Search results for "Variable-selection"

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Two-Stage Bayesian Approach for GWAS With Known Genealogy

2019

Genome-wide association studies (GWAS) aim to assess relationships between single nucleotide polymorphisms (SNPs) and diseases. They are one of the most popular problems in genetics, and have some peculiarities given the large number of SNPs compared to the number of subjects in the study. Individuals might not be independent, especially in animal breeding studies or genetic diseases in isolated populations with highly inbred individuals. We propose a family-based GWAS model in a two-stage approach comprising a dimension reduction and a subsequent model selection. The first stage, in which the genetic relatedness between the subjects is taken into account, selects the promising SNPs. The se…

0301 basic medicineStatistics and ProbabilityBayesian probabilityPopulationSingle-nucleotide polymorphismGenome-wide association studyComputational biologyEstadísticaBiologyKinship coefficientModel selection01 natural sciencesBeta-thalassemia010104 statistics & probability03 medical and health sciencesBeta-thalassemia disorderModelsRobust prior distributionRegularizationDiscrete Mathematics and Combinatorics0101 mathematicsStage (cooking)Genetic associationGenome-wide associationModel selectionVariable-selectionProbability and statisticsBayes factorRegressionBayes factor030104 developmental biologyPhenotypeStatistics Probability and UncertaintyGaussian Markov random field
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