Search results for "VARIABILITY"

Increasing temperature alters the within-host competition of viral strains and influences virus genetic variability

2021

Environmental conditions can affect viral accumulation, virulence and adaptation, which have implications in the disease outcomes and efficiency of control measures. Concurrently, mixed viral infections are relevant in plants, being their epidemiology shaped by within-host virus–virus interactions. However, the extent in which the combined effect of variations in abiotic components of the plant ecological niche and the prevalence of mixed infections affect the evolutionary dynamics of viral populations is not well understood. Here, we explore the interplay between ecological and evolutionary factors during viral infections and show that isolates of two strains of Pepino mosaic potexvirus co…

2019

Conflicts between biodiversity conservation and resource production can be mitigated by multi-objective management planning. Optimizing management for multiple objectives over larger land areas likely entails trading off the practicability of the process against the goodness of the solution. It is therefore worthwhile to resolve how large areas are required as management planning regions to reconcile conflicting objectives as effectively as possible. We aimed to reveal how the extent of forestry planning regions impacts the potential to mitigate a forestry-conservation conflict in Finland, represented as a trade-off between harvest income and deadwood availability. We used forecasted data f…

Agro-Morphological Characterization of Sicilian Chili Pepper Accessions for Ornamental Purposes

2020

The species belonging to the genus Capsicum have been widely used as decorative vegetables, however only a few genotypes are available for this purpose. The goal of the present work was the agro-morphological characterization of several chili pepper accessions cultivated into different pot sizes (10, 14, 18 or 20 cm diameters). The agro-morphological characterization of 19 accessions was performed following IPGR (International Plant Genetic Resources Institute) descriptors: plant height (PH), plant canopy width (PCW), PH/PCW ratio, plant growth habit, plant visual quality, first flower emission, fruiting start, end of harvest, fruit number, fruit length, fruit width, fruit color at mature s…

Predictions of avian Plasmodium expansion under climate change.

2013

International audience; Vector-borne diseases are particularly responsive to changing environmental conditions. Diurnal temperature variation has been identified as a particularly important factor for the development of malaria parasites within vectors. Here, we conducted a survey across France, screening populations of the house sparrow (Passer domesticus) for malaria (Plasmodium relictum). We investigated whether variation in remotely-sensed environmental variables accounted for the spatial variation observed in prevalence and parasitemia. While prevalence was highly correlated to diurnal temperature range and other measures of temperature variation, environmental conditions could not pre…

The effects of oil spills on marine fish: Implications of spatial variation in natural mortality.

2017

The effects of oil spills on marine biological systems are of great concern, especially in regions with high biological production of harvested resources such as in the Northeastern Atlantic. The scientific studies of the impact of oil spills on fish stocks tend to ignore that spatial patterns of natural mortality may influence the magnitude of the impact over time. Here, we first illustrate how spatial variation in natural mortality may affect the population impact by considering a thought experiment. Second, we consider an empirically based example of Northeast Arctic cod to extend the concept to a realistic setting. Finally, we present a scenario-based investigation of how the degree of …

Do peahens not prefer peacocks with more elaborate trains?

2008

Ever since Darwin (1871), the peacock’s train has been cited as the icon of an extravagant conspicuous secondary sexual trait that has evolved through female mate choice. However, Takahashi et al. (2008) recently challenged this idea. They monitored female mate choice during 7 years in a feral peafowl, Pavo cristatus, population in Japan and found no correlation between male mating success and three morphological train traits. They concluded that ‘combined with previous results, our findings indicate that the peacock’s train is not currently the universal target of female choice’ and proposed ‘that the peacock’s train is an obsolete signal for which female preference has already been lost o…

The gypsy database (GyDB) of mobile genetic elements: release 2.0

2011

This article introduces the second release of the Gypsy Database of Mobile Genetic Elements (GyDB 2.0): a research project devoted to the evolutionary dynamics of viruses and transposable elements based on their phylogenetic classification (per lineage and protein domain). The Gypsy Database (GyDB) is a long-term project that is continuously progressing, and that owing to the high molecular diversity of mobile elements requires to be completed in several stages. GyDB 2.0 has been powered with a wiki to allow other researchers participate in the project. The current database stage and scope are long terminal repeats (LTR) retroelements and relatives. GyDB 2.0 is an update based on the analys…

Stand out from the Crowd: Small-Scale Genetic Structuring in the Endemic Sicilian Pond Turtle

2020

The geographical pattern of genetic diversity was investigated in the endemic Sicilian pond turtle Emys trinacris across its entire distribution range, using 16 microsatellite loci. Overall, 245 specimens of E. trinacris were studied, showing high polymorphic microsatellite loci, with allele numbers ranging from 7 to 30. STRUCTURE and GENELAND analyses showed a noteworthy, geographically based structuring of the studied populations in five well-characterized clusters, supported by a moderate degree of genetic diversity (FST values between 0.075 and 0.160). Possible explanations for the genetic fragmentation observed are provided, where both natural and human-mediated habitat fragmentation o…

Temporal fluctuations in seawater pCO2 may be as important as mean differences when determining physiological sensitivity in natural systems

2015

AbstractMost studies assessing the impacts of ocean acidification (OA) on benthic marine invertebrates have used stable mean pH/pCO2 levels to highlight variation in the physiological sensitivities in a range of taxa. However, many marine environments experience natural fluctuations in carbonate chemistry, and to date little attempt has been made to understand the effect of naturally fluctuating seawater pCO2 (pCO2sw) on the physiological capacity of organisms to maintain acid–base homeostasis. Here, for the first time, we exposed two species of sea urchin with different acid–base tolerances, Paracentrotus lividus and Arbacia lixula, to naturally fluctuating pCO2sw conditions at shallow wat…

Blowing in the wind: how many roads can a phytoplanktont walk down? A synthesis on phytoplankton biogeography and spatial processes

2015

The selected theme of the 17th Workshop of the International Association for Phytoplankton Taxonomy and Ecology (IAP), ‘‘Biogeography and Spatial Patterns of Biodiversity of Freshwater Phytoplankton,’’ offered the opportunity to explore one neglected aspect of phytoplankton ecology: the distribution of species in the geographic space. This paper summarizes the outcomes of 20 selected contributions among those presented at the workshop. The articles report the results from studies carried out in five continents (only Oceania is not represented) and on a wide array of aquatic ecosystems (deep and shallow natural lakes, man-made lakes, temporary and permanent ponds, rivers). The topics analyze…