyse the microRNA (miRNA) profile of tomato plants undergoing five biotic and abiotic stress conditions (drought, heat, P. syringae infection, B. cinerea infection, and herbivore insect attack with Leptinotarsa decemlineata larvae) and one chemical treatment with a plant defence inducer, hexanoic acid. We identified 104 conserved miRNAs belonging to 37 families and we predicted 61 novel tomato miRNAs. Among those 165 miRNAs, 41 were stress-responsive. Reverse transcription quantitative PCR (RT-qPCR) was used to valida…

0106 biological sciences0301 basic medicineEstrèslcsh:QH426-470ATP-binding cassette transporter01 natural sciencesbehavioral disciplines and activitiesDNA sequencingdifferential expression03 medical and health sciencesDifferential expressionSolanum lycopersicummicroRNAGeneticsTomàquetsGeneGenetics (clinical)Abiotic componentGeneticsbiotic and abiotic stress responseHigh-throughput sequencingbiologyAbiotic stressfungi<i>Solanum lycopersicum</i>food and beverageshigh-throughput sequencingbiology.organism_classificationlcsh:Genetics030104 developmental biologyReal-time polymerase chain reactionmiRNAsBiotic and abiotic stress responseSolanumHexanoic acidhexanoic acidmiRNA targets010606 plant biology & botanyGenes
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Tomato sauce enriched with olive oil exerts greater effects on cardiovascular disease risk factors than raw tomato and tomato sauce: a randomized tri…

2016

Epidemiological studies have observed a negative association between tomato intake and the incidence of cardiovascular disease. As tomato sauces are usually cooked with the addition of oil, some studies have pointed out that both processes may increase the bioavailability of the bioactive compounds. However, the effect of consumption of raw tomatoes and tomato sauces on inflammation biomarkers and adhesion molecules related to atherosclerosis remains unknown. The aim of this study was to test the postprandial effects of a single dose of raw tomatoes (RT), tomato sauce (TS) and tomato sauce with refined olive oil (TSOO) on cardiovascular disease risk factors. We performed an open, prospectiv…

0301 basic medicineMaleTime FactorsLymphocyteCD36postprandial030204 cardiovascular system & hematologytomatochemistry.chemical_compound0302 clinical medicineSolanum lycopersicumRisk FactorsTomàquetsFood scienceCookingProspective StudiesProspective cohort studyNutrition and DieteticsCross-Over Studiesbiologycardiovascularcookedfood and beveragesPostprandial PeriodLipidsInflamaciótomato; postprandial; cardiovascular; cooked; food matrix; bioavailabilityOli d'olivaPostprandialmedicine.anatomical_structureCardiovascular diseasesEstudi de casosCardiovascular DiseasesFemaleInflammation Mediatorslcsh:Nutrition. Foods and food supplyNutritive ValueAdultAdolescentlcsh:TX341-641Article03 medical and health sciencesYoung AdultTomatoesmedicineHumansSugarOlive OilInflammation030109 nutrition & dieteticsCholesterolbusiness.industryMalalties cardiovascularsProtective FactorsCrossover studyBioavailabilityDietchemistrySpainFruitbiology.proteinCase studiesbusinessEnergy IntakebioavailabilityCell Adhesion MoleculesBiomarkersfood matrixOlive oilFood Science
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Identification and molecular characterization of the high-affinity copper transporters family in Solanum lycopersicum

2021

Copper (Cu) plays a key role as cofactor in the plant proteins participating in essential cellular processes, such as electron transport and free radical scavenging. Despite high-affinity Cu transporters (COPTs) being key participants in Cu homeostasis maintenance, very little is known about COPTs in tomato (Solanum lycopersicum) even though it is the most consumed fruit worldwide and this crop is susceptible to suboptimal Cu conditions. In this study, a six-member family of COPT (SlCOPT1-6) was identified and characterized. SlCOPTs have a conserved architecture consisting of three transmembrane domains and β-strains. However, the presence of essential methionine residues, a methionine-enri…

0106 biological sciencesATPaseBiotecnologia agrícolaMolecular ConformationGene ExpressionCOPT01 natural sciencesBiochemistryTomatoStructure-Activity Relationship03 medical and health scienceschemistry.chemical_compoundCopper Transport ProteinsSolanum lycopersicumStructural BiologyGene expressionTomàquetsAmino Acid SequenceHeavy metal stressMolecular BiologyConserved SequencePhylogenyPlant Proteins030304 developmental biology0303 health sciencesMethioninebiologyChemistryfood and beveragesGeneral MedicinePeroxisomeYeastComplementationTransmembrane domainBiochemistryMultigene Familybiology.proteinCopper010606 plant biology & botanyCysteineInternational Journal of Biological Macromolecules
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Expression of miR159 Is Altered in Tomato Plants Undergoing Drought Stress.

2019

In a scenario of global climate change, water scarcity is a major threat for agriculture, severely limiting crop yields. Therefore, alternatives are urgently needed for improving plant adaptation to drought stress. Among them, gene expression reprogramming by microRNAs (miRNAs) might offer a biotechnologically sound strategy. Drought-responsive miRNAs have been reported in many plant species, and some of them are known to participate in complex regulatory networks via their regulation of transcription factors involved in water stress signaling. We explored the role of miR159 in the response of Solanum lycopersicum Mill. plants to drought stress by analyzing the expression of sly-miR159 and …

0106 biological sciences0301 basic medicineMYB transcription factorsSequeresDrought tolerance<i>P5CS</i>Plant Sciencedrought01 natural sciencesArticle03 medical and health sciencesSolanum lycopersicumGene expressionTomàquetsColorado potato beetleputrescineMYBprolineTranscription factorEcology Evolution Behavior and SystematicsEcologybiologybusiness.industryColorado potato beetle<i>Solanum lycopersicum</i>fungiBotanyfood and beveragesP5CSbiology.organism_classificationmiR159Biotechnology030104 developmental biologyQK1-989RNASolanumbusinessTranscription Factor GeneSolanaceae010606 plant biology & botanyPlants (Basel, Switzerland)
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