Search results for "YK"

showing 10 items of 5437 documents

Oxidative stress inhibits IFN-α-induced antiviral gene expression by blocking the JAK–STAT pathway

2006

Abstract BACKGROUND/AIMS: Unresponsiveness to IFN-alpha is common in chronic hepatitis C. Since conditions associated with an increased oxidative stress (advanced age, steatosis, fibrosis, iron overload, and alcohol consumption) reduce the likelihood of response, we hypothesized that oxidative stress may affect the antiviral actions of IFN-alpha. METHODS: We examined in a human hepatocellular carcinoma cell line (Huh-7) the effect of hydrogen peroxide (H2O2), as a generator of oxidative stress, on the IFN-alpha signaling pathway. RESULTS: Pretreatment of Huh-7 cells with 0.5-1 mM H2O2 resulted in the suppression of the IFN-alpha-induced antiviral protein MxA and of IRF-9 mRNA expression. Th…

Gene Expression Regulation ViralMyxovirus Resistance ProteinsCarcinoma HepatocellularBlotting WesternAntiviral proteinProtein tyrosine phosphataseInterferon alpha-2Biologymedicine.disease_causechemistry.chemical_compoundGTP-Binding ProteinsCell Line TumormedicineHumansRNA NeoplasmHepatologyTyk-2Reverse Transcriptase Polymerase Chain ReactionSTATLiver NeoplasmsInterferon-alphaJAK-STAT signaling pathwayTyrosine phosphorylationHydrogen PeroxideJanus Kinase 1Flow CytometryInterferon-Stimulated Gene Factor 3 gamma SubunitRecombinant ProteinsIFN-aJAK-1Oxidative StressSTAT Transcription FactorsHydrogen peroxide; IFN-a; STAT; JAK-1; Tyk-2chemistryImmunologySTAT proteinCancer researchSignal transductionTyrosine kinaseOxidative stressSignal TransductionJournal of Hepatology
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Identification and cloning of odorant binding proteins from the scarab beetle Phyllopertha diversa.

1999

Abstract Wehave identified, cloned, and characterized two odorant binding proteins from the pale brown chafer, Phyllopertha diversa. One of the proteins (OBP1, 116 amino acids long) showed high amino acid identity (>90%) to two previously identified PBPs from scarab beetles. The second protein (OBP2) showed limited sequence similarity to lepidopteran and dipteran OBPs, but contained only 133 amino acids. Both proteins showed the occurrence of six highly conserved cysteines; electrospray mass spectral data suggested they are all bound in three disulfide bonds. During purification, OBP2 separated into several isoforms; N-terminal amino acid sequencing and electrospray ionization mass spectrom…

Gene isoformOdorant bindingElectrospray ionization1Molecular Sequence DataBiophysicsPhyllopertha diversaReceptors Odorantelectrospray mass spectrometryBiochemistryBombykolbombykolpheromonechemistry.chemical_compoundconformational changeBombyx moriAnimalsAmino Acid SequenceCloning MolecularMolecular Biologychemistry.chemical_classificationCloningbiologySequence Homology Amino Acid3H)-quinazolinedionefungi3-dimethyl-2Cell Biologybiology.organism_classificationRecombinant ProteinsjaponilureAmino acidColeopteraMolecular WeightchemistryBiochemistryOdorantsPheromone4-(1HSequence AlignmentBiochemical and biophysical research communications
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Synthesis, X-ray Structure, Conformational Analysis, and DFT Studies of a Giant s-Triazine bis-Schiff Base

2021

The current work involves the synthesis of 2,2′-(6-(piperidin-1-yl)-1,3,5-triazine-2,4-diyl)bis(hydrazin-2-yl-1-ylidene))bis(methanylylidene))diphenol 4, characterization, and the DFT studies of the reported compound. The crystal unit cell parameters of 4 are a = 8.1139(2) Å, b = 11.2637(2) Å, c = 45.7836(8) Å. The unit cell volume is 4184.28(15) Å3 and Z = 4. It crystallized in the orthorhombic crystal system and Pbca space group. The O…H, N…H, C…H, H…H and C…C intermolecular contacts which affect the crystal stability were quantitatively analyzed using Hirshfeld calculations. Their percentages were calculated to be 9.8, 15.8, 23.7, 46.4, and 1.6% from the whole contacts occurred in the cr…

General Chemical EngineeringInorganic ChemistryCrystalchemistry.chemical_compounds-triazineNBOGeneral Materials Sciencebis-Schiff basetyppiyhdisteetheterosykliset yhdisteetConformational isomerismkemiallinen synteesiSchiff baseCrystallography<i>s</i>-triazineChemistryHydrogen bondtiheysfunktionaaliteoriaIntermolecular forceconformational analysisHirshfeld analysiskiteetCondensed Matter Physics<i>bis</i>-Schiff baseCrystallographyQD901-999Intramolecular forceOrthorhombic crystal systemröntgenkristallografiaNatural bond orbitalCrystals
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Synthesis, and Molecular Structure Investigations of a New s-Triazine Derivatives Incorporating Pyrazole/Piperidine/Aniline Moieties

2021

In this work, we synthesized two new s-triazine incorporates pyrazole/piperidine/aniline moieties. Molecular structure investigations in the light of X-ray crystallography combined with Hirshfeld and DFT calculations were presented. Intermolecular interactions controlling the molecular packing of 4-(3,5-dimethyl-1H-pyrazol-1-yl)-N-phenyl-6-(piperidin-1-yl)-1,3,5-triazin-2-amine; 5a and N-(4-bromophenyl)-4-(3,5-dimethyl-1H-pyrazol-1-yl)-6-(piperidin-1-yl)-1,3,5-triazin-2-amine; 5b were analyzed using Hirshfeld calculations. The most dominant interactions are the H...H, N...H and H...C contacts in both compounds. The N...H and H...C interactions in 5a and the N...H, Br...H and H...H interacti…

General Chemical EngineeringPyrazoleInorganic Chemistrychemistry.chemical_compoundsymbols.namesakeAnilines-triazinehydrazino-s-triazineComputational chemistry<i>s</i>-triazine; pyrazole; hydrazino-<i>s</i>-triazine; Hirshfeld calculationsMoleculeHirshfeld calculationsGeneral Materials Scienceheterosykliset yhdisteetDebyeTriazinekemiallinen synteesiCrystallography<i>s</i>-triazineChemical shiftIntermolecular forceCondensed Matter Physicspyrazolechemistryhydrazino-<i>s</i>-triazineQD901-999symbolsPiperidineCrystals
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The composition of data economy : a bibliometric approach and TCCM framework of conceptual, intellectual and social structure

2022

Purpose The data economy mainly relies on the surveillance capitalism business model, enabling companies to monetize their data. The surveillance allows for transforming private human experiences into behavioral data that can be harnessed in the marketing sphere. This study aims to focus on investigating the domain of data economy with the methodological lens of quantitative bibliometric analysis of published literature. Design/methodology/approach The bibliometric analysis seeks to unravel trends and timelines for the emergence of the data economy, its conceptualization, scientific progression and thematic synergy that could predict the future of the field. A total of 591 data between 200…

General Computer Sciencebig datakaupallistaminenLibrary and Information Sciencesdatatalousyksilönsuojaavoin tietodigitaalinen markkinointiyrityksetkäsiteanalyysibibliometriikka
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GDL90fuzz: Fuzzing - GDL-90 Data Interface Specification Within Aviation Software and Avionics Devices–A Cybersecurity Pentesting Perspective

2022

As the core part of next-generation air transportation systems, the Automatic Dependent Surveillance-Broadcast (ADS-B) is becoming very popular. However, many (if not most) ADS-B devices and implementations support and rely on Garmin’s GDL-90 protocol for data exchange and encapsulation. In this paper, we research GDL-90 protocol fuzzing options and demonstrate practical Denial-of-Service (DoS) attacks on popular Electronic Flight Bag (EFB) software operating on mobile devices. For this purpose, we specifically configured our own avionics pentesting platform. and targeted the popular Garmin’s GDL-90 protocol as the industry-leading devices operate on it. We captured legitimate traffic from …

General Computer Sciencecybersecurityprotocolsaerospace electronicsavionicsattacksheart beatGeneral Materials SciencelennonjohtokyberturvallisuussoftwareGeneral EngineeringlentoliikenneresiliencyfuzzingtestausmenetelmätpentestingairtrafficaviationstandardsDoSaircraftverkkohyökkäyksetlennonvarmistusGDL-90ADS-BIEEE Access
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How pedagogical agents communicate with students: A two-phase systematic review

2022

Technological advancements have improved the capabilities of pedagogical agents to communicate with students. However, an increased use of pedagogical agents in learning environments calls for a deeper understanding of student–agent communication to assess the effectiveness of pedagogical agents in learning. This study is a two-phase systematic review of scientific papers on pedagogical agent communication research published between 2010 and 2020, including review papers and original research papers. In the first phase, this study analyses literature reviews and meta-analyses to find the status and research gaps. The findings indicate that pedagogical agents' characteristics and impact on l…

General Computer Scienceihmisen ja tietokoneen vuorovaikutusSystematic literature reviewoppimisalustatEducationPedagogical agentUmbrella reviewkeskinäisviestintäHuman-machine communicationComputingMilieux_COMPUTERSANDEDUCATIONälykkäät agentitopetusteknologiaStudent-agent communicationsystemaattiset kirjallisuuskatsauksetComputers &amp; Education
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Fine mapping of the 2p11 dyslexia locus and exclusion of TACR1 as a candidate gene.

2003

Developmental dyslexia, or reading disability, is a multigenic complex disease for which at least five loci, i.e. DYX1-3 and DYX5-6, have been clearly identified from the human genome. To date, DYX1C1 is the only dyslexia candidate gene cloned. We have previously reported linkage to 2p11 and 7q32 in 11 Finnish pedigrees. Here, we report the fine mapping of the approximately 40-cM linked region from chromosome 2 as we increased marker density to one per 1.8 cM. Linkage was supported with the highest NPL score of 3.0 (P=0.001) for marker D2S2216. Association analysis using the six pedigrees showing linkage pointed to marker D2S286/rs3220265 (P value0.001) in the near vicinity of D2S2216. We w…

Genetic MarkersCandidate geneLocus (genetics)Quantitative trait locusBiologyPolymorphism Single NucleotideDyslexia03 medical and health sciences0302 clinical medicineGene mappingGenetic linkageGeneticsmedicineHumansGenetics (clinical)FinlandReceptors Tachykinin030304 developmental biologyGenetics0303 health sciencesGene Expression ProfilingHaplotypeDyslexiaChromosome Mappingmedicine.diseaseBlotting NorthernPedigreeGenetic markerChromosomes Human Pair 2030217 neurology & neurosurgeryMicrosatellite RepeatsHuman genetics
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Interactions among bacterial strains and fluke genotypes shape virulence of co-infection.

2015

Most studies of virulence of infection focus on pairwise host–parasite interactions. However, hosts are almost universally co-infected by several parasite strains and/or genotypes of the same or different species. While theory predicts that co-infection favours more virulent parasite genotypes through intensified competition for host resources, knowledge of the effects of genotype by genotype (G × G) interactions between unrelated parasite species on virulence of co-infection is limited. Here, we tested such a relationship by challenging rainbow trout with replicated bacterial strains and fluke genotypes both singly and in all possible pairwise combinations. We found that virulence (host mo…

Genotypemedia_common.quotation_subjectVirulenceDiplostomum pseudospathaceumTrematode InfectionsFlavobacteriumGeneral Biochemistry Genetics and Molecular BiologyCompetition (biology)facilitationFlavobacterium columnareFish DiseasesFlavobacteriaceae InfectionsGenotypeParasite hostingAnimalsEvolutionary dynamicsResearch ArticlesGeneral Environmental Sciencemedia_commonGeneticsGeneral Immunology and MicrobiologybiologyVirulenceHost (biology)ta1183General Medicinemultiple infectionbiology.organism_classification3. Good healthconcomitant infectionOncorhynchus mykissHost-Pathogen Interactionsta1181epidemiologyTrematodaTrematodaGeneral Agricultural and Biological SciencesFlavobacteriumProceedings. Biological sciences
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High rates of short-term dynamics of forest ecosystem services

2021

Currently, the main tools for assessing and managing ecosystem services at large scales are maps providing snapshots of their potential supply. However, many ecosystems change over short timescales; thus, such maps soon become inaccurate. Here we show high rates of short-term dynamics of three key forest ecosystem services: wood production, bilberry production and topsoil carbon storage. Almost 85% of the coldspots and 65% of the hotspots for these services had changed into a different state over a ten-year period. Wood production showed higher rates of short-term dynamics than bilberry production and carbon storage. The high rates of dynamics mean that static snapshot ecosystem service map…

Geography Planning and DevelopmentBiodiversityluonnonmarjatpaikkatietoanalyysiManagement Monitoring Policy and LawEcosystem servicesboreal ecologyForest ecologyProduction (economics)EcosystemNature and Landscape ConservationGlobal and Planetary ChangeTopsoilEcologyWood productionRenewable Energy Sustainability and the Environmentbusiness.industrymetsäekologiaEnvironmental resource managementhiilensidontametsätTerm (time)Urban Studiespuuntuotantoekosysteemipalvelutboreaalinen vyöhykeEnvironmental scienceecosystem servicesbusinessFood ScienceNature Sustainability
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