Search results for "WATER COLUMN"
showing 10 items of 123 documents
Novel Autotrophic Organisms Contribute Significantly to the Internal Carbon Cycling Potential of a Boreal Lake
2018
ABSTRACT Oxygen-stratified lakes are typical for the boreal zone and also a major source of greenhouse gas emissions in the region. Due to shallow light penetration, restricting the growth of phototrophic organisms, and large allochthonous organic carbon inputs from the catchment area, the lake metabolism is expected to be dominated by heterotrophic organisms. In this study, we test this assumption and show that the potential for autotrophic carbon fixation and internal carbon cycling is high throughout the water column. Further, we show that during the summer stratification carbon fixation can exceed respiration in a boreal lake even below the euphotic zone. Metagenome-assembled genomes an…
Gammaproteobacterial methanotrophs dominate methanotrophy in aerobic and anaerobic layers of boreal lake waters
2018
Small oxygen-stratified humic lakes of the boreal zone are important sources of methane to the atmosphere. Although stable isotope profiling has indicated that a substantial part of methane is already oxidized in the anaerobic water layers in these lakes, the contributions of aerobic and anaerobic methanotrophs in the process are unknown. We used next-generation sequencing of mcrA and 16S rRNA genes to characterize the microbial communities in the water columns of 2 boreal lakes in Finland, Lake Alinen-Mustajärvi and Lake Mekkojärvi, and complemented this with a shotgun metagenomic analysis from Alinen-Mustajärvi and an analysis of pmoA genes and 16S rRNA, mcrA, and pmoA transcripts from Me…
Methanotrophy under Versatile Conditions in the Water Column of the Ferruginous Meromictic Lake La Cruz (Spain)
2016
Lakes represent a considerable natural source of methane to the atmosphere compared to their small global surface area. Methanotrophs in sediments and in the water column largely control methane fluxes from these systems, yet the diversity, electron accepting capacity, and nutrient requirements of these microorganisms have only been partially identified. Here, we investigated the role of electron acceptors alternative to oxygen and sulfate in microbial methane oxidation at the oxycline and in anoxic waters of the ferruginous meromictic Lake La Cruz, Spain. Active methane turnover in a zone extending well below the oxycline was evidenced by stable carbon isotope-based rate measurements. We o…
Fine metagenomic profile of the Mediterranean stratified and mixed water columns revealed by assembly and recruitment
2018
Background: The photic zone of aquatic habitats is subjected to strong physicochemical gradients. To analyze the fine-scale variations in the marine microbiome, we collected seven samples from a single offshore location in the Mediterranean at 15 m depth intervals during a period of strong stratification, as well as two more samples during the winter when the photic water column was mixed. We were able to recover 94 new metagenome-assembled genomes (MAGs) from these metagenomes and examine the distribution of key marine microbes within the photic zone using metagenomic recruitment. Results: Our results showed significant differences in the microbial composition of different layers within th…
Deep-Sea Bioluminescence Blooms after Dense Water Formation at the Ocean Surface
2013
The deep ocean is the largest and least known ecosystem on Earth. It hosts numerous pelagic organisms, most of which are able to emit light. Here we present a unique data set consisting of a 2.5-year long record of light emission by deep-sea pelagic organisms, measured from December 2007 to June 2010 at the ANTARES underwater neutrino telescope in the deep NW Mediterranean Sea, jointly with synchronous hydrological records. This is the longest continuous time-series of deep-sea bioluminescence ever recorded. Our record reveals several weeks long, seasonal bioluminescence blooms with light intensity up to two orders of magnitude higher than background values, which correlate to changes in th…
Climate controls on the Holocene development of a subarctic lake in northern Fennoscandia
2015
International audience; Climate exerts strong control over the functioning of northern freshwater ecosystems, yet their resilience and responses to climate forcing may vary. We examined postglacial development patterns in subarctic Lake Varddoaijavri to discern the impact of direct climate controls, catchment influence, and ontogenic processes on the ecological functioning of the lake over the Holocene. Subfossil diatom assemblages together with the elemental and stable isotopic (delta C-13, delta N-15) composition of sediment organic matter were used to examine climate-induced changes in the structure of the phototrophic community and transport of terrestrial organic matter from the catchm…
Bioaccumulation of hepatotoxins : A considerable risk in the Latvian environment
2014
Abstract The Gulf of Riga, river Daugava and several interconnected lakes around the City of Riga, Latvia, form a dynamic brackish-freshwater system favouring occurrence of toxic cyanobacteria. We examined bioaccumulation of microcystins and nodularin-R in aquatic organisms in Latvian lakes, the Gulf of Riga and west coast of open Baltic Sea in 2002–2007. The freshwater unionids accumulated toxins efficiently, followed by snails. In contrast, Dreissena polymorpha and most lake fishes (except roach) accumulated much less hepatotoxins. Significant nodularin-R concentrations were detected also in marine clams and flounders. No transfer of nodularin-R and microcystins between lake and brackish …
Factors controlling plankton productivity, particulate matter stoichiometry, and export fluxin the coastal upwelling system off Peru
2020
Abstract. Eastern boundary upwelling systems (EBUS) are among the most productive marine ecosystems on Earth. The high productivity in surface waters is facilitated by upwelling of nutrient-rich deep waters, with high light availability enabling fast phytoplankton growth and nutrient utilization. However, there are numerous biotic and abiotic factors modifying productivity and biogeochemical processes. Determining these factors is important because EBUS are considered hotspots of climate change, and reliable predictions on their future functioning requires understanding of the mechanisms driving biogeochemical cycles therein. In this study, we used in situ mesocosms to obtain mechanistic un…
Interspecies interactions mediated by conductive minerals in the sediments of the ferruginous Lake La Cruz, Spain
2018
AbstractLake La Cruz is considered a biogeochemical analogue to early Earth marine environments because its water column is depleted in sulfate, but rich in methane and iron, similar to conditions envisaged for much of the Precambrian. In this early Earth analogue environment, we show that conductive particles establish a tight metabolic coupling between electroactive microbial clades. We propose that mineral-based syntrophy is of potential relevance for the evolution of Earth’s earliest complex life forms. We show that the anoxic sediment of Lake La Cruz, which is rich in biogeochemically ‘reactive’ iron minerals, harbors known electroactive species such asGeobacterandMethanothrix,in addit…
The rotifer community and its functional role in lakes of a neotropical floodplain
2014
Aquatic communities vary depending on local factors, such as environmental conditions and biological interactions and regional factors, such as the hydrological regime in floodplains. This study analyzed the community structure of rotifers and their secondary production in two lakes of an Upper Parana River floodplain (Brazil) differing in their hydrology: one connected to the river and the other isolated. Integrated samples of the water column were collected daily during 15 days in the low and high water periods. Three statistical methods, ANOVA, MRT, and IndVal were applied to distinguish the structure, biomass, and secondary production of their rotifer communities. The rotifer fauna was …