Search results for "Transferases"

showing 10 items of 426 documents

Probing suggested catalytic domains of glycosyltransferases by site-directed mutagenesis.

2003

The plant enzyme arbutin synthase isolated from cell suspension cultures of Rauvolfia serpentina and heterologously expressed in Escherichia coli is a member of the NRD1beta family of glycosyltransferases. This enzyme was used to prove, by site-directed mutagenesis, suggested catalytic domains and reaction mechanisms proposed for enzyme-catalyzed glycosylation. Replacement of amino acids far from the NRD domain do not significantly affect arbutin synthase activity. Exchange of amino acids at the NRD site leads to a decrease of enzymatic activity, e.g. substitution of Glu368 by Asp. Glu368, which is a conserved amino acid in glycosyltransferases located at position 2 and is important for enz…

GlycosylationStereochemistryMolecular Sequence DataBiologyBiochemistryPolymerase Chain ReactionGene Expression Regulation EnzymologicRauwolfiaSubstrate Specificitychemistry.chemical_compoundCatalytic DomainGlycosyltransferaseEscherichia coliAmino Acid SequenceSite-directed mutagenesisConserved SequenceDNA Primerschemistry.chemical_classificationBinding SitesATP synthaseSequence Homology Amino AcidMutagenesisArbutinGlycosyltransferasesEnzyme assayRecombinant ProteinsAmino acidEnzymechemistryBiochemistryAmino Acid Substitutionbiology.proteinMutagenesis Site-DirectedEuropean journal of biochemistry
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Development of a green fluorescent tagged strain of Aspergillus carbonarius to monitor fungal colonization in grapes.

2011

An enhanced green fluorescent protein has been used to tag an OTA-producing strain of Aspergillus carbonarius (W04-40) isolated from naturally infected grape berries. Transformation of the fungus was mediated by Agrobacterium tumefaciens. The most efficient transformation occurred when the co-cultivation was done with 104 conidia due to higher frequency of resistance colonies (894 per 104 conidia) and lower background obtained. To confirm the presence of the hph gene in hygromycin resistant colonies, 20 putative transformants were screened by PCR analysis. The hph gene was identified in all the transformants. Variation on the expression levels of the eGFP was detected among the transformant…

GrapesOchratoxin productionHyphaGreen Fluorescent ProteinsHyphaeWineFood ContaminationAspergillus carbonariusMicrobiologyGreen fluorescent proteinMicrobiologyConidiumTransformation GeneticATMTGreen fluorescent proteinVitisDNA FungalAspergillusMicroscopy ConfocalbiologyStrain (chemistry)fungiFungal geneticsGene Transfer TechniquesGeneral MedicineAgrobacterium tumefaciensSpores Fungalbiology.organism_classificationOchratoxinsConfocal microscopyTransformation (genetics)Phosphotransferases (Alcohol Group Acceptor)AspergillusAgrobacterium tumefaciensCinnamatesConsumer Product SafetyFruitHygromycin BFood SciencePlasmidsInternational journal of food microbiology
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Interplay among Gcn5, Sch9 and mitochondria during chronological aging of wine yeast is dependent on growth conditions.

2015

Saccharomyces cerevisiae chronological life span (CLS) is determined by a wide variety of environmental and genetic factors. Nutrient limitation without malnutrition, i.e. dietary restriction, expands CLS through the control of nutrient signaling pathways, of which TOR/Sch9 has proven to be the most relevant, particularly under nitrogen deprivation. The use of prototrophic wine yeast allows a better understanding of the role of nitrogen in longevity in natural and more demanding environments, such as grape juice fermentation. We previously showed that acetyltransferase Gcn5, a member of the SAGA complex, has opposite effects on CLS under laboratory and winemaking conditions, and is detrimen…

GrapesSaccharomyces cerevisiae ProteinsNitrogenmedia_common.quotation_subjectSaccharomyces cerevisiaeLongevitylcsh:MedicineWineSaccharomyces cerevisiaeMitochondrionYeastsEndopeptidasesAutophagylcsh:ScienceWinemakingmedia_commonHistone AcetyltransferasesCell NucleusMultidisciplinarybiologyEthanollcsh:RLongevityIntracellular Signaling Peptides and ProteinsNutrientsbiology.organism_classificationYeastMitochondriaSAGA complexYeast in winemakingAutophagic cell deathPhenotypeBiochemistryFermentationFermentationlcsh:QProtein KinasesSignal TransductionTranscription FactorsResearch ArticlePLoS ONE
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Oxidative DNA base damage induced by singlet oxygen and photosensitization: recognition by repair endonucleases and mutagenicity.

2000

We have analyzed the recognition by various repair endonucleases of DNA base modifications induced by three oxidants, viz. [4-(tert-butyldioxycarbonyl)benzyl]triethylammonium chloride (BCBT), a photochemical source of tert-butoxyl radicals, disodium salt of 1,4-etheno-2,3-benzodioxin-1,4-dipropanoic acid (NDPO(2)), a chemical source of singlet oxygen, and riboflavin, a type-I photosensitizer. The base modifications induced by BCBT, which were previously shown to be mostly 7,8-dihydro-8-oxoguanine (8-oxoGua) residues, were recognized by Fpg and Ogg1 proteins, but not by endonuclease IIII, Ntg1 and Ntg2 proteins. In the case of singlet oxygen induced damage, 8-oxoGua accounted for only 35% of…

GuanineDNA LigasesLightGuanineDNA damageRiboflavinMolecular Sequence DataToxicologySubstrate Specificitychemistry.chemical_compoundEndonucleaseBacterial ProteinsGeneticsPhotosensitizerPentosyltransferasesMolecular BiologybiologyBase SequenceSinglet oxygenEscherichia coli ProteinsMutagenesisCorticoviridaeProteinsEndonucleasesDNA-(apurinic or apyrimidinic site) lyaseOxygenBiochemistrychemistryDNA ViralMutationbiology.proteinOxidation-ReductionDNADNA DamageMutation research
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tert-Butoxyl radicals generate mainly 7,8-dihydro-8-oxoguanine in DNA.

2000

Abstract Like hydroxyl radicals, alkoxyl radicals have been implicated in the generation of cellular oxidative DNA damage under physiological conditions; however, their genotoxic potential has not yet been established. We have analyzed the DNA damage induced by a photochemical source of tert- butoxyl radicals, the water soluble peroxy ester [4-( tert -butyldioxycarbonyl)benzyl]triethylammonium chloride (BCBT), using various repair endonucleases as probes. The irradiation (UV 360 ) of BCBT in the presence of bacteriophage PM2 DNA was found to generate a DNA damage profile that consisted mostly of base modifications sensitive to the repair endonuclease Fpg protein. Approximately 90% of the mo…

GuaninePyrimidineDNA damageStereochemistryUltraviolet RaysRadicalMolecular Sequence DataBiologyToxicologymedicine.disease_causechemistry.chemical_compoundBacterial ProteinsGeneticsmedicinePentosyltransferasesMolecular BiologyBase SequencePoint mutationEscherichia coli ProteinsMutagenesisCorticoviridaeProteins8-OxoguanineQuaternary Ammonium CompoundsBiochemistrychemistryMutagenesisAlcoholsDNA ViralOxidative stressDNADNA DamagePlasmidsMutation research
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Drug-metabolizing enzyme activities in freshly isolated oval cells and in an established oval cell line from carcinogen-fed rats

1994

The activities of several different phase I and phase II drug-metabolizing enzymes were measured in freshly isolated oval cells from rats fed a choline-deficient/DL-ethionine-supplemented diet for 6 weeks and also in vitro in the established oval cell line OC/CDE 6. No cytochrome P450 was spectrophotometrically measurable in both preparations and two cytochrome P450-dependent monoxygenase activities, aminopyrine N-demethylase and ethoxyresorufin O-deethylase, could not be detected in the oval cells of both sources. However, cytosolic glutathione transferase, microsomal epoxide hydrolase and UDP-glucuronosyltransferase activities were clearly measurable in oval cells. Similar enzyme activiti…

Health Toxicology and MutagenesisBiologyToxicologyCytochrome P-450 Enzyme SystemAnimalsCytotoxic T cellRNA MessengerGlucuronosyltransferaseCells CulturedGlutathione TransferaseEpoxide HydrolasesConfluencyCytochrome P450Cell BiologyRats Inbred F344In vitroDietRatsLiverBiochemistryCell cultureSulfurtransferasesMicrosomal epoxide hydrolaseCarcinogensbiology.proteinMicrosomeDrug metabolismCell Biology and Toxicology
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CREBBP/EP300 acetyltransferase inhibition disrupts FOXA1-bound enhancers to inhibit the proliferation of ER+ breast cancer cells.

2021

ABSTRACTTherapeutic targeting of the estrogen receptor (ER) is a clinically validated approach for estrogen receptor positive breast cancer (ER+ BC), but sustained response is limited by acquired resistance. Targeting the transcriptional coactivators required for estrogen receptor activity represents an alternative approach that is not subject to the same limitations as targeting estrogen receptor itself. In this report we demonstrate that the acetyltransferase activity of coactivator paralogs CREBBP/EP300 represents a promising therapeutic target in ER+ BC. Using the potent and selective inhibitor CPI-1612, we show that CREBBP/EP300 acetyltransferase inhibition potently suppresses in vitro…

Hepatocyte Nuclear Factor 3-alphaMultidisciplinaryReceptors EstrogenAcetyltransferasesCell Line TumorMCF-7 CellsHumansBreast NeoplasmsFemaleCREB-Binding ProteinE1A-Associated p300 ProteinCell ProliferationPloS one
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5-methylcytosine modification of an Epstein–Barr virus noncoding RNA decreases its stability

2020

Many cellular noncoding RNAs contain chemically modified nucleotides that are essential for their function. The Epstein–Barr virus expresses two highly abundant noncoding RNAs called EBV-encoded RNA 1 (EBER1) and EBER2. To examine whether these viral RNAs contain modified nucleotides, we purified native EBERs from EBV-infected cells and performed mass spectrometry analysis. While EBER2 contains no modified nucleotides at stoichiometric amounts, EBER1 was found to carry 5-methylcytosine (m5C) modification. Bisulfite sequencing indicated that a single cytosine of EBER1 is methylated in ∼95% of molecules, and the RNA methyltransferase NSUN2 was identified as the EBER1-specific writer. Intrigui…

Herpesvirus 4 HumanRNA StabilityRNA UntranslatedRNase PRNA StabilityBisulfite sequencingBiologyArticle03 medical and health scienceschemistry.chemical_compoundhemic and lymphatic diseasesHumansNucleotideMolecular Biology030304 developmental biologychemistry.chemical_classification0303 health sciences030302 biochemistry & molecular biologyvirus diseasesRNAMethyltransferasesNon-coding RNA5-MethylcytosineBiochemistrychemistry5-MethylcytosineRNA ViralCytosineRNA
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Type-II histone deacetylases: elusive plant nuclear signal transducers

2013

Since the beginning of the 21st century, numerous studies have concluded that the plant cell nucleus is one of the cellular compartments that define the specificity of the cellular response to an external stimulus or to a specific developmental stage. To that purpose, the nucleus contains all the enzymatic machinery required to carry out a wide variety of nuclear protein post-translational modifications (PTMs), which play an important role in signal transduction pathways leading to the modulation of specific sets of genes. PTMs include protein (de)acetylation which is controlled by the antagonistic activities of histone acetyltransferases (HATs) and histone deacetylases (HDACs). Regarding p…

Histone AcetyltransferasesGeneticsPhysiologyPlant ScienceBiologyCell biologyHistoneAcetylationbiology.proteinNuclear proteinSignal transductionGeneCellular compartmentProtein deacetylationPlant, Cell & Environment
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Redox signaling and histone acetylation in acute pancreatitis

2011

Histone acetylation via CBP/p300 coordinates the expression of proinflammatory cytokines in the activation phase of inflammation, particularly through mitogen-activated protein kinases (MAPKs), nuclear factor-κB (NF-κB), and signal transducers and activators of transcription (STAT) pathways. In contrast, histone deacetylases (HDACs) and protein phosphatases are mainly involved in the attenuation phase of inflammation. The role of reactive oxygen species (ROS) in the inflammatory cascade is much more important than expected. Mitochondrial ROS act as signal-transducing molecules that trigger proinflammatory cytokine production via inflammasome-independent and inflammasome-dependent pathways. …

Histone AcetyltransferasesMitochondrial ROSAcetylationProtein tyrosine phosphataseBiologyEndoplasmic Reticulum StressBiochemistryChromatin remodelingProinflammatory cytokineHistonesOxidative StressHistoneGene Expression RegulationPancreatitisAcetylationPhysiology (medical)Acute Diseasebiology.proteinCancer researchAnimalsHumansPhosphorylationOxidation-ReductionProtein Processing Post-TranslationalSignal TransductionFree Radical Biology and Medicine
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