Search results for "UNESCO::FÍSICA::Química Física"

showing 10 items of 81 documents

Ab initio determination of the ionization potentials of DNA and RNA nucleobases

2006

Quantum chemical high level ab initio coupled-cluster and multiconfigurational perturbation methods have been used to compute vertical and adiabatic ionization potentials of the five canonical DNA and RNA nucleobases: uracil, thymine, cytosine, adenine, and guanine. Several states of their cations have been also calculated. The present results represent a systematic compendium of these magnitudes, establishing theoretical reference values at a level not reported before, calibrating computational strategies, and guiding the assignment of the features in the experimental photoelectron spectra. Daniel.Roca@uv.es Mercedes.Rubio@uv.es Manuela.Merchan@uv.es Luis.Serrano@uv.es

DNA ; Macromolecules ; Ionisation potential ; Photoelectron spectra ; Molecular biophysics ; Ab initio calculations ; Coupled cluster calculations ; Perturbation theoryGuanineGuaninePhotochemistryAb initioBiophysicsGeneral Physics and AstronomyIonisation potentialPerturbation theoryNucleobasechemistry.chemical_compoundCytosinePhotoelectron spectraCoupled cluster calculationsAb initio quantum chemistry methodsComputational chemistryIonizationPhysics::Atomic and Molecular ClustersPhysical and Theoretical ChemistryUracil:FÍSICA::Química física [UNESCO]IonsPhysics::Biological PhysicsQuantitative Biology::BiomoleculesBase CompositionChemistry PhysicalAdenineUracilDNAMolecular biophysicsQuantitative Biology::GenomicsThymineUNESCO::FÍSICA::Química físicachemistryMacromoleculesCalibrationQuantum TheoryRNAAb initio calculationsCytosineSoftwareThymine
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Fast noniterative orbital localization for large molecules

2006

We use Cholesky decomposition of the density matrix in atomic orbital basis to define a new set of occupied molecular orbital coefficients. Analysis of the resulting orbitals ("Cholesky molecular orbitals") demonstrates their localized character inherited from the sparsity of the density matrix. Comparison with the results of traditional iterative localization schemes shows minor differences with respect to a number of suitable measures of locality, particularly the scaling with system size of orbital pair domains used in local correlation methods. The Cholesky procedure for generating orthonormal localized orbitals is noniterative and may be made linear scaling. Although our present implem…

Density matrixPhysicsBasis (linear algebra)Minor (linear algebra)General Physics and AstronomySTO-nG basis setsOrbital calculationsUNESCO::FÍSICA::Química físicaHF calculations ; Orbital calculationsPhysics and Astronomy (all)Atomic orbitalComputational chemistryMolecular orbitalOrthonormal basisStatistical physicsPhysical and Theoretical Chemistry:FÍSICA::Química física [UNESCO]HF calculationsCholesky decompositionThe Journal of Chemical Physics
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Selected dissociation‐ and correlation‐consistent configuration interaction by a perturbative criterion

1990

We propose a perturbative criterion to select the most important dissociation‐ or correlation‐consistent type of contributions to perform generalized valence bond‐configuration interaction (GVB‐CI) calculations, dissociation‐consistent configuration interaction (DCCI) or correlation‐consistent configuration interaction (CCCI) approach, respectively. The procedure presented is computationally less demanding than the CCCI proposed by Goddard and co‐workers. To ensure the distance consistency of the MOs used, the nonvalence virtual orbitals are obtained by a projection technique. The results obtained for a few test calculations show the ability of the suggested approach to get close results to…

Diatomic MoleculesValence (chemistry)ChemistryConfiguration Interaction ; Electronic Structure ; Dissociation Energy ; Perturbation Theory ; Diatomic Molecules ; Polyatomic MoleculesGeneral Physics and AstronomyDissociation EnergyElectronic structureConfiguration interactionBond-dissociation energyDiatomic moleculeDissociation (chemistry)Polyatomic MoleculesUNESCO::FÍSICA::Química físicaConfiguration InteractionElectronic StructureAtomic orbitalComputational chemistryPerturbation TheoryPerturbation theory (quantum mechanics)Statistical physicsPhysical and Theoretical Chemistry:FÍSICA::Química física [UNESCO]The Journal of Chemical Physics
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Magic numbers, excitation levels, and other properties of small neutral math clusters (N < 50)

2006

The ground-state energies and the radial and pair distribution functions of neutral math clusters are systematically calculated by the diffusion Monte Carlo method in steps of one math atom from 3 to 50 atoms. In addition the chemical potential and the low-lying excitation levels of each cluster are determined with high precision. These calculations reveal that the “magic numbers” observed in experimental math cluster size distributions, measured for free jet gas expansions by nondestructive matter-wave diffraction, are not caused by enhanced stabilities. Instead they are explained in terms of an enhanced growth due to sharp peaks in the equilibrium concentrations in the early part of the e…

DiffusionHelium neutral atoms ; Atomic clusters ; Ground states ; Excited states ; Chemical potential ; Diffusion ; Monte Carlo methods ; Molecular configurationsHelium neutral atomsAtomic clustersExcited statesMonte Carlo methods:FÍSICA::Química física [UNESCO]Chemical potentialMolecular configurationsGround statesUNESCO::FÍSICA::Química física
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Calculation of size‐intensive transition moments from the coupled cluster singles and doubles linear response function

1994

Coupled cluster singles and doubles linear response (CCLR) calculations have been carried out for excitation energies and dipole transition strengths for the lowest excitations in LiH, CH+, and C4and the results compared with the results from a CI-like approach to equation of motion coupled cluster (EOMCC). The transition strengths are similar in the two approaches for single molecule calculations on small systems. However, the CCLR approach gives size-intensive dipole transition strengths, while title EOMCC formalism does not. Thus, EOMCC calculations can give unphysically dipole transition strengths, e.g., in EOMCC calculations on a sequence of noninteracting LiH systems we obtained a neg…

DipolesGeneral Physics and AstronomySmall systemsExcitation ; Dipoles ; Lithium Hydrides ; Carbynes ; Cations ; Molecular Ions ; Carbon Molecules ; Equations Of Motion ; Correlations ; Response FunctionsPhysics and Astronomy (all)CationsMoleculePhysical and Theoretical Chemistry:FÍSICA::Química física [UNESCO]ExcitationCorrelationsChemistryEquations of motionCarbon MoleculesLinear response functionUNESCO::FÍSICA::Química físicaFormalism (philosophy of mathematics)DipoleCoupled clusterLithium HydridesCarbynesResponse FunctionsAtomic physicsEquations Of MotionMolecular IonsExcitationThe Journal of Chemical Physics
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Linear and nonlinear optical properties of a series of Ni-dithiolene derivatives

2009

Some linear and nonlinear optical (NLO) properties of Ni(SCH)4 and several of its derivatives have been computed by employing a series of basis sets and a hierarchy of methods (e.g., HF, DFT, coupled cluster, and multiconfigurational techniques). The electronic structure of Ni(SCH)4 has been also analyzed by using CASSCF/CASPT2, ab initio valence bond, and DFT methods. In particular we discuss how the diradicaloid character (DC) of Ni(SCH)4 significantly affects its NLO properties. The quasidegeneracy of the two lowest-energy singlet states 1 mathg and 1 math1u, the clear DC nature of the former, and the very large number of low-lying states enhance the NLO properties values. These particul…

Electronic structureNonlinear opticsSeries (mathematics)Optical propertiesChemistryAb initioGeneral Physics and AstronomyNonlinear opticsElectronic structureAb initio calculations ; Electronic structure ; Nonlinear optics ; Optical materials ; Optical properties ; Organic compounds ; VB calculationsUNESCO::FÍSICA::Química físicaCoupled clusterVB calculationsAb initio quantum chemistry methodsComputational chemistryOptical materialsOrganic compoundsPhysical chemistryValence bond theorySinglet stateAb initio calculationsPhysical and Theoretical Chemistry:FÍSICA::Química física [UNESCO]
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Equilibrium swelling properties of polyampholytic hydrogels

1996

The role of counter ions and ion dissociation in establishing the equilibrium swelling of balanced and unbalanced polyampholytic hydrogels has been investigated experimentally and theoretically. The swelling dependence on both the net charge offset and the external bath salt concentration has been examined using an acrylamide based polyampholytic hydrogels. By careful consideration of the swelling kinetics, we illustrate the effects of ion dissociation equilibria and counter ion shielding in polyampholytic hydrogels near their balance point where both polyelectrolyte and polyampholyte effects are present. The theory considers a Flory type swelling model where the Coulombic interactions betw…

EquilibriumGeneral Physics and AstronomyIonic bondingThermodynamicsGels ; Swelling ; Polymer Networks ; Coulomb Field ; Ionic Composition ; Screening ; Charge Density ; EquilibriumIonsymbols.namesakemedicinePhysics::Chemical PhysicsPhysical and Theoretical ChemistrySwelling:FÍSICA::Química física [UNESCO]Debyechemistry.chemical_classificationQuantitative Biology::BiomoleculesChemistryIonic CompositionCharge densityPolyelectrolyteUNESCO::FÍSICA::Química físicaCondensed Matter::Soft Condensed MatterPolymer NetworksCharge DensityCoulomb FieldSelf-healing hydrogelssymbolsScreeningSwellingmedicine.symptomCounterionGels
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Towards an accurate molecular orbital theory for excited states : Ethene, butadiene, and hexatriene

1993

A newly proposed quantum chemical approach for ab initio calculations of electronic spectra of molecular systems is applied to the molecules ethene, trans‐1,3‐butadiene, and trans‐trans‐1,3,5‐hexatriene. The method has the aim of being accurate to better than 0.5 eV for excitation energies and is expected to provide structural and physical data for the excited states with good reliability. The approach is based on the complete active space (CAS) SCF method, which gives a proper description of the major features in the electronic structure of the excited state, independent of its complexity, accounts for all near degeneracy effects, and includes full orbital relaxation. Remaining dynamic ele…

ErrorsGeneral Physics and AstronomyPolyenesElectronic structuresymbols.namesakeRydberg StatesAb initio quantum chemistry methodsComputational chemistrySinglet statePhysical and Theoretical ChemistryTriplet state:FÍSICA::Química física [UNESCO]AccuracyExcitationCalculation MethodsButadieneTripletsChemistryMolecular orbital theoryScf CalculationsExcited StatesCalculation Methods ; Quantum Chemistry ; Ab Initio Calculations ; Electron Spectra ; Butadiene ; Accuracy ; Scf Calculations ; Triplets ; Rydberg States ; Excitation ; Errors ; Polyenes ; Excited StatesQuantum ChemistryUNESCO::FÍSICA::Química físicaElectron SpectraExcited stateRydberg formulasymbolsRydberg stateAtomic physicsAb Initio Calculations
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Donnan phenomena in membranes with charge due to ion adsorption. Effects of the interaction between adsorbed charged groups

1993

A physical model for the modified Donnan phenomenon associated with ion adsorption on localized membrane sites is presented. This model accounts for the dependence of the concentration of adsorbed ions on electrolyte concentration and pH as it is influenced by the electrostatic interaction between adsorbed ions. The equilibrium thermodynamic concepts employed are based on the Donnan formalism for the ion equilibria between membrane and solution, and the Bragg–Williams approximation for an adsorption isotherm that incorported interaction between adsorbed ions. Our results include the concentration of charged groups in the membrane, the pH of the membrane phase solution, and the Donnan potent…

General Physics and AstronomyElectrolyteElectric chargeIonQuantitative Biology::Subcellular ProcessesCouplingsymbols.namesakeAdsorptionPhysics::Plasma PhysicsPhase (matter)Donnan Theory ; Membranes ; Electric Charges ; Ions ; Adsorption ; Coupling ; Mathematical ModelsPhysics::Chemical PhysicsPhysical and Theoretical Chemistry:FÍSICA::Química física [UNESCO]IonsConductive polymerDonnan potentialMembranesMathematical ModelsChemistrymusculoskeletal neural and ocular physiologyUNESCO::FÍSICA::Química físicaCondensed Matter::Soft Condensed MatterMembraneChemical physicssymbolsPhysical chemistryDonnan TheoryElectric ChargesAdsorptionThe Journal of Chemical Physics
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A CI study of the CuCO and CuCO+ complexes

1987

MO CI calculations are carried out using an optimal space of valence virtual MOs obtained by means of a projection technique, as a linear combination of the AOs which are more occupied in the molecular Fock space. Localization of the occupied MOs and nonvalence virtual MOs is also achieved. The overall procedure is proven to be quite advantageous and well suited to obtain potential energy curves which keep the same physical meaning along the range of distances studied. Using a slightly better than double‐zeta quality basis set, a valence CAS‐CI, and selected CI wave function by the CIPSI algorithm have revealed a possible weak van der Waals interaction for the 2Σ+ state of CuCO, which remai…

General Physics and AstronomyElectronic structureCopper CompoundsMolecular physicsCopper Complexessymbols.namesake:FÍSICA [UNESCO]CarbonylsPhysical and Theoretical Chemistry:FÍSICA::Química física [UNESCO]Basis setPi backbondingValence (chemistry)Electronic correlationChemistryUNESCO::FÍSICAConfiguration interactionPotential energyUNESCO::FÍSICA::Química físicaConfiguration InteractionValenceElectronic StructuresymbolsElectron CorrelationConfiguration Interaction ; Electron Correlation ; Copper Compounds ; Carbonyls ; Copper Complexes ; Electronic Structure ; Valencevan der Waals forceAtomic physicsThe Journal of Chemical Physics
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