Search results for "Transcript"

showing 10 items of 3476 documents

Persistance et adaptation de Listeria monocytogenes dans le sol : rôle du système de communication Agr

2014

Listeria monocytogenes is a ubiquitous bacterium responsible for listeriosis, a food-borne disease. This pathog•en has been isolated from varions environments of which the telluric environment. The presence of L. monocytogenes in soi! can increase health hazards due to the risk of transfer to vegetables, animais and animal products and water. Considering the role of soil in the circulation of pathogens from fann environment to plant and animal products and eventually to foodstuff, it is critical to identify intrinsic and extrinsic factors that drive the fate of L. monocytogenes in soi!. Genome-wide and transcriptomic analyses found that an important part of the genome of L. monocytogenes (7…

persistance[SDV] Life Sciences [q-bio][SDE] Environmental Sciencessolcommunicationrégulation transcriptionnellesystème Agr.adaptationListeria monocytognes
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Transcriptional study of photoperiodic response in aphids and characterization of candidate photoperiodic photoreceptors

2020

Acyrthosiphon pisum es una especie de pulgón altamente estacional. Durante la estación favorable, únicamente se producen hembras partenogenéticas vivíparas (virginóparas). En otoño, cuando hay menos luz (el fotoperiodo es más corto), A. pisum percibe la diferencia y las virginóparas paren machos y luego hembras sexuadas (ovíparas). Tras aparearse, las ovíparas ponen huevos que resisten el invierno y eclosionan en primavera, reiniciando el ciclo. Algunos mutantes que ocurren de forma natural no responden al fotoperiodo y se reproducen asexualmente durante todo el año. Se denominan anholocíclicos en contraposición a los holocíclicos, que tienen fase sexual. Se desconocen los mecanismos molecu…

photoreceptionaphidphotoperiodismopsinsUNESCO::CIENCIAS DE LA VIDAcryptochrometranscriptome:CIENCIAS DE LA VIDA [UNESCO]
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Early evolutionary colocalization of the nuclear ribosomal 5S and 45S gene families in seed plants: evidence from the living fossil gymnosperm Ginkgo…

2012

In seed plants, the colocalization of the 5S loci within the intergenic spacer (IGS) of the nuclear 45S tandem units is restricted to the phylogenetically derived Asteraceae family. However, fluorescent in situ hybridization (FISH) colocalization of both multigene families has also been observed in other unrelated seed plant lineages. Previous work has identified colocalization of 45S and 5S loci in Ginkgo biloba using FISH, but these observations have not been confirmed recently by sequencing a 1.8 kb IGS. In this work, we report the presence of the 45S–5S linkage in G. biloba, suggesting that in seed plants the molecular events leading to the restructuring of the ribosomal loci are much o…

phylogenetic relictDNA PlantPseudogeneMolecular Sequence Dataintergenic spacerrDNAEvolution MolecularGymnospermTranscription (biology)GeneticsGene family45S–5S unitGeneGenetics (clinical)In Situ Hybridization FluorescenceGeneticsCell NucleusbiologyFossilsGinkgoRNA Ribosomal 5SColocalizationChromosome MappingGinkgo bilobaGenes rRNARibosomal RNAbiology.organism_classificationribosomal pseudogenes gymnospermSeedsOriginal Article
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Characterization and transcription studies of a phytochelatin synthase gene from the solitary tunicate Ciona intestinalis exposed to cadmium.

2014

The major thiol-containing molecules involved in controlling the level of intracellular ROS in eukaryotes, acting as a nonenzymatic detoxification system, are metallothioneins (MTs), glutathione (GSH) and phytochelatins (PCs). Both MTs and GSH are well-known in the animal kingdom. PC was considered a prerogative of the plant kingdom but, in 2001, a phytochelatin synthase (PCS) gene was described in the nematode Caenorhabditis elegans; additional genes encoding this enzyme were later described in the earthworm Eisenia fetida and in the parasitic nematode Schistosoma mansoni but scanty data are available, up to now, for Deuterostomes. Here, we describe the molecular characteristics and transc…

phytochelatin synthase; Ciona intestinalis; ascidians; cadmium; cell proliferationcadmiumHealth Toxicology and MutagenesisMolecular Sequence DataAquatic ScienceGene Expression Regulation Enzymologicphytochelatin synthaseTranscription (biology)BotanyGene OrderMetallothioneinAnimalsProliferation MarkerCiona intestinalisAmino Acid SequenceGenePhylogenybiologyCell growthGene Expression Profilingbiology.organism_classificationAminoacyltransferasesCell biologyCiona intestinalisascidiansGene expression profilingCionacell proliferationSequence AlignmentWater Pollutants ChemicalCadmiumAquatic toxicology (Amsterdam, Netherlands)
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Cold Exposure Affects Lipid Metabolism, Fatty Acids Composition and Transcription in Pig Skeletal Muscle

2021

Cold exposure promotes glucose oxidation and modulates the lipid metabolism in adipose tissue, but it is still not fully clear whether cold exposure could affect meat quality and fatty acid metabolism in skeletal muscle of pig in vivo. Here, we kept finishing pigs under cold or room temperature overnight and determined the effects of cold exposure on meat quality, fatty acids composition and transcriptional changes in skeletal muscle of pigs. We found that cold exposure significantly reduced the meat colour24 h and pH24 h, without affecting carcass characteristics and other meat quality traits. Considerable changes were found in the proportions of individual fatty acids and the total conten…

pigchemistry.chemical_classificationFatty acid metabolismPhysiologycold exposureAdipose tissueFatty acidSkeletal muscleLipid metabolismLipoprotein particlemeat qualitychemistry.chemical_compoundmedicine.anatomical_structureBiochemistrychemistryPhysiology (medical)Saturated fatty acidmedicineQP1-981fatty acidskeletal muscletranscriptomeOriginal ResearchPolyunsaturated fatty acidFrontiers in Physiology
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Regulatory networks underlying mycorrhizal development delineated by genome-wide expression profiling and functional analysis of the transcription fa…

2017

Background: Ectomycorrhizal (ECM) fungi develop a mutualistic symbiotic interaction with the roots of their host plants. During this process, they undergo a series of developmental transitions from the running hyphae in the rhizosphere to the coenocytic hyphae forming finger-like structures within the root apoplastic space. These transitions, which involve profound, symbiosis-associated metabolic changes, also entail a substantial transcriptome reprogramming with coordinated waves of differentially expressed genes. To date, little is known about the key transcriptional regulators driving these changes, and the aim of the present study was to delineate and functionally characterize the trans…

polypeptidelcsh:QH426-470Transcription factors; symbiosis; secreted proteins; transcriptional activator trap assay; yeast; transcriptome; ectomycorrhiza developmentlcsh:BiotechnologyTranscription Factors/geneticslaccaria bicolorpopulusyeastectomycorrhizasecreted proteinsLaccariadéveloppement biologiquelcsh:TP248.13-248.65MycorrhizaeTranscription factorsgenomicsGene Regulatory Networkstranscriptional activator trap assayLaccaria/geneticsectomycorrhiza developmentGene Expression ProfilingMycorrhizae/geneticsfungiMicrobiology and Parasitologypseudotsuga menziesiisymbiosisMicrobiologie et Parasitologielcsh:Genetics[SDV.MP]Life Sciences [q-bio]/Microbiology and ParasitologyontogenyectomycorhizeTranscription factors;ectomycorrhiza development;secreted proteins;symbiosis;transcriptional activator trap assay;transcriptome;yeastsymbiosetranscriptomefacteur de transcriptionResearch Article
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Motherhood‐induced gene expression in the mouse medial amygdala: Changes induced by pregnancy and lactation but not by pup stimuli

2021

During lactation, adult female mice display aggressive responses toward male intrud-ers, triggered by male- derived chemosensory signals. This aggressive behavior is not shown by pup- sensitized virgin females sharing pup care with dams. The genetic mechanisms underlying the switch from attraction to aggression are unknown. In this work, we investigate the differential gene expression in lactating females ex-pressing maternal aggression compared to pup- sensitized virgin females in the me-dial amygdala (Me), a key neural structure integrating chemosensory and hormonal information. The results showed 197 genes upregulated in dams, including genes encoding hormones such as prolactin, growth h…

prolactinmedicine.medical_specialtyGene ExpressionNeuropeptideBiologyReceptors OdorantBiochemistryMiceVomeronasal receptorPregnancyvomeronasal amygdalaInternal medicineLactationGene expressionGeneticsmedicineAnimalsLactationGalaninMaternal BehaviorRNA- SeqMolecular Biologyreproductive and urinary physiologyaggressionAmygdalaHormonesProlactinEndocrinologymedicine.anatomical_structureAnimals NewbornOxytocinModels AnimalFemaleVomeronasal OrgantranscriptomeBiotechnologymedicine.drugHormoneThe FASEB Journal
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Rac1 and PAK1 are upstream of IKK-ε and TBK-1 in the viral activation of interferon regulatory factor-3

2004

The anti-viral type I interferon (IFN) response is initiated by the immediate induction of IFN beta, which is mainly controlled by the IFN-regulatory factor-3 (IRF-3). The signaling pathways mediating viral IRF-3 activation are only poorly defined. We show that the Rho GTPase Rac1 is activated upon virus infection and controls IRF-3 phosphorylation and activity. Inhibition of Rac1 leads to reduced IFN beta promoter activity and to enhanced virus production. As a downstream mediator of Rac signaling towards IRF-3, we have identified the kinase p21-activated kinase (PAK1). Furthermore, both Rac1 and PAK1 regulate the recently described IRF-3 activators, I kappa B kinase- and TANK-binding kina…

rac1 GTP-Binding ProteinTranscription GeneticBiophysicsIκB kinaseProtein Serine-Threonine KinasesSignal transductionBiologyVirus ReplicationBiochemistryCell LineDogsPAK1Structural BiologyInterferonGeneticsmedicineAnimalsHumansPhosphorylationPromoter Regions Geneticp21-activated kinasesMolecular BiologyRNA Double-StrandedKinaseRho GTPaseI-Kappa-B KinaseNuclear ProteinsInterferon-betaCell BiologyCREB-Binding ProteinI-kappa B KinaseDNA-Binding ProteinsEnzyme Activationp21-Activated KinasesInfluenza A virusViral infectionAnti-viral responseTrans-ActivatorsCancer researchInterferon Regulatory Factor-3Transcription factorSignal transductionDimerizationTranscription FactorsInterferon regulatory factorsmedicine.drugFEBS Letters
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Deep sequencing of the human retinae reveals the expression of odorant receptors

2017

Several studies have demonstrated that the expression of odorant receptors (ORs) occurs in various tissues. These findings have served as a basis for functional studies that demonstrate the potential of ORs as drug targets for a clinical application. To the best of our knowledge, this report describes the first evaluation of the mRNA expression of ORs and the localization of OR proteins in the human retina that set a stage for subsequent functional analyses. RNA-Sequencing datasets of three individual neural retinae were generated using Next-generation sequencing and were compared to previously published but reanalyzed datasets of the peripheral and the macular human retina and to reference…

retinagenetic structuresddc:570odorant receptorsnext-generation sequencingsense organstranscriptomeeye diseasesNeuroscienceOriginal Researchimmunohistochemistry (IHC)
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Lovastatin inhibits Rho-regulated expression of E-selectin by TNFalpha and attenuates tumor cell adhesion.

2003

E-selectin mediated cell-cell adhesion plays an important role in inflammatory processes and extravasation of tumor cells. Tumor necrosis factor-alpha (TNF-alpha) induces E-selectin gene and protein expression in primary human endothelial cells (HUVEC) and in an endothelial cell line (EA.hy-926). As shown by ELISA and FACS analyses, HMG-CoA reductase inhibitors (e.g., lovastatin) impair the TNF-alpha stimulated increase in E-selectin protein expression. Similar results were obtained for E-selectin mRNA expression and promoter activity, indicating that the effect of lovastatin is based on inhibition of gene expression. The effective inhibitory concentration of lovastatin was in a physiologic…

rho GTP-Binding ProteinsRHOATranscription GeneticRHOBAntineoplastic AgentsBiochemistryCell MovementCell Line TumorNeoplasmsGene expressionE-selectinGeneticsmedicineCell AdhesionHumansLovastatinCell adhesionMolecular BiologyCells CulturedbiologyTumor Necrosis Factor-alphaCell biologybiology.proteinCancer researchTumor necrosis factor alphaLovastatinEndothelium VascularSignal transductionE-SelectinBiotechnologymedicine.drugSignal TransductionFASEB journal : official publication of the Federation of American Societies for Experimental Biology
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